BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001676
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   233   3e-59
ref|XP_002266109.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   233   4e-59
dbj|BAA96366.1| cytoplasmic ribosomal protein S13 [Panax ginseng]     233   4e-59
ref|XP_002511695.1| 40S ribosomal protein S13, putative [Ricinus...   232   5e-59
ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum l...   231   2e-58

>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|147820740|emb|CAN69640.1| hypothetical protein
           VITISV_028568 [Vitis vinifera]
           gi|296089171|emb|CBI38874.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  233 bits (594), Expect = 3e-59
 Identities = 118/126 (93%), Positives = 122/126 (96%), Gaps = 2/126 (1%)
 Frame = +2

Query: 38  LKVQSQD--DNICKFAKKGLPPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIP 211
           LK+ SQD  +NICKFAKKG+ PSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIP
Sbjct: 26  LKISSQDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIP 85

Query: 212 EDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYESTT 391
           EDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYESTT
Sbjct: 86  EDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYESTT 145

Query: 392 ASTLVA 409
           ASTLVA
Sbjct: 146 ASTLVA 151


>ref|XP_002266109.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|296084140|emb|CBI24528.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  233 bits (593), Expect = 4e-59
 Identities = 118/128 (92%), Positives = 121/128 (94%), Gaps = 2/128 (1%)
 Frame = +2

Query: 32  TRLKVQSQD--DNICKFAKKGLPPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPE 205
           T LK+ SQD  DNICKFAKKGL PSQIGV+LRDSHGIAQVKSVTGSKILR+LK HGLAPE
Sbjct: 24  TWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRVLKGHGLAPE 83

Query: 206 IPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYES 385
           IPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRL RYYKRTKKLPPVWKYES
Sbjct: 84  IPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLGRYYKRTKKLPPVWKYES 143

Query: 386 TTASTLVA 409
           TTASTLVA
Sbjct: 144 TTASTLVA 151


>dbj|BAA96366.1| cytoplasmic ribosomal protein S13 [Panax ginseng]
          Length = 151

 Score =  233 bits (593), Expect = 4e-59
 Identities = 116/125 (92%), Positives = 120/125 (96%)
 Frame = +2

Query: 35  RLKVQSQDDNICKFAKKGLPPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPE 214
           ++  Q  DDNICKFAKKGL PSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPE
Sbjct: 27  KITPQDVDDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPE 86

Query: 215 DLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYESTTA 394
           DLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPPVWKYESTTA
Sbjct: 87  DLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTA 146

Query: 395 STLVA 409
           STLVA
Sbjct: 147 STLVA 151


>ref|XP_002511695.1| 40S ribosomal protein S13, putative [Ricinus communis]
           gi|223548875|gb|EEF50364.1| 40S ribosomal protein S13,
           putative [Ricinus communis]
          Length = 151

 Score =  232 bits (592), Expect = 5e-59
 Identities = 118/126 (93%), Positives = 122/126 (96%), Gaps = 2/126 (1%)
 Frame = +2

Query: 38  LKVQSQD--DNICKFAKKGLPPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIP 211
           LK+ SQD  +NICKFAKKGL PSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIP
Sbjct: 26  LKISSQDVDENICKFAKKGLRPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIP 85

Query: 212 EDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYESTT 391
           EDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPPVWKYESTT
Sbjct: 86  EDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTT 145

Query: 392 ASTLVA 409
           ASTLVA
Sbjct: 146 ASTLVA 151


>ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum lycopersicum]
           gi|68449762|gb|AAY97868.1| cytoplasmic ribosomal protein
           S13 [Solanum lycopersicum]
          Length = 151

 Score =  231 bits (588), Expect = 2e-58
 Identities = 117/126 (92%), Positives = 121/126 (96%), Gaps = 2/126 (1%)
 Frame = +2

Query: 38  LKVQSQD--DNICKFAKKGLPPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIP 211
           LK+ + D  DNICKFAKKGL PSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIP
Sbjct: 26  LKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIP 85

Query: 212 EDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYESTT 391
           EDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPPVWKYESTT
Sbjct: 86  EDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTT 145

Query: 392 ASTLVA 409
           ASTLVA
Sbjct: 146 ASTLVA 151