BLASTX nr result

ID: Coptis23_contig00001770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001770
         (1250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544361.1| PREDICTED: potassium channel SKOR-like [Glyc...   547   e-153
ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glyc...   544   e-152
ref|XP_002301665.1| predicted protein [Populus trichocarpa] gi|2...   538   e-151
ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|2...   532   e-149
emb|CAC10514.1| outwardly rectifying potassium channel [Samanea ...   522   e-146

>ref|XP_003544361.1| PREDICTED: potassium channel SKOR-like [Glycine max]
          Length = 850

 Score =  547 bits (1409), Expect = e-153
 Identities = 258/335 (77%), Positives = 300/335 (89%)
 Frame = +1

Query: 244  RNRIISSQGSRFKLITNEFGLRWDRRRFVSGSVMNGIRGFSKDFVINPDNRYYHIWTHII 423
            R+R+ SS+GSRF LI N+ GL     +F   ++++GIRGFS DFVI+PDNR+Y  WT  I
Sbjct: 54   RDRLKSSRGSRFDLIENQLGLNSTWSKFSRQALLHGIRGFSVDFVIHPDNRWYRAWTKFI 113

Query: 424  LIWAVYSSFFTPIEFGFFRGLPKDLSFLDITGQVAFLIDIVVNFFLAYRDSETYLMVYKR 603
            L+WAVYSSFFTP+EFGFFRGLP++L  LDI GQ+AFL+DIV+ FF+AYRDS+TY  VYKR
Sbjct: 114  LLWAVYSSFFTPMEFGFFRGLPENLFILDIIGQIAFLVDIVLQFFVAYRDSQTYRTVYKR 173

Query: 604  TPIALRYLKSNFIFDFLGCLPWDVIYRVSGRKEEVRYLLWLRLTRVRKMTDFFQKMEKDI 783
            TPIALRYLKSNFIFD LGC+PWD+IY+  GRKEEVRYLLW+RL RVRK+TDFF K+EKDI
Sbjct: 174  TPIALRYLKSNFIFDLLGCMPWDIIYKACGRKEEVRYLLWIRLYRVRKVTDFFHKLEKDI 233

Query: 784  RINYLFTRIVKLIAVELYCTHTAACIFYYLATTLPPSHEGYTWIGSLKLGDYSYSNFREI 963
            R+NY+ TRIVKLI VELYCTHTAACIFYYLATTLP S EGYTWIGSLKLGD+SYS+FREI
Sbjct: 234  RVNYIITRIVKLIVVELYCTHTAACIFYYLATTLPESQEGYTWIGSLKLGDFSYSHFREI 293

Query: 964  DLGKRYLTSLYFAIVTMATVGCGDIHAVNIREMIFVMIYVSFDMIIGAYLIGNMTALIVK 1143
            DL KRY TSLYFAIVTMATVG GDIHAVN+REM+F+M+YVSFDMI+GAYLIGNMTALIVK
Sbjct: 294  DLWKRYTTSLYFAIVTMATVGYGDIHAVNMREMVFIMVYVSFDMILGAYLIGNMTALIVK 353

Query: 1144 GSKTERFRDKMTDMIKYMNRNKLGKDIRDQIKGHL 1248
            GSKTE+FRDKMTD++KYMNRN+LG+DIR+QIKGH+
Sbjct: 354  GSKTEKFRDKMTDLMKYMNRNRLGRDIREQIKGHV 388


>ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glycine max]
          Length = 849

 Score =  544 bits (1401), Expect = e-152
 Identities = 259/339 (76%), Positives = 301/339 (88%), Gaps = 4/339 (1%)
 Frame = +1

Query: 244  RNRIISSQGSRFKLITNEFGLRWDRRRFVSGSVMNGIRGFS----KDFVINPDNRYYHIW 411
            R+R+ SSQGS F LI N+ GL     +F   ++++GIRGFS    KDFVI+PDNR+Y  W
Sbjct: 49   RDRLKSSQGSMFNLIENQLGLNSTWSKFSRQALLHGIRGFSMDLVKDFVIHPDNRWYRAW 108

