BLASTX nr result
ID: Coptis23_contig00001744
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001744
(943 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268449.2| PREDICTED: protein YIF1B [Vitis vinifera] 368 1e-99
emb|CBI36691.3| unnamed protein product [Vitis vinifera] 368 1e-99
ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis] g... 363 2e-98
ref|XP_004152088.1| PREDICTED: protein YIF1B-A-like [Cucumis sat... 361 1e-97
ref|NP_001242205.1| uncharacterized protein LOC100799056 [Glycin... 361 2e-97
>ref|XP_002268449.2| PREDICTED: protein YIF1B [Vitis vinifera]
Length = 348
Score = 368 bits (944), Expect = 1e-99
Identities = 173/229 (75%), Positives = 196/229 (85%)
Frame = +1
Query: 1 GIIRDGLGAYGERILGSSTEYVQSNVTKYFSDPQYYFQVNGQYVRNKLKVILFPFLHRGH 180
G+IR GLGAYGE+ILGSS+EYVQSN+++YFSDPQYYFQVN YVRNKLKV+LFPFLHRGH
Sbjct: 112 GLIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGH 171
Query: 181 WTRITEPVGGRLSYKPPALDINAPDMYIPLMSFGTYVVLAGFTLGLIGKFSPEALSLQFT 360
WTRITEPVGGRLSYKPP DINAPD+YIP M+FGTYV+LAG +LGL GKF+PEAL+ F
Sbjct: 172 WTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVILAGLSLGLRGKFTPEALNWLFI 231
Query: 361 KGXXXXXXXXXXXKVSLYSLGSGEAPLLDIVAYAGYAFTGMCVPVMGRIMWSYSYYFLMP 540
KG KVSL SLGSGEAPLLDIVAYAGY FTGMC+ V GRI WSYSYYFLMP
Sbjct: 232 KGLVGWCLQVSLLKVSLLSLGSGEAPLLDIVAYAGYTFTGMCLAVFGRIAWSYSYYFLMP 291
Query: 541 FMCLCMGVFLVKTVKRILFAEIRSYDSSKQNYALLFMA*AQFPFFMWLG 687
+ CLCMG+FLVKT+KR+LFAE+RSYDSS+ +Y LLF+A AQ P F+WLG
Sbjct: 292 WACLCMGIFLVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQLPLFIWLG 340
>emb|CBI36691.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 368 bits (944), Expect = 1e-99
Identities = 173/229 (75%), Positives = 196/229 (85%)
Frame = +1
Query: 1 GIIRDGLGAYGERILGSSTEYVQSNVTKYFSDPQYYFQVNGQYVRNKLKVILFPFLHRGH 180
G+IR GLGAYGE+ILGSS+EYVQSN+++YFSDPQYYFQVN YVRNKLKV+LFPFLHRGH
Sbjct: 101 GLIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGH 160
Query: 181 WTRITEPVGGRLSYKPPALDINAPDMYIPLMSFGTYVVLAGFTLGLIGKFSPEALSLQFT 360
WTRITEPVGGRLSYKPP DINAPD+YIP M+FGTYV+LAG +LGL GKF+PEAL+ F
Sbjct: 161 WTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVILAGLSLGLRGKFTPEALNWLFI 220
Query: 361 KGXXXXXXXXXXXKVSLYSLGSGEAPLLDIVAYAGYAFTGMCVPVMGRIMWSYSYYFLMP 540
KG KVSL SLGSGEAPLLDIVAYAGY FTGMC+ V GRI WSYSYYFLMP
Sbjct: 221 KGLVGWCLQVSLLKVSLLSLGSGEAPLLDIVAYAGYTFTGMCLAVFGRIAWSYSYYFLMP 280
Query: 541 FMCLCMGVFLVKTVKRILFAEIRSYDSSKQNYALLFMA*AQFPFFMWLG 687
+ CLCMG+FLVKT+KR+LFAE+RSYDSS+ +Y LLF+A AQ P F+WLG
Sbjct: 281 WACLCMGIFLVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQLPLFIWLG 329
>ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis]
gi|223525796|gb|EEF28242.1| Protein YIF1A, putative
[Ricinus communis]
Length = 269
Score = 363 bits (933), Expect = 2e-98
Identities = 171/229 (74%), Positives = 196/229 (85%)
Frame = +1
Query: 1 GIIRDGLGAYGERILGSSTEYVQSNVTKYFSDPQYYFQVNGQYVRNKLKVILFPFLHRGH 180
