BLASTX nr result
ID: Coptis23_contig00001650
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001650
(1596 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176805.1| FBD-associated F-box protein [Arabidopsis thali... 122 2e-25
ref|NP_175674.2| F-box/LRR-repeat protein [Arabidopsis thaliana]... 111 5e-22
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia... 111 6e-22
ref|NP_186953.1| F-box/LRR-repeat protein [Arabidopsis thaliana]... 110 1e-21
sp|Q9SSR7.1|FBL31_ARATH RecName: Full=F-box/LRR-repeat protein A... 110 1e-21
>ref|NP_176805.1| FBD-associated F-box protein [Arabidopsis thaliana]
gi|75333542|sp|Q9C8Y6.1|FBD5_ARATH RecName:
Full=FBD-associated F-box protein At1g66310
gi|12324396|gb|AAG52163.1|AC020665_8 unknown protein;
26122-24618 [Arabidopsis thaliana]
gi|67633490|gb|AAY78669.1| F-box family protein
[Arabidopsis thaliana] gi|332196372|gb|AEE34493.1|
FBD-associated F-box protein [Arabidopsis thaliana]
Length = 442
Score = 122 bits (307), Expect = 2e-25
Identities = 116/442 (26%), Positives = 198/442 (44%), Gaps = 14/442 (3%)
Frame = +2
Query: 23 RMKLSSTKEGMDRLSFLPDGIREHILSFLPMEEAVKTDILSSQWRDISGSLSNLEFDQRR 202
R++ + + +D L LP+ + HIL LP ++ VKT +LSS+WR++ + L+ D
Sbjct: 8 RVRAKQSDDEVDWLRDLPESLLCHILLNLPTKDVVKTSVLSSKWRNLWRLVPGLDLDSSD 67
Query: 203 FEEAEGKNRKAIDFQDSVDCFLINYNRPQIRSFSLKLF-HYDNPRITD-IHTNAWISFAV 376
F E N + F +D F+ ++ ++ F L+ F + + +++ H WI+ V
Sbjct: 68 FTE----NNTFVSF---IDRFMSFHSDLYLKKFKLRFFCNLNGDEVSENAHIARWINDVV 120
Query: 377 KHNVQELHLA-RIPQLPGRIFTCHTLTVLSLEAVEFHVRSMVSFPNLKRLVLSWCKLHGD 553
K V L L ++P ++ C++L L L V + S P +K +VL W K D
Sbjct: 121 KRKVHNLDLTWGAVEIPPILYLCNSLVSLKLCGVTLPNLELTSLPCVKVIVLEWVKFAND 180
Query: 554 NFTGNIFSCCPVLEHLILSGNSWYDFNAVIISPQNLKVFEYWKMSIGTFTDIYICTPNLQ 733
+ S C VLE L L + + +S Q+L F Y S D + N
Sbjct: 181 LALEMLISGCLVLESLTLCRRPNDNVKILRVSSQSLLRFSYNGSSYKGLHDDLVLEINAP 240
Query: 734 KITYLGMELPNISL----ETLSSLVSACFTI------FAKHCPDKN-LAEILMGLHNVAT 880
K+ L + ++ T SS+V A I K P +N + L G+ +V
Sbjct: 241 KLKILKLFSHQLTTSFIRNTSSSIVEADINIGLGKKFDPKDLPKRNVICNFLAGISSVKN 300
Query: 881 LRLYGSCLKVLSWDPDLAASLTSCCSLRRLQLVTDPFKDSVEVLILLLRTYPNLETLEIC 1060
L + L+V+ +D L C+L L + D + +S E+L + L + PNL++L +
Sbjct: 301 LFIAPCTLEVI-YDYSRCEPLPLFCNLSYLSV--DFYNNSWEILPIFLESCPNLKSLVVG 357
Query: 1061 FVSEDLESVLELSKELFDTYLSKHLTGHLMKHIKTIEIEDFQVAAEDELHIVKYLLENAT 1240
++ LS L+ ++ +EIE E+ +V YLLEN+
Sbjct: 358 SITSPKRRTSVLSG-----------PRRLLSSLEYVEIESPLTGEVFEMKLVSYLLENSP 406
Query: 1241 SLKEMKIKYHDKAQKDLKFRML 1306