Query: 412  THIILIWAVYSSFFTPIEFGFFRGLPKDLSFLDITGQVAFLIDIVVNFFLAYRDSETYLM 591
            T+ IL+WAVYSSFFTP+EFGFFRGLP++L  LDI GQ+AFL+DIV+ FF+AYRDS+TY M
Sbjct: 109  TNFILVWAVYSSFFTPMEFGFFRGLPENLFILDIIGQIAFLVDIVLQFFVAYRDSQTYRM 168

Query: 592  VYKRTPIALRYLKSNFIFDFLGCLPWDVIYRVSGRKEEVRYLLWLRLTRVRKMTDFFQKM 771
            VYKRTPIALRYLKSNFIFD LGC+PWD+IY+  GRKEEVRYLLW+RL RVRK+ DFF K+
Sbjct: 169  VYKRTPIALRYLKSNFIFDLLGCMPWDIIYKACGRKEEVRYLLWIRLYRVRKVEDFFHKL 228

Query: 772  EKDIRINYLFTRIVKLIAVELYCTHTAACIFYYLATTLPPSHEGYTWIGSLKLGDYSYSN 951
            EKDIR+NY+ TRIVKLI VELYCTHTAACIFYYLATTLP S EGYTWIGSLKLGD+SYS+
Sbjct: 229  EKDIRVNYIITRIVKLIVVELYCTHTAACIFYYLATTLPESQEGYTWIGSLKLGDFSYSH 288

Query: 952  FREIDLGKRYLTSLYFAIVTMATVGCGDIHAVNIREMIFVMIYVSFDMIIGAYLIGNMTA 1131
            FREIDL KRY TSLYFAIVTMATVG GD+HAVN+REMIF+M+YVSFDMI+GAYLIGNMTA
Sbjct: 289  FREIDLWKRYTTSLYFAIVTMATVGYGDMHAVNMREMIFIMVYVSFDMILGAYLIGNMTA 348

Query: 1132 LIVKGSKTERFRDKMTDMIKYMNRNKLGKDIRDQIKGHL 1248
            LIVKGSKTE+FRDKMTD++KYMNRN+LG+DIR+QIKGH+
Sbjct: 349  LIVKGSKTEKFRDKMTDLMKYMNRNRLGRDIREQIKGHV 387


>ref|XP_002301665.1| predicted protein [Populus trichocarpa] gi|222843391|gb|EEE80938.1|
            predicted protein [Populus trichocarpa]
          Length = 841

 Score =  538 bits (1387), Expect = e-151
 Identities = 262/345 (75%), Positives = 299/345 (86%), Gaps = 10/345 (2%)
 Frame = +1

Query: 244  RNRIISSQGSRFKLITNEFGL----------RWDRRRFVSGSVMNGIRGFSKDFVINPDN 393
            ++RI SS+GSRF LI  EFGL           W RR+    SV+NGIR  S  FVI+PDN
Sbjct: 30   KDRIKSSRGSRFNLIEKEFGLVNNNGSSSMTSW-RRKLSRESVINGIRYVSSGFVIHPDN 88

Query: 394  RYYHIWTHIILIWAVYSSFFTPIEFGFFRGLPKDLSFLDITGQVAFLIDIVVNFFLAYRD 573
            R+Y  WT  IL+WAVYSSFFTP+EFGFFRGLP++L  LDI GQVAFL+DI++ FF+AYRD
Sbjct: 89   RWYRAWTKFILLWAVYSSFFTPMEFGFFRGLPENLFILDIVGQVAFLLDIILQFFIAYRD 148

