BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001719
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35582.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containi...   154   9e-36
ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi...   154   9e-36
ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34

>emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  159 bits (403), Expect = 2e-37
 Identities = 68/100 (68%), Positives = 85/100 (85%)
 Frame = -1

Query: 365 PDANIWGALLGACRVYGNLELGRWAAEHLFELKPEHSGNYLLLANMYAESGEWDESDKIR 186
           PDANIWGALLGACR+YGNLEL  WAAEHLFELKPEHSG Y LL+NMYAE+G WDE+++IR
Sbjct: 510 PDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIR 569

Query: 185 KMMKSKRTEKNPGCSWV*VHNRVHAFAVGESLQDQEVGLW 66
           ++MKS+  +K+PGCSWV +  + HAF VGE ++  ++GLW
Sbjct: 570 ELMKSRGVKKSPGCSWVQIGEQAHAFVVGEKIEGLDLGLW 609


>ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  154 bits (388), Expect = 9e-36
 Identities = 67/102 (65%), Positives = 87/102 (85%)
 Frame = -1

Query: 365 PDANIWGALLGACRVYGNLELGRWAAEHLFELKPEHSGNYLLLANMYAESGEWDESDKIR 186
           PDANIWGALLGACR+YGN+ELGR AAEHLFELKP+H G Y+LL+N+YAE+G WDE++KIR
Sbjct: 580 PDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIR 639

Query: 185 KMMKSKRTEKNPGCSWV*VHNRVHAFAVGESLQDQEVGLWSA 60
           ++MKS+  +KNPGCSWV ++++VHAF   E ++  E+G W A
Sbjct: 640 ELMKSRGAKKNPGCSWVQIYDQVHAFVAEERVEGFELGDWLA 681


>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  154 bits (388), Expect = 9e-36
 Identities = 67/102 (65%), Positives = 87/102 (85%)
 Frame = -1

Query: 365  PDANIWGALLGACRVYGNLELGRWAAEHLFELKPEHSGNYLLLANMYAESGEWDESDKIR 186
            PDANIWGALLGACR+YGN+ELGR AAEHLFELKP+H G Y+LL+N+YAE+G WDE++KIR
Sbjct: 729  PDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIR 788

Query: 185  KMMKSKRTEKNPGCSWV*VHNRVHAFAVGESLQDQEVGLWSA 60
            ++MKS+  +KNPGCSWV ++++VHAF   E ++  E+G W A
Sbjct: 789  ELMKSRGAKKNPGCSWVQIYDQVHAFVAEERVEGFELGDWLA 830


>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 813

 Score =  149 bits (377), Expect = 2e-34
 Identities = 64/100 (64%), Positives = 81/100 (81%)
 Frame = -1

Query: 365  PDANIWGALLGACRVYGNLELGRWAAEHLFELKPEHSGNYLLLANMYAESGEWDESDKIR 186
            PD NIWGALLGACR++GN+ELG WAAEHLFELKP+H G Y+LL+NMYAE+  WDE++K+R
Sbjct: 709  PDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVR 768

Query: 185  KMMKSKRTEKNPGCSWV*VHNRVHAFAVGESLQDQEVGLW 66
            ++MKS+  +KNPGCSWV V + VHAF VGE +   +   W
Sbjct: 769  ELMKSRGAKKNPGCSWVQVGDLVHAFLVGEKIDSLDDDFW 808


>ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|222849681|gb|EEE87228.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score =  147 bits (372), Expect = 7e-34
 Identities = 62/102 (60%), Positives = 84/102 (82%)
 Frame = -1

Query: 365 PDANIWGALLGACRVYGNLELGRWAAEHLFELKPEHSGNYLLLANMYAESGEWDESDKIR 186
           PDAN+WGALLGACR++G +EL  WAAEHLF+LKP+HSG Y +L+NMYAE+G+WDE++++R
Sbjct: 577 PDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVR 636

Query: 185 KMMKSKRTEKNPGCSWV*VHNRVHAFAVGESLQDQEVGLWSA 60
           K+MKS+  +KNPGCSWV + N+VHAF  GE + + +  L  A
Sbjct: 637 KLMKSRGAKKNPGCSWVQIDNQVHAFVAGERMMNVDSSLLCA 678