BLASTX nr result

ID: Coptis23_contig00001701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001701
         (1205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15549.3| unnamed protein product [Vitis vinifera]              393   e-107
ref|XP_003634199.1| PREDICTED: uncharacterized GPI-anchored prot...   393   e-107
ref|XP_002322090.1| predicted protein [Populus trichocarpa] gi|2...   380   e-103
gb|ABK95654.1| unknown [Populus trichocarpa]                          379   e-103
ref|XP_002533130.1| conserved hypothetical protein [Ricinus comm...   377   e-102

>emb|CBI15549.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  393 bits (1010), Expect = e-107
 Identities = 200/319 (62%), Positives = 242/319 (75%), Gaps = 4/319 (1%)
 Frame = +1

Query: 148  LLFLHIPYYLFALPTLPEPDPASIQPFLPTPSPPDTISAFPEQSNLATCPLDLPDELFHG 327
            LL L   + L     LPEPDP  I PF P PSPP+TI AFPEQS++A CPL+LPDELFHG
Sbjct: 5    LLLLVFCFLLPIFQALPEPDPVKIHPFHPNPSPPETIPAFPEQSDVAGCPLNLPDELFHG 64

Query: 328  IGHACS-GKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGK---MAVTPYDLPILPEDS 495
            I  ACS GK  +G+L RS+CCPVLAAWLYSAY+GTALGRA +      TPYDLP+LP+DS
Sbjct: 65   IKTACSAGKGASGELRRSRCCPVLAAWLYSAYSGTALGRAKRGLAPEATPYDLPLLPDDS 124

Query: 496  ESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLSCPEAFTVSKEGKLVGDKSVR 675
            E+CV++L K+LK RG+EL +PNETCDVVYC+C IRLHPLSCPEAF+VS +GKLVGD+SV+
Sbjct: 125  ETCVNDLEKSLKSRGVELVKPNETCDVVYCFCGIRLHPLSCPEAFSVSSKGKLVGDESVK 184

Query: 676  MLENDCLNNNKSHLSLARCSKCLNRLYQLKEENSMDSTRKSDRKSKMHSRDCELMGLTWL 855
             LE DCL+ N     L  CSKCLN LY L ++ + +S++   R  KMH+RDCELMGLTWL
Sbjct: 185  KLERDCLSTN-GFPGLGGCSKCLNTLYLLGKDKTGNSSKLEARSRKMHNRDCELMGLTWL 243

Query: 856  LSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDGLPLAVDSAELDDKSSSNTRLLTT 1035
            L+KNRTAYIHTV+AVLRA+M+S DGS P SC+L SDG+PLAVDSAE+   SSS     T+
Sbjct: 244  LAKNRTAYIHTVSAVLRAIMMSTDGSDPLSCTLNSDGMPLAVDSAEISSHSSS-----TS 298

Query: 1036 SGALVHVCAIIIFVLSLRF 1092
                +H+C     +LSL F
Sbjct: 299  LHFSIHLC-----ILSLSF 312


>ref|XP_003634199.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Vitis
            vinifera]
          Length = 327

 Score =  393 bits (1010), Expect = e-107
 Identities = 200/319 (62%), Positives = 242/319 (75%), Gaps = 4/319 (1%)
 Frame = +1

Query: 148  LLFLHIPYYLFALPTLPEPDPASIQPFLPTPSPPDTISAFPEQSNLATCPLDLPDELFHG 327
            LL L   + L     LPEPDP  I PF P PSPP+TI AFPEQS++A CPL+LPDELFHG
Sbjct: 5    LLLLVFCFLLPIFQALPEPDPVKIHPFHPNPSPPETIPAFPEQSDVAGCPLNLPDELFHG 64

Query: 328  IGHACS-GKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGK---MAVTPYDLPILPEDS 495
            I  ACS GK  +G+L RS+CCPVLAAWLYSAY+GTALGRA +      TPYDLP+LP+DS
Sbjct: 65   IKTACSAGKGASGELRRSRCCPVLAAWLYSAYSGTALGRAKRGLAPEATPYDLPLLPDDS 124

Query: 496  ESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLSCPEAFTVSKEGKLVGDKSVR 675
            E+CV++L K+LK RG+EL +PNETCDVVYC+C IRLHPLSCPEAF+VS +GKLVGD+SV+
Sbjct: 125  ETCVNDLEKSLKSRGVELVKPNETCDVVYCFCGIRLHPLSCPEAFSVSSKGKLVGDESVK 184

