BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001649
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_189863.1| putative F-box/LRR-repeat protein [Arabidopsis ...    92   1e-16
ref|XP_002875646.1| hypothetical protein ARALYDRAFT_905516 [Arab...    89   1e-15
ref|NP_176803.1| putative F-box/FBD/LRR-repeat protein [Arabidop...    89   2e-15
ref|NP_190484.3| FBD and preprotein translocase YidC domain-cont...    88   2e-15
ref|NP_198999.1| putative F-box/LRR-repeat protein [Arabidopsis ...    87   5e-15

>ref|NP_189863.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264552|sp|Q9M190.1|FBL49_ARATH RecName:
           Full=Putative F-box/LRR-repeat protein At3g42770
           gi|7529736|emb|CAB86697.1| putative protein [Arabidopsis
           thaliana] gi|332644228|gb|AEE77749.1| putative
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 532

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 88/286 (30%), Positives = 124/286 (43%), Gaps = 17/286 (5%)
 Frame = +2

Query: 2   SFLPMEDAVKTSILSSQWRDICGSLSNLDFDQCKFVQAGRR--NRKTI--DFRNFVYCFL 169
           SFLP ++A  TS+LS +WR +     NLDFD    +Q+ +R  N + I   F  FV   L
Sbjct: 14  SFLPTKEATSTSLLSKRWRTLFTLSPNLDFDNSLLLQSKKRKWNMRNIQKSFVGFVDSTL 73

Query: 170 HNYSRPQIRSFKLKLSDFVGPHITDIHTNAWISFAVKHNVQELHLAC----LPQLPGRIF 337
                  I+SF LK  + +G    ++  N WI  A++H V ELHL         LP  IF
Sbjct: 74  ALQGGKGIKSFSLKFKETLGDVNGEVDVNRWICNALEHGVSELHLRIDYTKRCHLPSEIF 133

Query: 338 TCHTLTVLSLEAVEFH--VRSMVSFPNLKRLELSWCKLHGDNFTGNIFSCCPVLEHLILF 511
           T   L  LSL        V + +S P+LK L L         F     + CP LE L ++
Sbjct: 134 TSTKLVKLSLVTQSCFPVVPNCISLPSLKVLFLDSIWFEVPQFL-IFLTACPALEDLTIY 192

Query: 512 GDLWYDFNAIIISPQNLKEFEYWNDNMGTFTD-----IYTPNLQKITYLGMELPNISSET 676
                      IS + +K         G F D       TP++  + Y            
Sbjct: 193 QKPHSVGMPYHISSKTIKRLSV-TYTCGYFVDYGLKLFNTPSVVDLYYSDYVRHKYPHMN 251

Query: 677 LSSLVSACFTLYAHHCPDK--NLAKILNGLHNVATLHLFGGCLELL 808
           L SL  A  TL  H   D   N+ ++L+G+ NV TLHL    ++++
Sbjct: 252 LDSLPKA--TLDIHFLDDNAANVTELLSGIRNVKTLHLTSSTVKVI 295


>ref|XP_002875646.1| hypothetical protein ARALYDRAFT_905516 [Arabidopsis lyrata subsp.
           lyrata] gi|297321484|gb|EFH51905.1| hypothetical protein
           ARALYDRAFT_905516 [Arabidopsis lyrata subsp. lyrata]
          Length = 400

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 94/303 (31%), Positives = 138/303 (45%), Gaps = 34/303 (11%)
 Frame = +2

Query: 2   SFLPMEDAVKTSILSSQWRDICGSLSNLDFDQCKFVQA------GRRNRKTIDFRNFVYC 163
           SFL  ++A  T +LS +WR +     NLDFD    +         RR+ K   F +FV  
Sbjct: 22  SFLTTKEAASTFVLSKRWRTLFALSHNLDFDNMNLLDTEDLLKHSRRHIKK-SFNDFVDH 80

Query: 164 FLHNYSRPQIRSFKLKLSDFVGPHITDIH-TNAWISFAVKHNVQELHLACLPQL------ 322
            L  +    I+ F L+LSD    HI ++H  + WI  A++  V +LHL    +L      
Sbjct: 81  TLALHGNNTIKKFSLELSD---THIDNLHDVDRWICNALERGVSDLHLGIESELFLWSGF 137

