BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001666
         (2003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71575.1| hypothetical protein VITISV_037193 [Vitis vinifera]   671   0.0  
ref|XP_002266863.2| PREDICTED: putative ribosomal RNA methyltran...   669   0.0  
ref|XP_003552992.1| PREDICTED: putative ribosomal RNA methyltran...   652   0.0  
ref|XP_003530809.1| PREDICTED: putative ribosomal RNA methyltran...   651   0.0  
ref|XP_002522787.1| Proliferating-cell nucleolar antigen p120, p...   649   0.0  

>emb|CAN71575.1| hypothetical protein VITISV_037193 [Vitis vinifera]
          Length = 741

 Score =  671 bits (1730), Expect(2) = 0.0
 Identities = 344/459 (74%), Positives = 378/459 (82%)
 Frame = +2

Query: 35   KEIGAEALQPPDLSNMQRRIKEIVRILSNFKTLRQEGVTRKDYVEQLKRDLSSYYGYNEF 214
            +E+  EA QPPDL N+QRRIKEIVR+LSNF +LRQEG  RKDYVEQL+ DL SYYGYNEF
Sbjct: 154  EELQEEARQPPDLPNLQRRIKEIVRVLSNFNSLRQEGAQRKDYVEQLRVDLGSYYGYNEF 213

Query: 215  LIGVLVEMFPVVELLELIESYEKPRPICLRTNTLKSRRRDLAEVLINRGVNCDPLSKWSK 394
            LIGVLVEMFPV+EL+ELIE++EKPRPICLRTNTLK+RRRDLA+VL+NRGVN DPLSKWSK
Sbjct: 214  LIGVLVEMFPVIELMELIEAFEKPRPICLRTNTLKTRRRDLADVLLNRGVNLDPLSKWSK 273

Query: 395  VGLVVYDSQVPIGATPEYMAGYYMLQSASSFLPVMALAPQEKERVVDMAAAPGGKTTYIA 574
            VGLVVYDSQVPIGATPEYMAG+YMLQSASSFLPVMALAPQEKER+VDMAAAPGGKTTYIA
Sbjct: 274  VGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERIVDMAAAPGGKTTYIA 333

Query: 575  ALMKNSGIIYANEVKEPRLKSLTANLQRMGVTNTIVCNYDGKELPKVLGQNTVDRVLLDA 754
            ALMKNSG+I+ANE+KEPRLKSLTANL RMGVTNT+VCNYDGKELPKVLG NTVDRVLLDA
Sbjct: 334  ALMKNSGMIFANEMKEPRLKSLTANLHRMGVTNTVVCNYDGKELPKVLGHNTVDRVLLDA 393

Query: 755  PCSGTGVISKDESVKASKSFDDIQNSAFLQKQLILAAIDMVDANSKSGGYIVYSTCSIMI 934
            PCSGTGVISKDESVK SKS +DIQ  A LQKQLILAAIDMVDANSKSGGYIVYSTCSIMI
Sbjct: 394  PCSGTGVISKDESVKTSKSLEDIQKCAHLQKQLILAAIDMVDANSKSGGYIVYSTCSIMI 453

Query: 935  SENEAVIDYALKKRDVQLVPCGLDFGRPGFTRFREHRFHPSLEKTRRFYPHVHNMDGFFV 1114
             ENEAVIDYALKKR+V+LVPCGLDFGRPGFTRFREHRFH SLEKTRRFYPHVHNMDGFFV
Sbjct: 454  PENEAVIDYALKKRNVKLVPCGLDFGRPGFTRFREHRFHQSLEKTRRFYPHVHNMDGFFV 513

Query: 1115 AKLXXXXXXXXXXXXXEPAETVEHAPVPEGSRSNINQDGGMSQQSEAPSSPEKENDLIQA 1294
            AKL             EP+E  E AP    S S +N  G  +QQ       +KEN  ++ 
Sbjct: 514  AKLKKMSNSKPNPTPSEPSEVEEQAPEENDSDSELNM-GEKTQQHPGKRGTKKENGGLK- 571

