BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001655
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   119   3e-25
emb|CBI20809.3| unnamed protein product [Vitis vinifera]              119   3e-25
emb|CAN69619.1| hypothetical protein VITISV_001620 [Vitis vinifera]   119   3e-25
ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ric...   114   8e-24
ref|XP_003560815.1| PREDICTED: DNA topoisomerase 1-like [Brachyp...   110   2e-22

>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/87 (65%), Positives = 70/87 (80%)
 Frame = -1

Query: 262  DRKGYSPKRASVGQMKNVDSITLEQALDWLQYPVLLGNHLEDGGPVYMKISKFGFTIRHK 83
            DRKGY PKRASV  +K+V SITLE AL+ L+YPV LGNH  D  PV +K++K GF+IRH+
Sbjct: 1079 DRKGYLPKRASVSHIKDVGSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHR 1138

Query: 82   RTIAPVPKNLDPKKITMEKAMKILLSK 2
            RTIAPVPKN+ P  IT+EKA+K+LL K
Sbjct: 1139 RTIAPVPKNIKPNDITLEKALKLLLGK 1165


>emb|CBI20809.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/87 (65%), Positives = 70/87 (80%)
 Frame = -1

Query: 262  DRKGYSPKRASVGQMKNVDSITLEQALDWLQYPVLLGNHLEDGGPVYMKISKFGFTIRHK 83
            DRKGY PKRASV  +K+V SITLE AL+ L+YPV LGNH  D  PV +K++K GF+IRH+
Sbjct: 911  DRKGYLPKRASVSHIKDVGSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHR 970

Query: 82   RTIAPVPKNLDPKKITMEKAMKILLSK 2
            RTIAPVPKN+ P  IT+EKA+K+LL K
Sbjct: 971  RTIAPVPKNIKPNDITLEKALKLLLGK 997


>emb|CAN69619.1| hypothetical protein VITISV_001620 [Vitis vinifera]
          Length = 672

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/87 (65%), Positives = 70/87 (80%)
 Frame = -1

Query: 262 DRKGYSPKRASVGQMKNVDSITLEQALDWLQYPVLLGNHLEDGGPVYMKISKFGFTIRHK 83
           DRKGY PKRASV  +K+V SITLE AL+ L+YPV LGNH  D  PV +K++K GF+IRH+
Sbjct: 103 DRKGYLPKRASVSHIKDVGSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHR 162

Query: 82  RTIAPVPKNLDPKKITMEKAMKILLSK 2
           RTIAPVPKN+ P  IT+EKA+K+LL K
Sbjct: 163 RTIAPVPKNIKPNDITLEKALKLLLGK 189


>ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223532629|gb|EEF34415.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 1071

 Score =  114 bits (285), Expect = 8e-24
 Identities = 50/84 (59%), Positives = 70/84 (83%)
 Frame = -1

Query: 262  DRKGYSPKRASVGQMKNVDSITLEQALDWLQYPVLLGNHLEDGGPVYMKISKFGFTIRHK 83
            DRKGY+PKRASV  +K+VD+ITLE AL+ L+YPV LGNH +DG P+ +K++K GF +RH+
Sbjct: 964  DRKGYTPKRASVSHIKDVDNITLEDALELLRYPVTLGNHPKDGHPIILKLAKVGFAVRHR 1023

Query: 82   RTIAPVPKNLDPKKITMEKAMKIL 11
            RTIA VPKN+ P  +++EKA+++L
Sbjct: 1024 RTIASVPKNMKPDNVSLEKALELL 1047


>ref|XP_003560815.1| PREDICTED: DNA topoisomerase 1-like [Brachypodium distachyon]
          Length = 877

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/87 (60%), Positives = 68/87 (78%)
 Frame = -1

Query: 262  DRKGYSPKRASVGQMKNVDSITLEQALDWLQYPVLLGNHLEDGGPVYMKISKFGFTIRHK 83
            DRKG S KRAS+ ++KNVDSITLE A++ LQYP +LG H +D  PV M  SK GF++RH+
Sbjct: 769  DRKGISQKRASLSEVKNVDSITLEDAIELLQYPKILGKHPDDEYPVLMTHSKAGFSVRHR 828

Query: 82   RTIAPVPKNLDPKKITMEKAMKILLSK 2
            RT+AP+PKN D KKIT+E A+K+L  K
Sbjct: 829  RTVAPLPKNTDLKKITLECALKLLAGK 855