LK++ I D ++K + +L
Sbjct: 407 ILKKLTINLDDSSRKKAECELL 428
>ref|NP_175674.2| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|51969366|dbj|BAD43375.1| F6D8.13 [Arabidopsis
thaliana] gi|332194713|gb|AEE32834.1| F-box/LRR-repeat
protein [Arabidopsis thaliana]
Length = 507
Score = 111 bits (278), Expect = 5e-22
Identities = 128/452 (28%), Positives = 198/452 (43%), Gaps = 36/452 (7%)
Frame = +2
Query: 47 EGMDRLSFLPDGIREHILSFLPMEEAVKTDILSSQWRDISGSLSNLEFDQRRF-EEAEGK 223
E MD +S LP+G+ +I SFL +EA T IL +WR++ + NL D F EGK
Sbjct: 41 EKMDHVSSLPEGVLCNIFSFLTTKEAALTSILCKRWRNLLAFVPNLVIDDSVFLHPEEGK 100
Query: 224 NRK---AIDFQDSVDCFLINYNRPQIRSFSLKLFHYDNPRITDIHTNAWISFAVKHNVQE 394
+ F + VD L I+ FSLK F D NAWIS + V E
Sbjct: 101 EERYEIQQSFMEFVDRVLALQGNSPIKKFSLK-FRTD---FASHRVNAWISNVLARGVSE 156
Query: 395 LHL------ARIPQLPGRIFTCHTLTVLSLEAVEFH-VRSMVSFPNLKRLVLSWCKLHGD 553
L + A L + F L L + ++ + + P LK LVL KL D
Sbjct: 157 LDVLVILYGAEFLPLSPKCFKSRNLVTLKINSLGIDWLAGDIFLPMLKTLVLHSVKLCVD 216
Query: 554 NFTGNIFSCCPVLEHLILSGNSWYDFNAVIISPQNLKV----FEYWKMSIGTFTDIYICT 721
F F P LE L+L SW D V +S ++K F Y+ +GT + + T
Sbjct: 217 KF---FFRALPALEELVLFAVSWRD-RDVTVSNASIKTLTIKFNYY---LGTLS---LDT 266
Query: 722 PNLQKITY---LGMELPNISLETLS----SLVSACFTIFAKHCPD------------KNL 844
P+L + + + P +E LS SL+ + I P+ N+
Sbjct: 267 PSLVSFCFSDHVAKDYPLAKMEKLSEARISLLVTEYQIERARAPNIYWVEDDVVLRLVNV 326
Query: 845 AEILMGLHNVATLRLYGSCLKVLSWDPDLAASLTSCCSLRRLQLVTDPFKDSVEVLILLL 1024
+++ G+ NV L L + L+VLS S+ +L+ L + ++ + + + +LL
Sbjct: 327 GKLMKGIRNVQYLNLSPNTLEVLS---KCCESMPLFNNLKSLTIESNE-RRGWQAMPVLL 382
Query: 1025 RTYPNLETLEICFVSEDLESVLELSKELFDTYLSKHLTGHLMK--HIKTIEIEDFQVAAE 1198
R P+LETL + L V E + D +S+ G + +K +EI+ FQ
Sbjct: 383 RNCPHLETL---VLEGLLHHVTEKCRNACDC-VSQEEKGRSLTSCQVKVLEIKGFQ-GTT 437
Query: 1199 DELHIVKYLLENATSLKEMKIKYHDKAQKDLK 1294
E+H +K+ LE+ L+E+KI + L+
Sbjct: 438 KEMHTIKHFLEHFPCLREIKIHMEENGPTQLR 469
>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
[Arabidopsis thaliana]
Length = 443
Score = 111 bits (277), Expect = 6e-22
Identities = 112/444 (25%), Positives = 189/444 (42%), Gaps = 22/444 (4%)
Frame = +2
Query: 26 MKLSSTKEGMDRLSFLPDGIREHILSFLPMEEAVKTDILSSQWRDISGSLSNLEFDQRRF 205
M LS ++ D +S LPD I HILSFLP +EA T +LS +WR + + NL+ D +
Sbjct: 1 MDLSGSR---DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVY 57
Query: 206 EEAEGKNRKAIDFQDSVDCFLINYNRPQIRSFSLKLFHYDNPRITDIHTNAWISFAVKHN 385
E + + F D VD L + FSLK+ I + WI+ ++
Sbjct: 58 LNPENETEISTSFMDFVDRVLALQGNSPLHKFSLKI----GDGIDPVRIIPWINNVLERG 113
