BLASTX nr result

ID: Coptis23_contig00001664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001664
         (1273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278391.1| PREDICTED: probable pyridoxal biosynthesis p...   499   e-139
gb|AAZ67141.1| pyridoxine biosynthesis protein [Lotus japonicus]      497   e-138
ref|XP_003593782.1| Pyridoxal biosynthesis protein PDX1.3 [Medic...   494   e-137
sp|Q39963.1|PDX1_HEVBR RecName: Full=Probable pyridoxal biosynth...   491   e-136
ref|NP_195761.1| Pyridoxal biosynthesis protein PDX1.3 [Arabidop...   491   e-136

>ref|XP_002278391.1| PREDICTED: probable pyridoxal biosynthesis protein PDX1-like [Vitis
            vinifera]
          Length = 309

 Score =  499 bits (1284), Expect = e-139
 Identities = 256/310 (82%), Positives = 273/310 (88%)
 Frame = +1

Query: 76   TGVVTLYGEASLTETKPSKTTSTFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 255
            +GVVT+YG  ++TETK S     FSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM
Sbjct: 4    SGVVTVYGNGAITETKKSP----FSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 59

Query: 256  ALERVPADIRAQGGVARMSDPALIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYIDE 435
            ALERVPADIRAQGGVARMSDP+LIKEIKQAVTIPVMAKARIGHFVEAQILEAIG+DY+DE
Sbjct: 60   ALERVPADIRAQGGVARMSDPSLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 119

Query: 436  SEVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRH 615
            SEVLT+ADEDNHINKHNFR+PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRH
Sbjct: 120  SEVLTVADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRH 179

Query: 616  VRDVMGDIRKLRNMDDDEVFTFAKKIMAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXL 795
            VR VMG+IR LRNMDDDEVFT+AKK+ APYDLVMQTKQLGRLPVVHF            L
Sbjct: 180  VRSVMGEIRVLRNMDDDEVFTYAKKLSAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAL 239

Query: 796  MMQLGCDXXXXXXXXXXXXDPARRARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNLKDE 975
            MMQLGCD            DPARRARAIVQAVTHYSDPD+LAEVSCGLGEAMVG+NL D+
Sbjct: 240  MMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLAEVSCGLGEAMVGINLNDD 299

Query: 976  GVERFAHRSE 1005
             VER+A+RSE
Sbjct: 300  KVERYANRSE 309


>gb|AAZ67141.1| pyridoxine biosynthesis protein [Lotus japonicus]
          Length = 310

 Score =  497 bits (1279), Expect = e-138
 Identities = 260/313 (83%), Positives = 272/313 (86%), Gaps = 1/313 (0%)
 Frame = +1

Query: 70   EETGVVTLYGE-ASLTETKPSKTTSTFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGAC 246
            E +GVVT+YG  A++TETK S     FSVKVGLAQMLRGGVIMDVVNA+QARIAEEAGAC
Sbjct: 2    EGSGVVTVYGNGAAITETKKSP----FSVKVGLAQMLRGGVIMDVVNAQQARIAEEAGAC 57

Query: 247  AVMALERVPADIRAQGGVARMSDPALIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDY 426
            AVMALERVPADIRAQGGVARMSDP LIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDY
Sbjct: 58   AVMALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDY 117

Query: 427  IDESEVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEA 606
            +DESEVLTLADEDNHINKHNFR+PFVCGCRNLGEALRR+REGAAMIRTKGEAGTGNIVEA
Sbjct: 118  VDESEVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRVREGAAMIRTKGEAGTGNIVEA 177

Query: 607  VRHVRDVMGDIRKLRNMDDDEVFTFAKKIMAPYDLVMQTKQLGRLPVVHFXXXXXXXXXX 786
            VRHVR VMGDIR LRNMDDDEVFTFAKKI APYDLVMQTKQLGRLPVVHF          
Sbjct: 178  VRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPAD 237

