BLASTX nr result

ID: Coptis23_contig00001682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001682
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane prot...   385   e-104
ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane prot...   381   e-103
ref|XP_002312786.1| porin/voltage-dependent anion-selective chan...   380   e-103
gb|AAB38498.1| porin [Mesembryanthemum crystallinum]                  377   e-102
ref|XP_002520135.1| voltage-dependent anion-selective channel, p...   376   e-102

>ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
            isoform 1 [Vitis vinifera]
          Length = 276

 Score =  385 bits (988), Expect = e-104
 Identities = 187/249 (75%), Positives = 218/249 (87%)
 Frame = -2

Query: 1057 KATLTTVTASGLAITTSATVKGDLLLADLNAKLVNKNVTTDLKVDTNSRLTTTITVDEAA 878
            K T+TT T+SG+AIT+S T KG+L +AD+N +L NKN+TTD+KVDTNS L TTITVDE A
Sbjct: 28   KFTVTTYTSSGVAITSSGTKKGELFIADVNTQLKNKNITTDVKVDTNSNLFTTITVDEPA 87

Query: 877  PGLKTIVSFVAPDQKSGKVELQYQHDYAGISTSVGLTANPILNFSGVIGTNVLAVGTDIS 698
            PGLKTI SF+ PDQ+SGKVELQY H+YAGISTS+GLTANPI+NFSGV+G N L++GTD+S
Sbjct: 88   PGLKTIFSFIIPDQRSGKVELQYLHEYAGISTSIGLTANPIVNFSGVVGNNTLSLGTDLS 147

Query: 697  FDTAARNLTKCNTGLTFSNSDLIAALTLNNKGETLTASYYHVLSPLTSTAVGGELAHSFS 518
            FDTA  N TKCN GL FSN+DLIAALTLN+KG+TL ASYYH +SPLT+TAVG EL+H FS
Sbjct: 148  FDTATGNFTKCNAGLGFSNADLIAALTLNDKGDTLNASYYHTVSPLTNTAVGAELSHCFS 207

Query: 517  TNENTLTFGTQHALDPLTMVKARVDNYGKLSGIIQHEWRPKSLVTVSGEVDTRAIEKSAK 338
            TNENTLT GTQHALDPLT VKAR +N GK+S +IQHEWRPKSL T+SGEVD RA+EKSAK
Sbjct: 208  TNENTLTIGTQHALDPLTKVKARANNSGKVSALIQHEWRPKSLFTISGEVDARAVEKSAK 267

Query: 337  VGLALALKP 311
            +GLALALKP
Sbjct: 268  IGLALALKP 276


>ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane protein porin of 34 kDa-like
            [Cucumis sativus] gi|449523227|ref|XP_004168625.1|
            PREDICTED: mitochondrial outer membrane protein porin of
            34 kDa-like [Cucumis sativus]
          Length = 276

 Score =  381 bits (978), Expect = e-103
 Identities = 186/249 (74%), Positives = 220/249 (88%)
 Frame = -2

Query: 1057 KATLTTVTASGLAITTSATVKGDLLLADLNAKLVNKNVTTDLKVDTNSRLTTTITVDEAA 878
            K T+TT + +G+AIT+S T KGDL LAD+N +L NKN+TTD+KVDT+S L TTITVDE A
Sbjct: 28   KFTITTYSPTGVAITSSGTKKGDLFLADVNTQLKNKNITTDIKVDTSSNLVTTITVDEPA 87

Query: 877  PGLKTIVSFVAPDQKSGKVELQYQHDYAGISTSVGLTANPILNFSGVIGTNVLAVGTDIS 698
            PGLK I SF  PDQ+SGKVELQY HDYAGISTS+GLTANPI+NFSGV+G+N+LA+GTD+S
Sbjct: 88   PGLKAIFSFKVPDQRSGKVELQYLHDYAGISTSIGLTANPIVNFSGVVGSNLLALGTDLS 147