Query: 676  MLENDCLNNNKSHLSLARCSKCLNRLYQLKEENSMDSTRKSDRKSKMHSRDCELMGLTWL 855
             LE DCL+ N     L  CSKCLN LY L ++ + +S++   R  KMH+RDCELMGLTWL
Sbjct: 185  KLERDCLSTN-GFPGLGGCSKCLNTLYLLGKDKTGNSSKLEARSRKMHNRDCELMGLTWL 243

Query: 856  LSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDGLPLAVDSAELDDKSSSNTRLLTT 1035
            L+KNRTAYIHTV+AVLRA+M+S DGS P SC+L SDG+PLAVDSAE+   SSS     T+
Sbjct: 244  LAKNRTAYIHTVSAVLRAIMMSTDGSDPLSCTLNSDGMPLAVDSAEISSHSSS-----TS 298

Query: 1036 SGALVHVCAIIIFVLSLRF 1092
                +H+C     +LSL F
Sbjct: 299  LHFSIHLC-----ILSLSF 312


>ref|XP_002322090.1| predicted protein [Populus trichocarpa] gi|222869086|gb|EEF06217.1|
            predicted protein [Populus trichocarpa]
          Length = 334

 Score =  380 bits (977), Expect = e-103
 Identities = 193/325 (59%), Positives = 237/325 (72%), Gaps = 11/325 (3%)
 Frame = +1

Query: 145  FLLFLHIPYYLFALPTLPEPDPASIQPFLPTPSPPDTISAFPEQSNLATCPLDLPDELFH 324
            FLL L +  +   LP LP PD A+IQPF P PSPP  I AFPEQSNLA CPLDLP+ELFH
Sbjct: 8    FLLLLAL--FPLLLPGLPNPDTATIQPFKPNPSPPAIIPAFPEQSNLAGCPLDLPNELFH 65

Query: 325  GIGHAC-SGKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGKMAVTP-------YDLPI 480
            GI  AC SG +  G L R++CCPVLAAWLYSAY+ TAL RA K+           YD+P+
Sbjct: 66   GINSACGSGSSATGHLHRTRCCPVLAAWLYSAYSATALSRANKVIPATDTGRSPSYDMPL 125

Query: 481  LPEDSESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLSCPEAFTVSKEGKLVG 660
            LP+DSE+CVD L K LK +GIEL +PNETCDVVYCYC IRLHPLSCPEAF++++ GKLVG
Sbjct: 126  LPDDSETCVDGLSKGLKEKGIELFKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGKLVG 185

Query: 661  DKSVRMLENDCL---NNNKSHLSLARCSKCLNRLYQLKEENSMDSTRKSDRKSKMHSRDC 831
            DK V  LE +CL   NN      L  CSKCLN LY L  + +++S++  DR +KMH++DC
Sbjct: 186  DKRVEKLERNCLSDSNNVNGFPGLGGCSKCLNSLYLLNNKKALNSSKSEDRTTKMHNKDC 245

Query: 832  ELMGLTWLLSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDGLPLAVDSAELDDKSS 1011
            +LMGLTWLL+KNRTAYIHTVTAVLRA+M+S DGS P+SC+L+SDG+PL VDS+E+     
Sbjct: 246  QLMGLTWLLAKNRTAYIHTVTAVLRAMMMSIDGSDPRSCTLSSDGMPLPVDSSEI----- 300

Query: 1012 SNTRLLTTSGALVHVCAIIIFVLSL 1086
            SN     +  A ++V   +I +LSL
Sbjct: 301  SNNSFSISHQAPIYVTIAVICLLSL 325


>gb|ABK95654.1| unknown [Populus trichocarpa]
          Length = 334

 Score =  379 bits (974), Expect = e-103
 Identities = 192/325 (59%), Positives = 237/325 (72%), Gaps = 11/325 (3%)
 Frame = +1

Query: 145  FLLFLHIPYYLFALPTLPEPDPASIQPFLPTPSPPDTISAFPEQSNLATCPLDLPDELFH 324
            FLL L +  +   LP LP PD A+IQPF P PSPP  I AFPEQSNLA CPLDLP+ELFH
Sbjct: 8    FLLLLAL--FPLLLPGLPNPDTATIQPFKPNPSPPAIIPAFPEQSNLAGCPLDLPNELFH 65