Query: 787  XXLMMQLGCDXXXXXXXXXXXXDPARRARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNL 966
              LMMQLGCD            DPA+RARAIVQAVTHYSDP +LAE+SCGLGEAMVGLNL
Sbjct: 238  AALMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPGLLAEISCGLGEAMVGLNL 297

Query: 967  KDEGVERFAHRSE 1005
             D  VERFA+RSE
Sbjct: 298  NDSNVERFANRSE 310


>ref|XP_003593782.1| Pyridoxal biosynthesis protein PDX1.3 [Medicago truncatula]
            gi|72256515|gb|AAZ67140.1| pyridoxine biosynthesis
            protein [Medicago truncatula] gi|355482830|gb|AES64033.1|
            Pyridoxal biosynthesis protein PDX1.3 [Medicago
            truncatula]
          Length = 314

 Score =  494 bits (1271), Expect = e-137
 Identities = 256/313 (81%), Positives = 272/313 (86%), Gaps = 1/313 (0%)
 Frame = +1

Query: 70   EETGVVTLYGEASLTETKPSKTTST-FSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGAC 246
            E +GVVT+YG  +LTET  + T S+ FSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGAC
Sbjct: 2    EGSGVVTVYGNGALTETTSTTTKSSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGAC 61

Query: 247  AVMALERVPADIRAQGGVARMSDPALIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDY 426
            AVMALERVPADIRAQGGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQILE++G+DY
Sbjct: 62   AVMALERVPADIRAQGGVARMSDPQLIKEIKAAVTIPVMAKARIGHFVEAQILESLGIDY 121

Query: 427  IDESEVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEA 606
            +DESEVLTLADEDNHINKHNFR+PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNI+EA
Sbjct: 122  VDESEVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEA 181

Query: 607  VRHVRDVMGDIRKLRNMDDDEVFTFAKKIMAPYDLVMQTKQLGRLPVVHFXXXXXXXXXX 786
            VRHVR V+GDIR LRNMD+DEVFTFAKKI APYDLVMQTKQLGRLPVV F          
Sbjct: 182  VRHVRSVLGDIRVLRNMDEDEVFTFAKKIGAPYDLVMQTKQLGRLPVVQFAAGGVATPAD 241

Query: 787  XXLMMQLGCDXXXXXXXXXXXXDPARRARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNL 966
              LMMQLGCD            DPA+RARAIVQAVTHYSDP+ILAEVSCGLGEAMVGLNL
Sbjct: 242  AALMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGEAMVGLNL 301

Query: 967  KDEGVERFAHRSE 1005
             D  VERFA+RSE
Sbjct: 302  TDHNVERFANRSE 314


>sp|Q39963.1|PDX1_HEVBR RecName: Full=Probable pyridoxal biosynthesis protein PDX1; AltName:
            Full=Ethylene-inducible protein HEVER
            gi|1209317|gb|AAA91063.1| ethylene-inducible protein
            [Hevea brasiliensis]
          Length = 309

 Score =  491 bits (1264), Expect = e-136
 Identities = 254/310 (81%), Positives = 268/310 (86%)
 Frame = +1

Query: 76   TGVVTLYGEASLTETKPSKTTSTFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 255
            TGVV +YG  ++TETK S     FSVKVGLAQMLRGGVIMDVVN EQARIAEEAGACAVM
Sbjct: 4    TGVVAVYGNGAITETKKSP----FSVKVGLAQMLRGGVIMDVVNPEQARIAEEAGACAVM 59

Query: 256  ALERVPADIRAQGGVARMSDPALIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYIDE 435
            ALERVPADIRAQGGVARMSDP LIKEIKQ+VTIPVMAKARIGHFVEAQILEAIG+DY+DE
Sbjct: 60   ALERVPADIRAQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDE 119

Query: 436  SEVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRH 615
            SEVLT ADE+NHINKHNFR+PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGN++EAVRH
Sbjct: 120  SEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRH 179