Query: 574  SETYLMVYKRTPIALRYLKSNFIFDFLGCLPWDVIYRVSGRKEEVRYLLWLRLTRVRKMT 753
            S+TY  VYKRTPIALRYLKS+FI D L CLPWD+IY+  G +EEVRYLLW+RL+RVRK+T
Sbjct: 149  SQTYRTVYKRTPIALRYLKSHFIIDLLACLPWDIIYKACGHREEVRYLLWIRLSRVRKVT 208

Query: 754  DFFQKMEKDIRINYLFTRIVKLIAVELYCTHTAACIFYYLATTLPPSHEGYTWIGSLKLG 933
            DFFQKMEKDIRINYLFTRIVKLI VELYCTHTAACIFY+LATTLP S EGYTWIGSLK+G
Sbjct: 209  DFFQKMEKDIRINYLFTRIVKLIVVELYCTHTAACIFYHLATTLPSSQEGYTWIGSLKMG 268

Query: 934  DYSYSNFREIDLGKRYLTSLYFAIVTMATVGCGDIHAVNIREMIFVMIYVSFDMIIGAYL 1113
            DYSY++FREID+ KRY TSLYFA++TMATVG GDIHAVN+REMIFVMIYVSFDMI+GAYL
Sbjct: 269  DYSYTSFREIDIWKRYTTSLYFAVITMATVGYGDIHAVNLREMIFVMIYVSFDMILGAYL 328

Query: 1114 IGNMTALIVKGSKTERFRDKMTDMIKYMNRNKLGKDIRDQIKGHL 1248
            IGNMTALIVKGSKTE+FRDKMTD+IKYMNRN+LGKDIR+QIKGH+
Sbjct: 329  IGNMTALIVKGSKTEKFRDKMTDLIKYMNRNRLGKDIRNQIKGHV 373


>ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|222848858|gb|EEE86405.1|
            predicted protein [Populus trichocarpa]
          Length = 821

 Score =  532 bits (1370), Expect = e-149
 Identities = 258/344 (75%), Positives = 299/344 (86%), Gaps = 9/344 (2%)
 Frame = +1

Query: 244  RNRIISSQGSRFKLITNEFGLRWD---------RRRFVSGSVMNGIRGFSKDFVINPDNR 396
            R+RI SS+GSRF L+ NEFGL  +         RR+    SV+NGIR  S    I+PDNR
Sbjct: 18   RDRIKSSRGSRFNLLENEFGLVNNTESSLITNLRRKLSRESVINGIRYVSTGPAIHPDNR 77

Query: 397  YYHIWTHIILIWAVYSSFFTPIEFGFFRGLPKDLSFLDITGQVAFLIDIVVNFFLAYRDS 576
            +Y  WT  IL+WAVYSSFFTP+EFGFFRGLP++L  +DI GQVAFL+DIV+ FF+AYRDS
Sbjct: 78   WYRAWTIFILLWAVYSSFFTPMEFGFFRGLPENLFIMDIVGQVAFLLDIVLQFFVAYRDS 137

Query: 577  ETYLMVYKRTPIALRYLKSNFIFDFLGCLPWDVIYRVSGRKEEVRYLLWLRLTRVRKMTD 756
            +TY M+YKR+PIALRYLKS+FI D LGCLPWD+I++V GR+EEVRYLLW+RL+RVRK+T 
Sbjct: 138  QTYRMIYKRSPIALRYLKSHFIIDLLGCLPWDIIFKVCGRREEVRYLLWIRLSRVRKVTS 197

Query: 757  FFQKMEKDIRINYLFTRIVKLIAVELYCTHTAACIFYYLATTLPPSHEGYTWIGSLKLGD 936
            FFQK+EKDIRINYLFTRIVKLI VELYCTHTAACIFYYLATTLP SHEGYTWIGSLK+G 
Sbjct: 198  FFQKLEKDIRINYLFTRIVKLIVVELYCTHTAACIFYYLATTLPASHEGYTWIGSLKMGG 257