Query: 697  FDTAARNLTKCNTGLTFSNSDLIAALTLNNKGETLTASYYHVLSPLTSTAVGGELAHSFS 518
            FDT   N TK NTGL+F+N+DLIA+LTLN+KG+TL+ASYYH ++PLTSTAVG E+AHSFS
Sbjct: 148  FDTKTGNFTKVNTGLSFANADLIASLTLNDKGDTLSASYYHTVNPLTSTAVGAEVAHSFS 207

Query: 517  TNENTLTFGTQHALDPLTMVKARVDNYGKLSGIIQHEWRPKSLVTVSGEVDTRAIEKSAK 338
            +NENT+T GTQHALDPLT VKARV+N+GK S +IQHEWRPKS  TVSGEVDT+AIEKSAK
Sbjct: 208  SNENTITVGTQHALDPLTSVKARVNNFGKASALIQHEWRPKSFFTVSGEVDTKAIEKSAK 267

Query: 337  VGLALALKP 311
            VGLALALKP
Sbjct: 268  VGLALALKP 276


>ref|XP_002312786.1| porin/voltage-dependent anion-selective channel protein [Populus
            trichocarpa] gi|118481103|gb|ABK92505.1| unknown [Populus
            trichocarpa] gi|222852606|gb|EEE90153.1|
            porin/voltage-dependent anion-selective channel protein
            [Populus trichocarpa]
          Length = 276

 Score =  380 bits (977), Expect = e-103
 Identities = 183/249 (73%), Positives = 224/249 (89%)
 Frame = -2

Query: 1057 KATLTTVTASGLAITTSATVKGDLLLADLNAKLVNKNVTTDLKVDTNSRLTTTITVDEAA 878
            K T+TT T++G+AIT++   KG+L LAD++++L NKN+TTD+KVDTNS L TTIT+DE A
Sbjct: 28   KFTVTTYTSAGVAITSTGIKKGELFLADISSQLKNKNITTDVKVDTNSNLLTTITIDEPA 87

Query: 877  PGLKTIVSFVAPDQKSGKVELQYQHDYAGISTSVGLTANPILNFSGVIGTNVLAVGTDIS 698
            PGLKTI SF  PDQ+SGKVELQYQH+YAGISTS+GLTANPI+NFSGV+G+NV+A+GTD+S
Sbjct: 88   PGLKTIFSFKVPDQRSGKVELQYQHEYAGISTSLGLTANPIVNFSGVVGSNVVALGTDLS 147

Query: 697  FDTAARNLTKCNTGLTFSNSDLIAALTLNNKGETLTASYYHVLSPLTSTAVGGELAHSFS 518
            FDTA  N TKCN GL+++NSDLIA+LT+N+KG+TL+ASYYH +SPLTSTAVG EL HSFS
Sbjct: 148  FDTATGNFTKCNAGLSYTNSDLIASLTVNDKGDTLSASYYHTVSPLTSTAVGAELTHSFS 207

Query: 517  TNENTLTFGTQHALDPLTMVKARVDNYGKLSGIIQHEWRPKSLVTVSGEVDTRAIEKSAK 338
            +NEN LT GTQHALDPLT VKAR++NYGK+S +IQ+EWRPKSL T+SGEVDT+AIEKSAK
Sbjct: 208  SNENILTIGTQHALDPLTTVKARLNNYGKVSALIQNEWRPKSLFTISGEVDTKAIEKSAK 267

Query: 337  VGLALALKP 311
            VGLAL+LKP
Sbjct: 268  VGLALSLKP 276


>gb|AAB38498.1| porin [Mesembryanthemum crystallinum]
          Length = 276

 Score =  377 bits (967), Expect = e-102
 Identities = 183/249 (73%), Positives = 218/249 (87%)
 Frame = -2