Query: 1295 MKTMVKNGNSKPSETFEGTPPPNVRGKNRNEEGEFELSE 1411
                    N+ P    + +P    + K R      E+S+
Sbjct: 572  --------NAAPENGKKESPSTTTKRKKRKFPSREEISK 602



 Score = 28.5 bits (62), Expect(2) = 0.0
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = +3

Query: 3   EESDEFRLPTERKLEQ 50
           EESDEFRLPT+ +L++
Sbjct: 143 EESDEFRLPTKEELQE 158


>ref|XP_002266863.2| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like [Vitis
            vinifera]
          Length = 633

 Score =  669 bits (1726), Expect(2) = 0.0
 Identities = 347/464 (74%), Positives = 379/464 (81%), Gaps = 5/464 (1%)
 Frame = +2

Query: 35   KEIGAEALQPPDLSNMQRRIKEIVRILSNFKTLRQEGVTRKDYVEQLKRDLSSYYGYNEF 214
            +E+  EA QPPDL N+QRRIKEIVR+LSNF +LRQEG  RKDYVEQL+ DL SYYGYNEF
Sbjct: 152  EELQEEARQPPDLPNLQRRIKEIVRVLSNFNSLRQEGAQRKDYVEQLRVDLGSYYGYNEF 211

Query: 215  LIGVLVEMFPVVELLELIESYEKPRPICLRTNTLKSRRRDLAEVLINRGVNCDPLSKWSK 394
            LIGVLVEMFPVVEL+ELIE++EKPRPICLRTNTLK+RRRDLA+VL+NRGVN DPLSKWSK
Sbjct: 212  LIGVLVEMFPVVELMELIEAFEKPRPICLRTNTLKTRRRDLADVLLNRGVNLDPLSKWSK 271

Query: 395  VGLVVYDSQVPIGATPEYMAGYYMLQSASSFLPVMALAPQEKERVVDMAAAPGGKTTYIA 574
            VGLVVYDSQVPIGATPEYMAG+YMLQSASSFLPVMALAPQEKER+VDMAAAPGGKTTYIA
Sbjct: 272  VGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERIVDMAAAPGGKTTYIA 331

Query: 575  ALMKNSGIIYANEVKEPRLKSLTANLQRMGVTNTIVCNYDGKELPKVLGQNTVDRVLLDA 754
            ALMKN G+I+ANE+KEPRLKSLTANL RMGVTNT+VCNYDGKELPKVLG NTVDRVLLDA
Sbjct: 332  ALMKNGGMIFANEMKEPRLKSLTANLHRMGVTNTVVCNYDGKELPKVLGHNTVDRVLLDA 391

Query: 755  PCSGTGVISKDESVKASKSFDDIQNSAFLQKQLILAAIDMVDANSKSGGYIVYSTCSIMI 934
            PCSGTGVISKDESVK SKS +DIQ  A LQKQLILAAIDMVDANSKSGGYIVYSTCSIMI
Sbjct: 392  PCSGTGVISKDESVKTSKSLEDIQKCAHLQKQLILAAIDMVDANSKSGGYIVYSTCSIMI 451

Query: 935  SENEAVIDYALKKRDVQLVPCGLDFGRPGFTRFREHRFHPSLEKTRRFYPHVHNMDGFFV 1114
             ENEAVIDYALKKR+V+LVPCGLDFGRPGFTRFREHRFH SLEKTRRFYPHVHNMDGFFV
Sbjct: 452  PENEAVIDYALKKRNVKLVPCGLDFGRPGFTRFREHRFHQSLEKTRRFYPHVHNMDGFFV 511

Query: 1115 AKLXXXXXXXXXXXXXEPAETVEHAPVPEGSRSNINQDGGMSQQSEAPSSPEKENDLIQA 1294
            AKL             EP+E  E AP    S S +N  G  +QQ       +KE      
Sbjct: 512  AKLKKMSNSKPNPTPSEPSEVEEQAPEENDSDSELNM-GEKTQQHPGKRGTKKEKTQQHP 570