Query: 616  VRDVMGDIRKLRNMDDDEVFTFAKKIMAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXL 795
            VR VMGDIR LRNMDDDEVFTFAKKI APYDLVMQTKQLGRLPVV F            L
Sbjct: 180  VRSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAAL 239

Query: 796  MMQLGCDXXXXXXXXXXXXDPARRARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNLKDE 975
            MMQLGCD            DPARRARAIVQAVTHYSDPD+LAEVSCGLGEAMVG+NL D+
Sbjct: 240  MMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDMLAEVSCGLGEAMVGINLNDK 299

Query: 976  GVERFAHRSE 1005
             VERFA+RSE
Sbjct: 300  KVERFANRSE 309


>ref|NP_195761.1| Pyridoxal biosynthesis protein PDX1.3 [Arabidopsis thaliana]
            gi|297806077|ref|XP_002870922.1| hypothetical protein
            ARALYDRAFT_908014 [Arabidopsis lyrata subsp. lyrata]
            gi|45477193|sp|Q8L940.2|PDX13_ARATH RecName:
            Full=Pyridoxal biosynthesis protein PDX1.3;
            Short=AtPDX1.3; Short=AtPDX1;1
            gi|16226309|gb|AAL16130.1|AF428298_1 AT5g01410/T10O8_120
            [Arabidopsis thaliana]
            gi|17933287|gb|AAL48227.1|AF446352_1 AT5g01410/T10O8_120
            [Arabidopsis thaliana] gi|7320719|emb|CAB81924.1|
            pyridoxine biosynthesis protein-like [Arabidopsis
            thaliana] gi|20453411|gb|AAM19944.1| AT5g01410/T10O8_120
            [Arabidopsis thaliana] gi|65329268|gb|AAY42123.1|
            pyridoxine biosynthesis protein [Arabidopsis thaliana]
            gi|110742648|dbj|BAE99236.1| pyridoxine biosynthesis
            protein - like [Arabidopsis thaliana]
            gi|297316759|gb|EFH47181.1| hypothetical protein
            ARALYDRAFT_908014 [Arabidopsis lyrata subsp. lyrata]
            gi|332002957|gb|AED90340.1| Pyridoxal biosynthesis
            protein PDX1.3 [Arabidopsis thaliana]
            gi|333108791|gb|AEF15886.1| pyridoxine biosynthesis
            protein [Arabidopsis thaliana]
          Length = 309

 Score =  491 bits (1263), Expect = e-136
 Identities = 255/312 (81%), Positives = 268/312 (85%)
 Frame = +1

Query: 70   EETGVVTLYGEASLTETKPSKTTSTFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACA 249
            E TGVV +YG  ++TE K S     FSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACA
Sbjct: 2    EGTGVVAVYGNGAITEAKKSP----FSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACA 57

Query: 250  VMALERVPADIRAQGGVARMSDPALIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYI 429
            VMALERVPADIRAQGGVARMSDP +IKEIKQAVTIPVMAKARIGHFVEAQILEAIG+DYI
Sbjct: 58   VMALERVPADIRAQGGVARMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYI 117

Query: 430  DESEVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAV 609
            DESEVLTLADED+HINKHNFR+PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNI+EAV
Sbjct: 118  DESEVLTLADEDHHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAV 177

Query: 610  RHVRDVMGDIRKLRNMDDDEVFTFAKKIMAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXX 789
            RHVR V GDIR LRNMDDDEVFTFAKK+ APYDLVMQTKQLGRLPVV F           
Sbjct: 178  RHVRSVNGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADA 237

Query: 790  XLMMQLGCDXXXXXXXXXXXXDPARRARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNLK 969
             LMMQLGCD            DPARRARAIVQAVTHYSDP++L EVSCGLGEAMVG+NL 
Sbjct: 238  ALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEAMVGINLN 297

Query: 970  DEGVERFAHRSE 1005
            DE VERFA+RSE
Sbjct: 298  DEKVERFANRSE 309


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