BLASTX nr result

ID: Coptis23_contig00001689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001689
         (1479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   516   e-144
ref|XP_002520726.1| potassium channel regulatory factor, putativ...   513   e-143
ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   504   e-140
ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   504   e-140
ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like ...   500   e-139

>ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like [Vitis vinifera]
          Length = 412

 Score =  516 bits (1328), Expect = e-144
 Identities = 271/395 (68%), Positives = 305/395 (77%), Gaps = 2/395 (0%)
 Frame = +1

Query: 139  GGKKYFNRSELEKKRIQKNREEEQRELQSKS-KQTHFTKXXXXXXXXXXXXXXXXXXXXX 315
            GGK++F RSE+E++ IQK RE+E+REL++K+ +  + T                      
Sbjct: 20   GGKRFFKRSEIEQRNIQKLREQEKRELEAKALRHNNGTASSSTAAAASATSTPSSDAKPD 79

Query: 316  XXXXXXXKTPEEQKIDDMVLPKQEVIRRLRFLKQPVTLFGEDDDSRLNRLKFTLKAGVFE 495
                      +EQKID+MVLPKQEVIRRLRFLKQP+TLFGEDD +RL+RLK+ LKAG+FE
Sbjct: 80   LTSSSSKAITDEQKIDEMVLPKQEVIRRLRFLKQPITLFGEDDTARLDRLKYVLKAGIFE 139

Query: 496  VDSDMTEGQTNDFLRDIAELKKRQKTG-LSDRKRKKXXXXXXXXXXXXXXXXXXXXXXXX 672
            VDSDMTEGQTNDFLRDIAEL+KRQKTG LSDRKRK                         
Sbjct: 140  VDSDMTEGQTNDFLRDIAELRKRQKTGILSDRKRKSPEDGVEDGEGGGGDDDLSGDGGSS 199

Query: 673  XXXMDIGEDLKRMKANFEELCDEDKILVFFKKLLIEWSLELYDKSDLEKRTAKGKQMFAT 852
               +D  +DLKRMKANFEELCDEDKILVFFK+LLIEW+ EL +K + EKRTAKGK M AT
Sbjct: 200  G--VDADKDLKRMKANFEELCDEDKILVFFKRLLIEWNQELNEKQEGEKRTAKGKSMVAT 257

Query: 853  FKQCARYLHPLFKFCRKKILPDDIRQALLVVVNCCMKRDYLAAMDQYIKMAIGNAPWPIG 1032
            FKQCARYL+PLFKFCRKK+L DDIRQALLVVV CCMKRDYLAAMDQYIK+AIGNAPWPIG
Sbjct: 258  FKQCARYLNPLFKFCRKKVLQDDIRQALLVVVECCMKRDYLAAMDQYIKLAIGNAPWPIG 317

Query: 1033 VTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRKYPAMPSKAVEFNSL 1212
            VTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS+KRLMTFCQR+YP MPSKAVEFNSL
Sbjct: 318  VTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSL 377

Query: 1213 ANGSDLQSLLAEERVVTGNQGSEDLLRLMSA*KRT 1317
            ANGSDLQSLLAEER   GNQ SE+ L LM+  K +
Sbjct: 378  ANGSDLQSLLAEERFSGGNQASEERLHLMAPPKES 412


>ref|XP_002520726.1| potassium channel regulatory factor, putative [Ricinus communis]
            gi|223540111|gb|EEF41688.1| potassium channel regulatory
            factor, putative [Ricinus communis]
          Length = 417

 Score =  513 bits (1322), Expect = e-143
 Identities = 267/393 (67%), Positives = 303/393 (77%), Gaps = 5/393 (1%)
 Frame = +1

Query: 139  GGKKYFNRSELEKKRIQKNREEEQRELQSKSKQTHFTKXXXXXXXXXXXXXXXXXXXXXX 318
            GGK+ F RSE+++K IQK RE+E++EL++K+K+   +                       
Sbjct: 20   GGKRVFKRSEIQQKEIQKLREQEKQELEAKAKRQSSSTETATTTTSTSSTANTPSTTTTT 79

Query: 319  XXXXXXKTPE----EQKIDDMVLPKQEVIRRLRFLKQPVTLFGEDDDSRLNRLKFTLKAG 486
                   T +    EQ ID+++LPKQEVIRRLRFLKQP+TLFGEDDD+RL+RLK  LKAG
Sbjct: 80   TTSAAATTSKSLTNEQNIDNLILPKQEVIRRLRFLKQPITLFGEDDDARLDRLKHVLKAG 139