Query: 937  YSYSNFREIDLGKRYLTSLYFAIVTMATVGCGDIHAVNIREMIFVMIYVSFDMIIGAYLI 1116
            Y+Y+NFREID+  RY TSLYFA+VTMATVG GDIHAVN+REMIFVMI+VSFDMI+GAYLI
Sbjct: 258  YNYTNFREIDIWMRYTTSLYFAVVTMATVGYGDIHAVNLREMIFVMIFVSFDMILGAYLI 317

Query: 1117 GNMTALIVKGSKTERFRDKMTDMIKYMNRNKLGKDIRDQIKGHL 1248
            GNMTA+ VKGSKTE+FRDKMTD+IKYMNRN+LGKDIR+QIKGHL
Sbjct: 318  GNMTAITVKGSKTEKFRDKMTDLIKYMNRNRLGKDIRNQIKGHL 361


>emb|CAC10514.1| outwardly rectifying potassium channel [Samanea saman]
          Length = 841

 Score =  522 bits (1345), Expect = e-146
 Identities = 253/336 (75%), Positives = 298/336 (88%), Gaps = 1/336 (0%)
 Frame = +1

Query: 244  RNRIISSQGSRFKLITNEFGLRWDRRRFVSGSVMNGIRGFSKDFVINPD-NRYYHIWTHI 420
            R+R+ SS+GSRF+LI +E  L+   +R +S  V++GIRGFSKDF+I+P+ NR+Y  WT  
Sbjct: 45   RDRLKSSRGSRFRLIEDE--LKELNQRKLSRYVLDGIRGFSKDFIIHPEKNRWYQAWTKF 102

Query: 421  ILIWAVYSSFFTPIEFGFFRGLPKDLSFLDITGQVAFLIDIVVNFFLAYRDSETYLMVYK 600
            IL+WA+YSSFFTP+EFGFFRGL KDL  LDI GQVAFL+DIVV F LAYRDS+TY M+YK
Sbjct: 103  ILLWAIYSSFFTPMEFGFFRGLDKDLFILDIIGQVAFLVDIVVQFCLAYRDSQTYRMIYK 162

Query: 601  RTPIALRYLKSNFIFDFLGCLPWDVIYRVSGRKEEVRYLLWLRLTRVRKMTDFFQKMEKD 780
             + IALRYLKS+FIFD LGC+PWD+IY+ SGRKE VRYLL +RL RVRK+ +FFQ+MEKD
Sbjct: 163  PSSIALRYLKSSFIFDLLGCMPWDIIYKASGRKEGVRYLLLIRLYRVRKVIEFFQRMEKD 222

Query: 781  IRINYLFTRIVKLIAVELYCTHTAACIFYYLATTLPPSHEGYTWIGSLKLGDYSYSNFRE 960
            IRINY+FTRIVKL+ VELYCTHTAACIFYYLATTLP S EGYTWIGSLKLGDYSY NFR+
Sbjct: 223  IRINYMFTRIVKLLVVELYCTHTAACIFYYLATTLPASQEGYTWIGSLKLGDYSYMNFRD 282

Query: 961  IDLGKRYLTSLYFAIVTMATVGCGDIHAVNIREMIFVMIYVSFDMIIGAYLIGNMTALIV 1140
            IDL KRY TSLYFAIVTMATVG GDIHAVN+REMIF+MIYVSFDM++GAYLIGNMTALIV
Sbjct: 283  IDLWKRYTTSLYFAIVTMATVGYGDIHAVNMREMIFIMIYVSFDMVLGAYLIGNMTALIV 342

Query: 1141 KGSKTERFRDKMTDMIKYMNRNKLGKDIRDQIKGHL 1248
            KGSKTE+FRD+MTD++KYMNRN+LG+DIR+Q+K H+
Sbjct: 343  KGSKTEKFRDRMTDLLKYMNRNRLGRDIREQLKSHM 378


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