Query: 1295 MK--TMVKNG---NSKPSETFEGTPPPNVRGKNRNEEGEFELSE 1411
             K  T  +NG   N+ P    + +P    + K R      E+S+
Sbjct: 571  GKRGTKKENGGLKNAAPENGKKESPSTTTKRKKRKFPSREEISK 614



 Score = 28.5 bits (62), Expect(2) = 0.0
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = +3

Query: 3   EESDEFRLPTERKLEQ 50
           EESDEFRLPT+ +L++
Sbjct: 141 EESDEFRLPTKEELQE 156


>ref|XP_003552992.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
            [Glycine max]
          Length = 610

 Score =  652 bits (1682), Expect(2) = 0.0
 Identities = 328/418 (78%), Positives = 364/418 (87%), Gaps = 4/418 (0%)
 Frame = +2

Query: 35   KEIGAEALQPPDLSNMQRRIKEIVRILSNFKTLRQEGVTRKDYVEQLKRDLSSYYGYNEF 214
            +E+  EAL+PPDLSN+QRRIKEIVR+LSNFK LRQ+G TRK+YVEQLK+DL +YYGYNEF
Sbjct: 133  EELEDEALRPPDLSNLQRRIKEIVRVLSNFKALRQDGSTRKEYVEQLKKDLCTYYGYNEF 192

Query: 215  LIGVLVEMFPVVELLELIESYEKPRPICLRTNTLKSRRRDLAEVLINRGVNCDPLSKWSK 394
            LIG LVEMFPVVEL+ELIE++EKPRP+CLRTNTLK+RRRDLA+VLINRGVN DPLSKWSK
Sbjct: 193  LIGALVEMFPVVELMELIEAFEKPRPMCLRTNTLKTRRRDLADVLINRGVNLDPLSKWSK 252

Query: 395  VGLVVYDSQVPIGATPEYMAGYYMLQSASSFLPVMALAPQEKERVVDMAAAPGGKTTYIA 574
            VGLVVYDSQVPIGATPEYMAG+YMLQSASSFLPVMALAPQEKERV+DMAAAPGGKTTYIA
Sbjct: 253  VGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIA 312

Query: 575  ALMKNSGIIYANEVKEPRLKSLTANLQRMGVTNTIVCNYDGKELPKVLGQNTVDRVLLDA 754
            ALMKN+GII+ANE+K PRLKSLT NL RMGV+NT+VCNYDGKELPKVLG N VDRVLLDA
Sbjct: 313  ALMKNTGIIFANEMKVPRLKSLTGNLHRMGVSNTVVCNYDGKELPKVLGVNVVDRVLLDA 372

Query: 755  PCSGTGVISKDESVKASKSFDDIQNSAFLQKQLILAAIDMVDANSKSGGYIVYSTCSIMI 934
            PCSGTGVISKDESVK SKS +DIQ  A LQK+LILAAIDMVDANSKSGGYIVYSTCSIM+
Sbjct: 373  PCSGTGVISKDESVKTSKSLEDIQKCAHLQKELILAAIDMVDANSKSGGYIVYSTCSIMV 432

Query: 935  SENEAVIDYALKKRDVQLVPCGLDFGRPGFTRFREHRFHPSLEKTRRFYPHVHNMDGFFV 1114
            +ENEAVIDYALKKRDV+LVPCGLDFGRPGFTRFRE RFHPSLEKTRRFYPHV NMDGFFV
Sbjct: 433  AENEAVIDYALKKRDVKLVPCGLDFGRPGFTRFREQRFHPSLEKTRRFYPHVQNMDGFFV 492

Query: 1115 AKLXXXXXXXXXXXXXEPAE----TVEHAPVPEGSRSNINQDGGMSQQSEAPSSPEKE 1276
            AKL             E AE    T       E S   I ++G +S +SE+ +  +++
Sbjct: 493  AKLKKMSSSKPGAKSSETAEKEEDTTTFVEEKEKSSYGIKENGNVSSESESKNGKKRK 550