Query: 487  VFEVDSDMTEGQTNDFLRDIAELKKRQKTGL-SDRKRKKXXXXXXXXXXXXXXXXXXXXX 663
            +FEVDSDMTEGQTNDFLRDIAEL+KRQK+G+ S+RKRK                      
Sbjct: 140  IFEVDSDMTEGQTNDFLRDIAELRKRQKSGIVSERKRKDREEGAGEDGEGGEGEREMSGD 199

Query: 664  XXXXXXMDIGEDLKRMKANFEELCDEDKILVFFKKLLIEWSLELYDKSDLEKRTAKGKQM 843
                  +D  +DLKRMKANFEELCDEDKILVFFK+LLIEW  EL + ++ EKRTAKGK M
Sbjct: 200  GDSSGGVDADKDLKRMKANFEELCDEDKILVFFKRLLIEWKQELDEMAEAEKRTAKGKSM 259

Query: 844  FATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVNCCMKRDYLAAMDQYIKMAIGNAPW 1023
             ATFKQCARYLHPLFKFCRKK+LPDDIRQALLVVV CCMKRDYLAAMD YIK+AIGNAPW
Sbjct: 260  VATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDHYIKLAIGNAPW 319

Query: 1024 PIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRKYPAMPSKAVEF 1203
            PIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQR+YP MPSKAVEF
Sbjct: 320  PIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEF 379

Query: 1204 NSLANGSDLQSLLAEERVVTGNQGSEDLLRLMS 1302
            NSLANGSDLQSLLAEERV +GNQ SE  L+LM+
Sbjct: 380  NSLANGSDLQSLLAEERVHSGNQPSEGRLQLMA 412


>ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 411

 Score =  504 bits (1299), Expect = e-140
 Identities = 261/389 (67%), Positives = 296/389 (76%)
 Frame = +1

Query: 139  GGKKYFNRSELEKKRIQKNREEEQRELQSKSKQTHFTKXXXXXXXXXXXXXXXXXXXXXX 318
            GGKK+F RSE+++K IQK R++E+REL++KS +   T                       
Sbjct: 20   GGKKFFKRSEIQQKEIQKLRQQEKRELEAKSLKRLATSSDTAATAPSSSSTASSSASSTI 79

Query: 319  XXXXXXKTPEEQKIDDMVLPKQEVIRRLRFLKQPVTLFGEDDDSRLNRLKFTLKAGVFEV 498
                   T +EQ ID++VLPK EVIRRLRFLKQPVTLFGEDDD+RL+RLK+ LKAGVFEV
Sbjct: 80   ASASASLT-DEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGVFEV 138

Query: 499  DSDMTEGQTNDFLRDIAELKKRQKTGLSDRKRKKXXXXXXXXXXXXXXXXXXXXXXXXXX 678
            DSDMTEGQTNDFLRDIAEL+KRQKTG+   ++++                          
Sbjct: 139  DSDMTEGQTNDFLRDIAELRKRQKTGILGERKRQKADDGAAQDREGGAGDDDLSDCGSSE 198

Query: 679  XMDIGEDLKRMKANFEELCDEDKILVFFKKLLIEWSLELYDKSDLEKRTAKGKQMFATFK 858
              +  +DLKRMKANFEELCDEDKILVFFKKLL EW  EL +  + EKRTAKGK M ATFK
Sbjct: 199  GAEADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELREMPEAEKRTAKGKSMVATFK 258

Query: 859  QCARYLHPLFKFCRKKILPDDIRQALLVVVNCCMKRDYLAAMDQYIKMAIGNAPWPIGVT 1038
            QCARYL+PLFKFCRKK+LPDDIRQALL++V CCMKRDYLAAMD YIK+AIGNAPWPIGVT
Sbjct: 259  QCARYLNPLFKFCRKKVLPDDIRQALLLMVECCMKRDYLAAMDHYIKLAIGNAPWPIGVT 318

Query: 1039 MVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRKYPAMPSKAVEFNSLAN 1218
            MVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQR+YP +PSKAVEFNSLAN
Sbjct: 319  MVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLAN 378

Query: 1219 GSDLQSLLAEERVVTGNQGSEDLLRLMSA 1305
            GSDL SLLAEER   GNQ SE+ LR+M A
Sbjct: 379  GSDLHSLLAEERFSGGNQASEERLRIMPA 407


>ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max]
          Length = 413

 Score =  504 bits (1299), Expect = e-140
 Identities = 261/390 (66%), Positives = 295/390 (75%), Gaps = 1/390 (0%)
 Frame = +1

Query: 139  GGKKYFNRSELEKKRIQKNREEEQRELQSKSKQTHFTKXXXXXXXXXXXXXXXXXXXXXX 318
            GGKK+F RSE+++K IQK RE+E+REL++KS++   T                       
Sbjct: 20   GGKKFFKRSEIQQKEIQKLREQEKRELEAKSQKRLATSSDNAATAPSSSSTASASASSTI 79