G+IR GLGAYGE+ILGSS+EYVQSN+++YFSDPQYYFQVN QYVRNKLKV+LFPFLHRGH
Sbjct: 33 GLIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGH 92
Query: 181 WTRITEPVGGRLSYKPPALDINAPDMYIPLMSFGTYVVLAGFTLGLIGKFSPEALSLQFT 360
WTRITEPVGGRLSYKPP DINAPD+YIP M+FGTY+VLAG +LGL GKFSPE L+ F
Sbjct: 93 WTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYIVLAGLSLGLNGKFSPENLNWLFV 152
Query: 361 KGXXXXXXXXXXXKVSLYSLGSGEAPLLDIVAYAGYAFTGMCVPVMGRIMWSYSYYFLMP 540
KG KV+L SLGSGEAPLLDIVAYAGY FTGMC+ V+GRI +YSYYFLMP
Sbjct: 153 KGLLGWFMQVALLKVTLLSLGSGEAPLLDIVAYAGYTFTGMCIAVLGRIFINYSYYFLMP 212
Query: 541 FMCLCMGVFLVKTVKRILFAEIRSYDSSKQNYALLFMA*AQFPFFMWLG 687
+ CLCMG+FLVKT+KR+LFAE+R+YDSS+ +Y LLF+A AQFP F WLG
Sbjct: 213 WACLCMGIFLVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLG 261
>ref|XP_004152088.1| PREDICTED: protein YIF1B-A-like [Cucumis sativus]
gi|449502274|ref|XP_004161595.1| PREDICTED: protein
YIF1B-A-like [Cucumis sativus]
Length = 269
Score = 361 bits (927), Expect = 1e-97
Identities = 170/229 (74%), Positives = 196/229 (85%)
Frame = +1
Query: 1 GIIRDGLGAYGERILGSSTEYVQSNVTKYFSDPQYYFQVNGQYVRNKLKVILFPFLHRGH 180
G+IR GLGAYGE+I GSS+EYVQSN+++YFSDPQYYFQVN QYVRNKLKV+LFPFLHRGH
Sbjct: 33 GLIRGGLGAYGEKIFGSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGH 92
Query: 181 WTRITEPVGGRLSYKPPALDINAPDMYIPLMSFGTYVVLAGFTLGLIGKFSPEALSLQFT 360
WTRIT+P+GGRLSYKPP DINAPD+YIP M+FGTYVVLAGF+LGL GKF+PEALS F
Sbjct: 93 WTRITDPIGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGKFTPEALSWLFI 152
Query: 361 KGXXXXXXXXXXXKVSLYSLGSGEAPLLDIVAYAGYAFTGMCVPVMGRIMWSYSYYFLMP 540
KG KV+L SLGSGEAPLLDIVAYAGYAFTG+C+ +GRI YSYYFLMP
Sbjct: 153 KGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMP 212
Query: 541 FMCLCMGVFLVKTVKRILFAEIRSYDSSKQNYALLFMA*AQFPFFMWLG 687
+M LCMG+FLVKT+KR+LFAE+R+YDSS+ +Y LLF+A AQFP F WLG
Sbjct: 213 WMALCMGIFLVKTMKRVLFAEVRTYDSSRHHYLLLFIALAQFPLFTWLG 261
>ref|NP_001242205.1| uncharacterized protein LOC100799056 [Glycine max]
gi|255641178|gb|ACU20866.1| unknown [Glycine max]
Length = 269
Score = 361 bits (926), Expect = 2e-97
Identities = 170/229 (74%), Positives = 196/229 (85%)
Frame = +1
Query: 1 GIIRDGLGAYGERILGSSTEYVQSNVTKYFSDPQYYFQVNGQYVRNKLKVILFPFLHRGH 180
G+IR GLGAYG +ILGSS+EYVQSN+++YFSDPQYYFQVN QYV+NKLKV+L PFLHRGH
Sbjct: 33 GLIRGGLGAYGGKILGSSSEYVQSNISRYFSDPQYYFQVNDQYVKNKLKVVLLPFLHRGH 92
Query: 181 WTRITEPVGGRLSYKPPALDINAPDMYIPLMSFGTYVVLAGFTLGLIGKFSPEALSLQFT 360
WTRITEPVGGRLSYKPP DINAPD+YIPLM+FGTYV+LAG +LGL GKFSPEAL+L F
Sbjct: 93 WTRITEPVGGRLSYKPPIYDINAPDLYIPLMAFGTYVILAGLSLGLHGKFSPEALNLLFI 152
Query: 361 KGXXXXXXXXXXXKVSLYSLGSGEAPLLDIVAYAGYAFTGMCVPVMGRIMWSYSYYFLMP 540
KG KV+L SLGSGEAPLLDI+AYAGY FTG+C+ V+GRI+ YSYYFLMP
Sbjct: 153 KGLLGWFMQAALPKVTLLSLGSGEAPLLDIIAYAGYTFTGICLAVLGRIILGYSYYFLMP 212
Query: 541 FMCLCMGVFLVKTVKRILFAEIRSYDSSKQNYALLFMA*AQFPFFMWLG 687
+ CLCMGVFLVKT+KR+LFAE+RSYDSS+ +Y LLF+A QFP F WLG
Sbjct: 213 WTCLCMGVFLVKTMKRVLFAEVRSYDSSRHHYLLLFIALVQFPLFTWLG 261