Query: 325  GIGHAC-SGKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGKMAVTP-------YDLPI 480
            GI  AC SG +  G L R++CCPVLAAWLYSAY+ TAL RA ++           YD+P+
Sbjct: 66   GINSACGSGSSATGHLHRTRCCPVLAAWLYSAYSATALSRANRVIPATDTGRSPSYDMPL 125

Query: 481  LPEDSESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLSCPEAFTVSKEGKLVG 660
            LP+DSE+CVD L K LK +GIEL +PNETCDVVYCYC IRLHPLSCPEAF++++ GKLVG
Sbjct: 126  LPDDSETCVDGLSKGLKEKGIELFKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGKLVG 185

Query: 661  DKSVRMLENDCL---NNNKSHLSLARCSKCLNRLYQLKEENSMDSTRKSDRKSKMHSRDC 831
            DK V  LE +CL   NN      L  CSKCLN LY L  + +++S++  DR +KMH++DC
Sbjct: 186  DKRVEKLERNCLSDSNNVNGFPGLGGCSKCLNSLYLLNNKKALNSSKSEDRTTKMHNKDC 245

Query: 832  ELMGLTWLLSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDGLPLAVDSAELDDKSS 1011
            +LMGLTWLL+KNRTAYIHTVTAVLRA+M+S DGS P+SC+L+SDG+PL VDS+E+     
Sbjct: 246  QLMGLTWLLAKNRTAYIHTVTAVLRAMMMSIDGSDPRSCTLSSDGMPLPVDSSEI----- 300

Query: 1012 SNTRLLTTSGALVHVCAIIIFVLSL 1086
            SN     +  A ++V   +I +LSL
Sbjct: 301  SNNSFSISHQAPIYVTIAVICLLSL 325


>ref|XP_002533130.1| conserved hypothetical protein [Ricinus communis]
            gi|223527074|gb|EEF29257.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 330

 Score =  377 bits (968), Expect = e-102
 Identities = 186/325 (57%), Positives = 242/325 (74%), Gaps = 7/325 (2%)
 Frame = +1

Query: 139  LFFLLFLHIPYYLFALPTLPEPDPASIQPFLPTPSPPDTISAFPEQSNLATCPLDLPDEL 318
            LF  LF  +P+  F +  +  PDP +IQ FLP PSPP TI AFPEQSN+A CPLD+PDEL
Sbjct: 7    LFLFLFTILPFP-FLISGVSNPDPVTIQSFLPNPSPPATIPAFPEQSNIAGCPLDIPDEL 65

Query: 319  FHGIGHACSGKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGKMAVTP----YDLPILP 486
            FH +  AC   N   QL +S+CCPVLAAWLY+AY+ TALGRA ++A       YD+P+LP
Sbjct: 66   FHSVKSACG--NGQQQLHKSRCCPVLAAWLYAAYSATALGRAARVAPATVAGAYDMPLLP 123

Query: 487  EDSESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLSCPEAFTVSKEGKLVGDK 666
            +DSE+CVD+LGKAL  +G+EL +PNETCD+VYCYC IRLHPLSC EAF+ ++EGKLVGDK
Sbjct: 124  DDSETCVDDLGKALSQKGVELVRPNETCDLVYCYCGIRLHPLSCSEAFSTNQEGKLVGDK 183

Query: 667  SVRMLENDCLNN--NKSHL-SLARCSKCLNRLYQLKEENSMDSTRKSDRKSKMHSRDCEL 837
             V  LE DCL++  N +H   L  CSKCLN LY L  + +++S++  DR +KMH++DC+L
Sbjct: 184  RVHKLERDCLSSSTNVNHFPGLGGCSKCLNALYLLNNKKTLNSSKSDDRTTKMHNKDCQL 243

Query: 838  MGLTWLLSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDGLPLAVDSAELDDKSSSN 1017
            MGLTWLL+ NRTAYIHTV+AVLRA+M++ D S+PQSC+L SDG+PLAVDS+E+     SN
Sbjct: 244  MGLTWLLATNRTAYIHTVSAVLRAMMMNVDSSNPQSCTLGSDGMPLAVDSSEI-----SN 298

Query: 1018 TRLLTTSGALVHVCAIIIFVLSLRF 1092
              L  T  A +++  ++I +L + F
Sbjct: 299  NSLSVTHQAPIYLSVVLICLLHILF 323


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