 Score = 27.7 bits (60), Expect(2) = 0.0
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +3

Query: 3   EESDEFRLPTERKLE 47
           +ESDEFRLPT+ +LE
Sbjct: 122 QESDEFRLPTKEELE 136


>ref|XP_003530809.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
            [Glycine max]
          Length = 614

 Score =  651 bits (1680), Expect(2) = 0.0
 Identities = 327/409 (79%), Positives = 359/409 (87%), Gaps = 3/409 (0%)
 Frame = +2

Query: 35   KEIGAEALQPPDLSNMQRRIKEIVRILSNFKTLRQEGVTRKDYVEQLKRDLSSYYGYNEF 214
            +E+  EAL+PPDLSN+QRR KEIVR+LSNFK LRQ+G TRK+YVEQLK+DL +YYGYNEF
Sbjct: 139  EELDEEALRPPDLSNLQRRTKEIVRVLSNFKALRQDGSTRKEYVEQLKKDLCTYYGYNEF 198

Query: 215  LIGVLVEMFPVVELLELIESYEKPRPICLRTNTLKSRRRDLAEVLINRGVNCDPLSKWSK 394
            LIG LVEMFPVVEL+ELIE++EKPRPICLRTNTLK+RRRDLA+VLINRGVN DPLSKWSK
Sbjct: 199  LIGALVEMFPVVELMELIEAFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSK 258

Query: 395  VGLVVYDSQVPIGATPEYMAGYYMLQSASSFLPVMALAPQEKERVVDMAAAPGGKTTYIA 574
            VGLVVYDSQVPIGATPEYMAG+YMLQSASSFLPVMALAPQEKERVVDMAAAPGGKTTYIA
Sbjct: 259  VGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVVDMAAAPGGKTTYIA 318

Query: 575  ALMKNSGIIYANEVKEPRLKSLTANLQRMGVTNTIVCNYDGKELPKVLGQNTVDRVLLDA 754
            ALMKN+GII+ANE+K PRLKSLTANL RMGV+NT+VCNYDGKELPKVLG N VDRVLLDA
Sbjct: 319  ALMKNTGIIFANEMKVPRLKSLTANLHRMGVSNTVVCNYDGKELPKVLGVNAVDRVLLDA 378

Query: 755  PCSGTGVISKDESVKASKSFDDIQNSAFLQKQLILAAIDMVDANSKSGGYIVYSTCSIMI 934
            PCSGTGVISKDESVK SKS +DIQ  A LQK+LILAAIDMVDANSKSGGY+VYSTCSIM+
Sbjct: 379  PCSGTGVISKDESVKTSKSLEDIQKCAHLQKELILAAIDMVDANSKSGGYVVYSTCSIMV 438

Query: 935  SENEAVIDYALKKRDVQLVPCGLDFGRPGFTRFREHRFHPSLEKTRRFYPHVHNMDGFFV 1114
            +ENE+VIDYALKKRDV+LVPCGLDFGRPGFT+FRE RFHPSLEKTRRFYPHV NMDGFFV
Sbjct: 439  AENESVIDYALKKRDVKLVPCGLDFGRPGFTKFREQRFHPSLEKTRRFYPHVQNMDGFFV 498

Query: 1115 AKLXXXXXXXXXXXXXEPAE---TVEHAPVPEGSRSNINQDGGMSQQSE 1252
            AKL             E AE   T       E S   I ++G +S +SE
Sbjct: 499  AKLKKMSSSKPGAISSETAEKEDTTSFVEEKEKSSDGIKENGNVSSESE 547



 Score = 27.3 bits (59), Expect(2) = 0.0
 Identities = 10/16 (62%), Positives = 15/16 (93%)
 Frame = +3

Query: 3   EESDEFRLPTERKLEQ 50
           +ESDEFRLPT+ +L++
Sbjct: 128 QESDEFRLPTKEELDE 143


>ref|XP_002522787.1| Proliferating-cell nucleolar antigen p120, putative [Ricinus
            communis] gi|223538025|gb|EEF39638.1| Proliferating-cell
            nucleolar antigen p120, putative [Ricinus communis]
          Length = 624