Query: 1057 KATLTTVTASGLAITTSATVKGDLLLADLNAKLVNKNVTTDLKVDTNSRLTTTITVDEAA 878
            K ++TT + +G+AIT+S T KGDL LAD+N +L NKNVTTD+KVDTNS L TTITVDEAA
Sbjct: 28   KFSITTYSPTGVAITSSGTKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLLTTITVDEAA 87

Query: 877  PGLKTIVSFVAPDQKSGKVELQYQHDYAGISTSVGLTANPILNFSGVIGTNVLAVGTDIS 698
            PGLKTI+SF  PDQ+SGK+ELQY HDYAGI TSVGLTANPI+NFSGV+GTN+LA GTD+S
Sbjct: 88   PGLKTILSFRVPDQRSGKLELQYLHDYAGICTSVGLTANPIVNFSGVLGTNLLAFGTDVS 147

Query: 697  FDTAARNLTKCNTGLTFSNSDLIAALTLNNKGETLTASYYHVLSPLTSTAVGGELAHSFS 518
            FD+   N TKCN GL+F+N+DLIA+LTLN+KG+TL ASYYH +SPLTS+AVG E+AHSFS
Sbjct: 148  FDSKTGNFTKCNAGLSFANADLIASLTLNDKGDTLNASYYHTISPLTSSAVGAEVAHSFS 207

Query: 517  TNENTLTFGTQHALDPLTMVKARVDNYGKLSGIIQHEWRPKSLVTVSGEVDTRAIEKSAK 338
            TN+NT+T G QHA+DPLT +K RV+N+GK + +IQHEWRPKSLVT S EVDT+AIEKSAK
Sbjct: 208  TNQNTITLGAQHAIDPLTNLKGRVNNFGKATALIQHEWRPKSLVTFSAEVDTKAIEKSAK 267

Query: 337  VGLALALKP 311
            VGLALALKP
Sbjct: 268  VGLALALKP 276


>ref|XP_002520135.1| voltage-dependent anion-selective channel, putative [Ricinus
            communis] gi|223540627|gb|EEF42190.1| voltage-dependent
            anion-selective channel, putative [Ricinus communis]
          Length = 276

 Score =  376 bits (966), Expect = e-102
 Identities = 181/249 (72%), Positives = 223/249 (89%)
 Frame = -2

Query: 1057 KATLTTVTASGLAITTSATVKGDLLLADLNAKLVNKNVTTDLKVDTNSRLTTTITVDEAA 878
            K T+TT T++G+AIT++   KG++ L D+ ++L NKN+TTD+KVDT+S ++TTITVDE A
Sbjct: 28   KFTVTTYTSTGVAITSTGIKKGEIYLGDITSQLKNKNITTDIKVDTSSNVSTTITVDEPA 87

Query: 877  PGLKTIVSFVAPDQKSGKVELQYQHDYAGISTSVGLTANPILNFSGVIGTNVLAVGTDIS 698
            PGLKTI SF  PDQ+SGKVELQYQH++AGISTS+GLTANPI+NFSGVIG++ +A+GTD+S
Sbjct: 88   PGLKTIFSFKIPDQRSGKVELQYQHEHAGISTSIGLTANPIVNFSGVIGSSAVALGTDLS 147

Query: 697  FDTAARNLTKCNTGLTFSNSDLIAALTLNNKGETLTASYYHVLSPLTSTAVGGELAHSFS 518
            FDTA+ N TK N GL++SN+DLIA+LTLN+KG+TL ASYYH++SPLT+TAVG EL HSFS
Sbjct: 148  FDTASGNFTKLNAGLSYSNTDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFS 207

Query: 517  TNENTLTFGTQHALDPLTMVKARVDNYGKLSGIIQHEWRPKSLVTVSGEVDTRAIEKSAK 338
            +NENTLTFGTQHALDPLT VKARV++YGK S +IQHEWRPKSL T+SGEVDTRAIEKSAK
Sbjct: 208  SNENTLTFGTQHALDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIEKSAK 267

Query: 337  VGLALALKP 311
            +GLALALKP
Sbjct: 268  IGLALALKP 276


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