Query: 386 VQELHLARIPQ----LPGRIFTCHTLTVLSLEAVEFHVRSM--VSFPNLKRLVL--SWCK 541
V +L L + LP +++ C TL L L + + V P LK L + + +
Sbjct: 114 VSDLDLHLNLESEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFE 173
Query: 542 LHGDNFTGNIFSCCPVLEHLILSGNSWYDFNAVIISPQNLKVFEY-WKMSIGTFTDIYIC 718
HG T + S CP+LE L+L SW+ ++ +S LK + W+ + +
Sbjct: 174 EHGVGLT-KLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVLLD 232
Query: 719 TPNLQKITYLGMELPNISLETLSSLVSACFTI-------------FAKHCPDKNLAEILM 859
TPNL + + L SLV A + + ++ N + +M
Sbjct: 233 TPNLVYLKFTDTVAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNATDFIM 292
Query: 860 GLHNVATLRLYGSCLKVLSWDPDLAASLTSCCSLRRLQLVTDPFKDSVEVLILLLRTYPN 1039
+ NV TL L + L+VL++ D ++ +L L + ++P + + + LL+ PN
Sbjct: 293 RICNVKTLYLSANTLQVLTYSCD---AIPIFNNLTHLTIESNP-RVGWQSVPGLLKNSPN 348
Query: 1040 LETLEICFVSEDLESVLELSKELFDTYLSKHLTGHLMKHIKTIEIEDFQVAAEDELHIVK 1219
LETL + + IK ++ + E + +K
Sbjct: 349 LETL-------------------------------IFQVIKILKFGENSDDMEKQREQIK 377
Query: 1220 YLLENATSLKEMKIKYHDKAQKDL 1291
Y LE +L++M + Y+ + +D+
Sbjct: 378 YFLETMPNLEKMILYYNTPSVEDV 401
>ref|NP_186953.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|75264861|sp|Q9M8U4.1|FBL41_ARATH RecName:
Full=F-box/LRR-repeat protein At3g03030
gi|6728959|gb|AAF26957.1|AC018363_2 unknown protein
[Arabidopsis thaliana] gi|30102686|gb|AAP21261.1|
At3g03030 [Arabidopsis thaliana]
gi|110735742|dbj|BAE99850.1| hypothetical protein
[Arabidopsis thaliana] gi|332640373|gb|AEE73894.1|
F-box/LRR-repeat protein [Arabidopsis thaliana]
Length = 474
Score = 110 bits (275), Expect = 1e-21
Identities = 119/442 (26%), Positives = 197/442 (44%), Gaps = 39/442 (8%)
Frame = +2
Query: 53 MDRLSFLPDGIREHILSFLPMEEAVKTDILSSQWRDISGSLSNLEFDQRRF---EEAEGK 223
MD +S LPD +R HILSFL +E+ T +LS +WR++ + NL+ D + EE + +
Sbjct: 1 MDLVSSLPDDVRCHILSFLTTKESALTSVLSKKWRNLFTLVPNLDLDDSEYLHPEETKWE 60
Query: 224 NRKAID-FQDSVDCFLINYNRPQIRSFSLKLFHYDNPRITDIHTNAWISFAVKHNVQELH 400
+ +D F D V+ L IR FSL+ + N W+ ++ V +L
Sbjct: 61 REEILDSFLDFVERVLSLQGNGPIRRFSLRC----ESGVPPARLNRWLCKVLQRGVADLE 116
Query: 401 LARIPQ----LPGRIFTCHTLTVLSLEA----VEFHVRSMVSF-PNLKRLVLSWCKLHGD 553
L + LP +F TL L L++ + + + +F P L+ L +S + D
Sbjct: 117 LIIDFEDGYLLPRELFVSETLVNLRLKSEFGCIHWWPGAEGTFLPRLQSLDISSAMVFCD 176
Query: 554 NFTGNIFSCCPVLEHLILSGNSWYDFNAVIISPQNLKVFEYWKMSIGTFT-----DIYIC 718
+ + C PV+E L L G W D + V +S L + S G+ T +
Sbjct: 177 DKLQKLLPCFPVIEELRLVGMEWID-SHVTVSCATL-TNQLLLSSTGSRTSKNPKSVSFD 234
Query: 719 TPNLQKITYLGMELPNISLETLSSLVSACF-------TIFAKHCPDK------------N 841
