BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001734
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS01974.1| putative chloroplastic RNA-binding protein, with ...   276   2e-72
gb|EEC76567.1| hypothetical protein OsI_14395 [Oryza sativa Indi...   275   7e-72
ref|XP_003559110.1| PREDICTED: pentatricopeptide repeat-containi...   274   1e-71
ref|NP_001236252.1| uncharacterized protein LOC100305755 [Glycin...   272   3e-71
gb|AFK35423.1| unknown [Lotus japonicus]                              271   8e-71

>gb|AAS01974.1| putative chloroplastic RNA-binding protein, with alternative splicing
            isoforms [Oryza sativa Japonica Group]
            gi|108712189|gb|ABF99984.1| pentatricopeptide, putative,
            expressed [Oryza sativa Japonica Group]
          Length = 884

 Score =  276 bits (707), Expect = 2e-72
 Identities = 130/147 (88%), Positives = 143/147 (97%)
 Frame = +1

Query: 4    KMILAVLFSNSEGNILVERFHGVPSEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVY 183
            KMILAVLFSNS+GNIL+ERFHGVP+EERLHWRSFLVKLGADNLKGAKNEEL VASHKSV 
Sbjct: 737  KMILAVLFSNSDGNILIERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELLVASHKSVS 796

Query: 184  IVYTVLGDVCIYVVGKDDYDELALSEVIFVITSAVKDVCGKPPTERLFLDKYGRICLCLD 363
            IVYT++GDVC+Y+VGKD+YDELAL+EVIF ITSAVKDVCGKPPTERLFLDKYGRICLCLD
Sbjct: 797  IVYTMIGDVCLYIVGKDEYDELALAEVIFAITSAVKDVCGKPPTERLFLDKYGRICLCLD 856

Query: 364  EIVWKGMLENTDKDRIRRLIRLKPPTD 444
            EIVWKG+LENT+KDR+RRLIRLKPP +
Sbjct: 857  EIVWKGLLENTEKDRVRRLIRLKPPVE 883


>gb|EEC76567.1| hypothetical protein OsI_14395 [Oryza sativa Indica Group]
           gi|222626199|gb|EEE60331.1| hypothetical protein
           OsJ_13429 [Oryza sativa Japonica Group]
          Length = 147

 Score =  275 bits (702), Expect = 7e-72
 Identities = 129/146 (88%), Positives = 142/146 (97%)
 Frame = +1

Query: 7   MILAVLFSNSEGNILVERFHGVPSEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYI 186
           MILAVLFSNS+GNIL+ERFHGVP+EERLHWRSFLVKLGADNLKGAKNEEL VASHKSV I
Sbjct: 1   MILAVLFSNSDGNILIERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELLVASHKSVSI 60

Query: 187 VYTVLGDVCIYVVGKDDYDELALSEVIFVITSAVKDVCGKPPTERLFLDKYGRICLCLDE 366
           VYT++GDVC+Y+VGKD+YDELAL+EVIF ITSAVKDVCGKPPTERLFLDKYGRICLCLDE
Sbjct: 61  VYTMIGDVCLYIVGKDEYDELALAEVIFAITSAVKDVCGKPPTERLFLDKYGRICLCLDE 120

Query: 367 IVWKGMLENTDKDRIRRLIRLKPPTD 444
           IVWKG+LENT+KDR+RRLIRLKPP +
Sbjct: 121 IVWKGLLENTEKDRVRRLIRLKPPVE 146


>ref|XP_003559110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
            chloroplastic-like [Brachypodium distachyon]
          Length = 875

 Score =  274 bits (700), Expect = 1e-71
 Identities = 127/148 (85%), Positives = 144/148 (97%)
 Frame = +1

Query: 1    KKMILAVLFSNSEGNILVERFHGVPSEERLHWRSFLVKLGADNLKGAKNEELFVASHKSV 180
            +KMILAVLF+NS+GNIL+ERFHGVP+EERLHWRSFLVKLG++NLKGAKNEEL VASHKSV
Sbjct: 727  EKMILAVLFANSDGNILIERFHGVPAEERLHWRSFLVKLGSENLKGAKNEELLVASHKSV 786

Query: 181  YIVYTVLGDVCIYVVGKDDYDELALSEVIFVITSAVKDVCGKPPTERLFLDKYGRICLCL 360
             IVYT++GDVC+Y+VGKD+YDELALSEVIF +TSAVKDVCGKPPTERLFLDKYGRICLCL
Sbjct: 787  SIVYTMIGDVCLYIVGKDEYDELALSEVIFAVTSAVKDVCGKPPTERLFLDKYGRICLCL 846

Query: 361  DEIVWKGMLENTDKDRIRRLIRLKPPTD 444
            DEIVWKG+LENT+KDR+RRLIRLKPP +
Sbjct: 847  DEIVWKGLLENTEKDRVRRLIRLKPPVE 874


>ref|NP_001236252.1| uncharacterized protein LOC100305755 [Glycine max]
           gi|255626529|gb|ACU13609.1| unknown [Glycine max]
          Length = 147

 Score =  272 bits (696), Expect = 3e-71
 Identities = 131/146 (89%), Positives = 141/146 (96%)
 Frame = +1

Query: 7   MILAVLFSNSEGNILVERFHGVPSEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYI 186
           MILAVLF+N+EGNIL+ERFHGVP+EERLHWRSFLVKLGADNLKG KNEEL VA HKSVYI
Sbjct: 1   MILAVLFANAEGNILIERFHGVPAEERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYI 60

Query: 187 VYTVLGDVCIYVVGKDDYDELALSEVIFVITSAVKDVCGKPPTERLFLDKYGRICLCLDE 366
           VYTVLGDV IYVVGKD+YDELALSEVIFVITSAVKDVCGKPP+ERLFLDKYGRICLCLDE
Sbjct: 61  VYTVLGDVSIYVVGKDEYDELALSEVIFVITSAVKDVCGKPPSERLFLDKYGRICLCLDE 120

Query: 367 IVWKGMLENTDKDRIRRLIRLKPPTD 444
           IVW+G LENT+KDRI+RLIRLKPPT+
Sbjct: 121 IVWQGYLENTEKDRIKRLIRLKPPTE 146


>gb|AFK35423.1| unknown [Lotus japonicus]
          Length = 147

 Score =  271 bits (693), Expect = 8e-71
 Identities = 129/146 (88%), Positives = 140/146 (95%)
 Frame = +1

Query: 7   MILAVLFSNSEGNILVERFHGVPSEERLHWRSFLVKLGADNLKGAKNEELFVASHKSVYI 186
           MILAVLF+N+EGNIL+ERFHGVP+EERLHWRSFLVKLGADNLKG KNEEL VA HKSVYI
Sbjct: 1   MILAVLFANAEGNILIERFHGVPAEERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYI 60

Query: 187 VYTVLGDVCIYVVGKDDYDELALSEVIFVITSAVKDVCGKPPTERLFLDKYGRICLCLDE 366
           VYTVLGDV IYVVGKD+YDELALSEVIFVITSAVKD+CGKPPTER+FLDKYGRICLCLDE
Sbjct: 61  VYTVLGDVSIYVVGKDEYDELALSEVIFVITSAVKDICGKPPTERVFLDKYGRICLCLDE 120

Query: 367 IVWKGMLENTDKDRIRRLIRLKPPTD 444
           IVWKG LENT+ DRI+RL+RLKPPT+
Sbjct: 121 IVWKGYLENTENDRIKRLLRLKPPTE 146