Query: 319  XXXXXXKTPEEQKIDDMVLPKQEVIRRLRFLKQPVTLFGEDDDSRLNRLKFTLKAGVFEV 498
                      EQ ID++VLPK EVIRRLRFLKQPVTLFGEDDD+RL+RLK+ LKAGVFEV
Sbjct: 80   ASSSAASLTNEQNIDNLVLPKPEVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGVFEV 139

Query: 499  DSDMTEGQTNDFLRDIAELKKRQKTGLSDRKRKKXXXXXXXXXXXXXXXXXXXXXXXXXX 678
            DSDMTEGQTNDFLRDIAEL+KRQKTG+   ++++                          
Sbjct: 140  DSDMTEGQTNDFLRDIAELRKRQKTGILGERKRQKADDGAAEDREGGAGDDDLSDCGGSD 199

Query: 679  XMDIGEDLKRMKANFEELCDEDKILVFFKKLLIEWSLELYDKSDLEKRTAKGKQMFATFK 858
              D  +DLKRMKANFEELCDEDKILVFFKKLL EW  EL +  + EKRTAKGK M ATFK
Sbjct: 200  GADADKDLKRMKANFEELCDEDKILVFFKKLLNEWKQELREMPEAEKRTAKGKSMVATFK 259

Query: 859  QCARYLHPLFKFCRKKILPDDIRQALLVVVNCCMKRDYLAAMDQYIKMAIGNAPWPIGVT 1038
            QCARYL+PLFKFCRKK+LPDDIRQALL++V CCM+RDYLAAMD YIK+AIGNAPWPIGVT
Sbjct: 260  QCARYLNPLFKFCRKKVLPDDIRQALLLMVECCMRRDYLAAMDHYIKLAIGNAPWPIGVT 319

Query: 1039 MVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRKYPAMPSKAVEFNSLAN 1218
            MVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQR+YP +PSKAVEFNSLAN
Sbjct: 320  MVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLAN 379

Query: 1219 GSDLQSLLAEERVVTGNQ-GSEDLLRLMSA 1305
            GSDL SLLAEER   GNQ  SE+ LR+M A
Sbjct: 380  GSDLHSLLAEERFSGGNQAASEERLRIMPA 409


>ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like [Cucumis sativus]
            gi|449491488|ref|XP_004158914.1| PREDICTED:
            pre-mRNA-splicing factor 18-like [Cucumis sativus]
          Length = 420

 Score =  500 bits (1288), Expect = e-139
 Identities = 265/399 (66%), Positives = 303/399 (75%), Gaps = 10/399 (2%)
 Frame = +1

Query: 139  GGKKYFNRSELEKKRIQKNREEEQRELQSKSKQTHFTKXXXXXXXXXXXXXXXXXXXXXX 318
            GGK+ F RSE+E+++IQ+ RE+E+REL++K+ +   T                       
Sbjct: 20   GGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTT 79

Query: 319  XXXXXXKTP--------EEQKIDDMVLPKQEVIRRLRFLKQPVTLFGEDDDSRLNRLKFT 474
                   +         +EQ ID++VLP+QEVIRRLRFLKQP+TLFGEDDD+RL+RLKF 
Sbjct: 80   SSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFV 139

Query: 475  LKAGVFEVDSDMTEGQTNDFLRDIAELKKRQKTG-LSDRKRKKXXXXXXXXXXXXXXXXX 651
            LKAG+FEVDSD+TEGQTNDFLRDIAEL+KRQKTG LS+RKR+K                 
Sbjct: 140  LKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEE 199

Query: 652  XXXXXXXXXXMDIGEDLKRMKANFEELCDEDKILVFFKKLLIEWSLELYDKSDLEKRTAK 831
                       D  +DLKRMKANF+ELC+EDKILVFFK+LL EW  EL +  + EKRTAK
Sbjct: 200  SADGGSSGVETD--KDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAK 257

Query: 832  GKQMFATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVNCCMKRDYLAAMDQYIKMAIG 1011
            GK M ATFKQCARYLHPLFKFCRKK+LPDDIRQALLVVV CCMKRDYLAAMDQYIKMAIG
Sbjct: 258  GKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDQYIKMAIG 317

Query: 1012 NAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRKYPAMPSK 1191
            NAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS+KRLMTFCQR+YP MPSK
Sbjct: 318  NAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSK 377

Query: 1192 AVEFNSLANGSDLQSLLAEERVVTGNQ-GSEDLLRLMSA 1305
            AVEFNSLANGSDLQSLLAEERV  G + GS++ LR+M A
Sbjct: 378  AVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPA 416


Top