TPNL + Y + + L + SL A I P N
Sbjct: 235 TPNLLSLAYSDLVAEDYPLVNMKSLFKARIILGVDDDQIARMRAPTNYLSEDDVVRRFGN 294
Query: 842 LAEILMGLHNVATLRLYGSCLKVLSWDPDLAASLTSCCSLRRLQLVTDPFKDSVEVLILL 1021
+ +++ G+ NV L L+ L+VLS S+ +++ L + +D + + + L
Sbjct: 295 VVKLMKGIQNVQQLHLHSDTLEVLSM---CCESMPVFNNVKTLGIKSD-YDRGWQAVPAL 350
Query: 1022 LRTYPNLETLEICFVSEDLESVLELSKELFDTYLSKHLTGHLMKH--IKTIEIEDFQVAA 1195
LR P+LETL + V + + D K G +K +K +EI++F+V
Sbjct: 351 LRNCPHLETLTF---EGLVHHVTDKCGDACDCIFRKD-KGRSLKSCPVKVVEIKEFRVTM 406
Query: 1196 EDELHIVKYLLENATSLKEMKI 1261
+ E+H++++ L+N LKEMKI
Sbjct: 407 K-EMHLIEHFLDNFPCLKEMKI 427
>sp|Q9SSR7.1|FBL31_ARATH RecName: Full=F-box/LRR-repeat protein At1g52650
gi|5903041|gb|AAD55600.1|AC008016_10 F6D8.13 [Arabidopsis
thaliana] gi|38603840|gb|AAR24665.1| At1g52650
[Arabidopsis thaliana] gi|51969374|dbj|BAD43379.1|
F6D8.13 [Arabidopsis thaliana]
Length = 465
Score = 110 bits (275), Expect = 1e-21
Identities = 127/450 (28%), Positives = 197/450 (43%), Gaps = 36/450 (8%)
Frame = +2
Query: 53 MDRLSFLPDGIREHILSFLPMEEAVKTDILSSQWRDISGSLSNLEFDQRRF-EEAEGKNR 229
MD +S LP+G+ +I SFL +EA T IL +WR++ + NL D F EGK
Sbjct: 1 MDHVSSLPEGVLCNIFSFLTTKEAALTSILCKRWRNLLAFVPNLVIDDSVFLHPEEGKEE 60
Query: 230 K---AIDFQDSVDCFLINYNRPQIRSFSLKLFHYDNPRITDIHTNAWISFAVKHNVQELH 400
+ F + VD L I+ FSLK F D NAWIS + V EL
Sbjct: 61 RYEIQQSFMEFVDRVLALQGNSPIKKFSLK-FRTD---FASHRVNAWISNVLARGVSELD 116
Query: 401 L------ARIPQLPGRIFTCHTLTVLSLEAVEFH-VRSMVSFPNLKRLVLSWCKLHGDNF 559
+ A L + F L L + ++ + + P LK LVL KL D F
Sbjct: 117 VLVILYGAEFLPLSPKCFKSRNLVTLKINSLGIDWLAGDIFLPMLKTLVLHSVKLCVDKF 176
Query: 560 TGNIFSCCPVLEHLILSGNSWYDFNAVIISPQNLKV----FEYWKMSIGTFTDIYICTPN 727
F P LE L+L SW D V +S ++K F Y+ +GT + + TP+
Sbjct: 177 ---FFRALPALEELVLFAVSWRD-RDVTVSNASIKTLTIKFNYY---LGTLS---LDTPS 226
Query: 728 LQKITY---LGMELPNISLETLS----SLVSACFTIFAKHCPD------------KNLAE 850
L + + + P +E LS SL+ + I P+ N+ +
Sbjct: 227 LVSFCFSDHVAKDYPLAKMEKLSEARISLLVTEYQIERARAPNIYWVEDDVVLRLVNVGK 286
Query: 851 ILMGLHNVATLRLYGSCLKVLSWDPDLAASLTSCCSLRRLQLVTDPFKDSVEVLILLLRT 1030
++ G+ NV L L + L+VLS S+ +L+ L + ++ + + + +LLR
Sbjct: 287 LMKGIRNVQYLNLSPNTLEVLS---KCCESMPLFNNLKSLTIESNE-RRGWQAMPVLLRN 342
Query: 1031 YPNLETLEICFVSEDLESVLELSKELFDTYLSKHLTGHLMK--HIKTIEIEDFQVAAEDE 1204
P+LETL + L V E + D +S+ G + +K +EI+ FQ E
Sbjct: 343 CPHLETL---VLEGLLHHVTEKCRNACDC-VSQEEKGRSLTSCQVKVLEIKGFQ-GTTKE 397
Query: 1205 LHIVKYLLENATSLKEMKIKYHDKAQKDLK 1294
+H +K+ LE+ L+E+KI + L+
Sbjct: 398 MHTIKHFLEHFPCLREIKIHMEENGPTQLR 427