BLASTX nr result

ID: Coptis23_contig00001705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001705
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299315.1| predicted protein [Populus trichocarpa] gi|1...   107   3e-21
ref|XP_002270801.2| PREDICTED: uncharacterized protein LOC100243...   107   5e-21
gb|ACH87180.1| unknown protein [Camellia sinensis]                    107   5e-21
ref|XP_003553165.1| PREDICTED: uncharacterized protein LOC100799...   104   3e-20
ref|XP_002514895.1| conserved hypothetical protein [Ricinus comm...   100   8e-19

>ref|XP_002299315.1| predicted protein [Populus trichocarpa] gi|118486493|gb|ABK95086.1|
           unknown [Populus trichocarpa]
           gi|118489282|gb|ABK96446.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222846573|gb|EEE84120.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  107 bits (268), Expect = 3e-21
 Identities = 61/122 (50%), Positives = 80/122 (65%), Gaps = 8/122 (6%)
 Frame = -2

Query: 675 QNEQQTNKAFNELCTLVLNILGSP-PLNNNT---IPSSSHRTLSKQVSAAEFASXXXXXX 508
           QN+ Q ++ F EL  LVLN+L SP P++ +    +P++  R    +++ A FAS      
Sbjct: 5   QNQDQQSRVFEELSALVLNLLRSPTPVSFSDQIPMPTTPVRRRLPEITPAGFASLLLGMS 64

Query: 507 XXXXLCGSVTFMIGLLLMPWVLGLVILFYFVGVVSTLSGLGRALLC----PPASSPKEIP 340
               LCGSVTF IG LLMPWVLGLV++FY  G+VST+S LGR+LLC    PP+S  KEIP
Sbjct: 65  LTLMLCGSVTFFIGFLLMPWVLGLVMVFYVAGIVSTISMLGRSLLCYATAPPSSPRKEIP 124

Query: 339 AW 334
           AW
Sbjct: 125 AW 126


>ref|XP_002270801.2| PREDICTED: uncharacterized protein LOC100243721 [Vitis vinifera]
          Length = 127

 Score =  107 bits (266), Expect = 5e-21
 Identities = 62/125 (49%), Positives = 76/125 (60%), Gaps = 11/125 (8%)
 Frame = -2

Query: 675 QNEQQTNKAFNELCTLVLNILGSPPLNNNTIPSSSH--------RTLSKQVSAAEFASXX 520
           + + Q ++ F EL  LVLN+L SPP   +  P S H        R  + Q+S A FAS  
Sbjct: 3   RQQDQQSRVFCELSALVLNLLRSPP---SPAPFSEHSPEVYTSRRPTTTQISPAGFASLL 59

Query: 519 XXXXXXXXLCGSVTFMIGLLLMPWVLGLVILFYFVGVVSTLSGLGRALLC---PPASSPK 349
                   LCGSVTF IG +LMPWVLGLV++FYFVG+VS LS LGRA++C    PA   K
Sbjct: 60  LGISLALMLCGSVTFFIGFILMPWVLGLVMVFYFVGIVSNLSVLGRAIICQATAPAKPRK 119

Query: 348 EIPAW 334
           EIPAW
Sbjct: 120 EIPAW 124


>gb|ACH87180.1| unknown protein [Camellia sinensis]
          Length = 129

 Score =  107 bits (266), Expect = 5e-21
 Identities = 59/124 (47%), Positives = 77/124 (62%), Gaps = 10/124 (8%)
 Frame = -2

Query: 675 QNEQQTNKAFNELCTLVLNILGSPPL-------NNNTIPSSSHRTLSKQVSAAEFASXXX 517
           + + Q ++ F EL  L+LN+L SPP        +   +PSS  R  +  +S A FAS   
Sbjct: 3   RRQDQQSRVFCELSALILNLLRSPPTPIQFSDPSPAAVPSSRRRPETPPISPAGFASLLL 62

Query: 516 XXXXXXXLCGSVTFMIGLLLMPWVLGLVILFYFVGVVSTLSGLGRALLC---PPASSPKE 346
                  LCGSVTF IG +LMPWVLGLV++FY VG+VS+LS +GRA+LC    PAS  KE
Sbjct: 63  GISLALMLCGSVTFFIGFMLMPWVLGLVMVFYVVGIVSSLSMIGRAILCHTTSPASPRKE 122

Query: 345 IPAW 334
           +PAW
Sbjct: 123 VPAW 126


>ref|XP_003553165.1| PREDICTED: uncharacterized protein LOC100799356 [Glycine max]
          Length = 126

 Score =  104 bits (259), Expect = 3e-20
 Identities = 55/117 (47%), Positives = 76/117 (64%), Gaps = 3/117 (2%)
 Frame = -2

Query: 675 QNEQQTNKAFNELCTLVLNILGSPPLNNNTIPSSSHRTLSKQVSAAEFASXXXXXXXXXX 496
           +++ + ++A  +L +LVLN+L SP   ++ +P +S R    Q+S A FAS          
Sbjct: 7   RHQDEQSRALYDLSSLVLNLLRSPLTFSDEVPPASRRPGQAQISPAGFASLLLGISLALM 66

Query: 495 LCGSVTFMIGLLLMPWVLGLVILFYFVGVVSTLSGLGRALLC---PPASSPKEIPAW 334
           LCGSVTF IG +LMPWVLGLV+LFY  G++STLS  GR++LC    P S  K+IPAW
Sbjct: 67  LCGSVTFFIGFVLMPWVLGLVMLFYVAGILSTLSVFGRSILCYATSPPSPRKDIPAW 123


>ref|XP_002514895.1| conserved hypothetical protein [Ricinus communis]
           gi|223545946|gb|EEF47449.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 134

 Score = 99.8 bits (247), Expect = 8e-19
 Identities = 63/133 (47%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
 Frame = -2

Query: 690 MMRVWQNEQQTNKAFNELCTLVLNILGSPPLN--------NNTIPSSSHRTLS---KQVS 544
           MMR  ++ Q  ++ F EL  LVLN+L SPP +        ++  PS S R       Q+S
Sbjct: 1   MMRSQEDHQ--SRVFYELSALVLNLLRSPPSSPSSSSAHFSDQSPSESQRRRRPSLSQIS 58

Query: 543 AAEFASXXXXXXXXXXLCGSVTFMIGLLLMPWVLGLVILFYFVGVVSTLSGLGRALLC-- 370
            A FAS          LCGSVTF IG +LMPWVLGLV++FY  GVVST+S LGR+ LC  
Sbjct: 59  PAGFASLMLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGVVSTISMLGRSFLCHA 118

Query: 369 -PPASSPKEIPAW 334
             P S  KEIP+W
Sbjct: 119 MTPPSPRKEIPSW 131


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