 Score =  649 bits (1674), Expect(2) = 0.0
 Identities = 334/442 (75%), Positives = 366/442 (82%), Gaps = 3/442 (0%)
 Frame = +2

Query: 35   KEIGAEALQPPDLSNMQRRIKEIVRILSNFKTLRQEGVTRKDYVEQLKRDLSSYYGYNEF 214
            +E+  EA +PPDL N+QRRI+EIVR+LSN K L+QEG  RKDYVEQLK DL SYYGYN+F
Sbjct: 149  EELEDEARRPPDLQNLQRRIREIVRVLSNLKDLKQEGARRKDYVEQLKMDLCSYYGYNDF 208

Query: 215  LIGVLVEMFPVVELLELIESYEKPRPICLRTNTLKSRRRDLAEVLINRGVNCDPLSKWSK 394
            LIGVLVEMFPV EL+ELIE+ EKPRPICLRTNTLK+RRRDLA+VL+NRGVN DPLSKWSK
Sbjct: 209  LIGVLVEMFPVNELIELIEACEKPRPICLRTNTLKTRRRDLADVLLNRGVNLDPLSKWSK 268

Query: 395  VGLVVYDSQVPIGATPEYMAGYYMLQSASSFLPVMALAPQEKERVVDMAAAPGGKTTYIA 574
            VGLVVYDSQVPIGATPEYMAG+YMLQSA+SFLPVMALAPQEKER+VDMAAAPGGKTTYIA
Sbjct: 269  VGLVVYDSQVPIGATPEYMAGFYMLQSANSFLPVMALAPQEKERIVDMAAAPGGKTTYIA 328

Query: 575  ALMKNSGIIYANEVKEPRLKSLTANLQRMGVTNTIVCNYDGKELPKVLGQNTVDRVLLDA 754
            ALMKNSGIIYANE+K PRLKSLTANL RMGVTNTIVCNYDG+EL K+LG N VDRVLLDA
Sbjct: 329  ALMKNSGIIYANEIKVPRLKSLTANLHRMGVTNTIVCNYDGRELIKILGHNAVDRVLLDA 388

Query: 755  PCSGTGVISKDESVKASKSFDDIQNSAFLQKQLILAAIDMVDANSKSGGYIVYSTCSIMI 934
            PCSGTGVISKDESVK SKS DDIQ  A LQKQLILAAIDMVDANSKSGGYIVYSTCS+M+
Sbjct: 389  PCSGTGVISKDESVKTSKSLDDIQKCAHLQKQLILAAIDMVDANSKSGGYIVYSTCSMMV 448

Query: 935  SENEAVIDYALKKRDVQLVPCGLDFGRPGFTRFREHRFHPSLEKTRRFYPHVHNMDGFFV 1114
            +ENEAVIDYALKKRDV+LVPCGLDFGRPGF RFREHRFHPSLEKTRRFYPHVHNMDGFFV
Sbjct: 449  AENEAVIDYALKKRDVKLVPCGLDFGRPGFIRFREHRFHPSLEKTRRFYPHVHNMDGFFV 508

Query: 1115 AKLXXXXXXXXXXXXXEPAETVEHAPVPEGSRSNINQDGGMSQQSEA---PSSPEKENDL 1285
            AKL             EP E+VE A     S+S  N    + ++S       + EK   L
Sbjct: 509  AKLKKMSNSIPTAESSEPLESVEQASESNESKSEKNTAEPLKKKSVVKIEKGAREKGKGL 568

Query: 1286 IQAMKTMVKNGNSKPSETFEGT 1351
               +     NGN K +   + T
Sbjct: 569  SNGVS---DNGNVKSATAAKNT 587



 Score = 28.9 bits (63), Expect(2) = 0.0
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 3   EESDEFRLPTERKLE 47
           EESDEFRLPT+ +LE
Sbjct: 138 EESDEFRLPTKEELE 152