Query: 323 PGRIFTCHTLTVLSL-EAVEFHVRSM---VSFPNLKRLELS---WCKLHGDNFTGNIF-S 478
           P ++FT  TL  LSL     F+  S+   +S P LK L L    W K  GD    N+F +
Sbjct: 138 PSKVFTSTTLVKLSLGVGTRFYTESVPSDLSLPALKVLFLDSIIWFK--GDLQLLNVFLA 195

Query: 479 CCPVLEHLILFGDLWYDFNAIIISPQNLKE----FEYWNDNMGTFTDIY---TPNLQKI- 634
            CP LE L +   +    N  +IS + +K+    + Y  D  G F+ I    TPN+    
Sbjct: 196 ACPALEDLTIH-YMCGSENPHVISSKTIKKLSFTYGYIYDYYGYFSRIISFDTPNVVDFY 254

Query: 635 --TYLGMELPNISSETLSSLVSACFTLYAHHCPDKNLAKI---LNGLHNVATLHLFGGCL 799
              Y G E P    ++++       TL  H      +A +   ++G+ NV TLHL    +
Sbjct: 255 YSDYFGSESPQRHFDSIAKA-----TLDLHFLKGDKIADVTDLISGIRNVKTLHLNSSTV 309

Query: 800 ELL 808
           E L
Sbjct: 310 ECL 312


>ref|NP_176803.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75262213|sp|Q9C8Y8.1|FDL7_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At1g66290
           gi|12324394|gb|AAG52161.1|AC020665_6 hypothetical
           protein; 16490-14953 [Arabidopsis thaliana]
           gi|332196370|gb|AEE34491.1| putative
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 453

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 78/289 (26%), Positives = 121/289 (41%), Gaps = 22/289 (7%)
 Frame = +2

Query: 8   LPMEDAVKTSILSSQWRDICGSLSNLDFDQCKFVQAGRRNRKTIDFRNFVYCFLHNYSRP 187
           LP +D +KTS+LS++WR+I   +  LD D   F +            +F+  F+   S  
Sbjct: 46  LPTKDVIKTSVLSTKWRNIWRYVPRLDLDNRHFTEFD-------SLASFIDRFMR--SNR 96

Query: 188 QIRSFKLKL-SDFVGPHITDIHTNAWISFAVKHNVQELHLACLPQLPG-----RIFTCHT 349
           ++  FKL+  SD  G       +  WI  A+K  VQ + +      PG      I+ C +
Sbjct: 97  KVNKFKLRCGSDLDGDVDLATCSWKWIYMAIKRKVQHIDVTW----PGVRIYPEIYNCES 152

Query: 350 LTVLSLEAVEFHVRSMVSFPNLKRLELSWCKLHGDNFTGNIFSCCPVLEHLILFGDLWYD 529
           L  L L  V       VS P+LK L L W + + +     + S CPVLE   L      +
Sbjct: 153 LVSLKLSEVTLTKPEFVSLPSLKVLVLDWVEFYNEFAFDMLMSGCPVLESFTLCRRYLDN 212

Query: 530 FNAIIISPQNLKEFEYWNDNMGTFTD-----IYTPNLQKITYLGMELPNISSETLSSLVS 694
              + +  Q+L  F Y+  +  +F D     +  P L+K+        +   E LSSLV 
Sbjct: 213 VRVLRVISQSLLSFNYYGSSSKSFRDDLVVILDAPKLEKLKLSHQLTASFIIENLSSLVE 272

Query: 695 ACFTLYAHHCPDKN-----------LAKILNGLHNVATLHLFGGCLELL 808
           A   +  + C  K            +   L GL  V T+ +    LE++
Sbjct: 273 ADIDIEFNFCRGKKFDPDDLPKREMIRNFLVGLSRVKTMTIAACTLEVI 321


>ref|NP_190484.3| FBD and preprotein translocase YidC domain-containing protein
           [Arabidopsis thaliana]
           gi|334302800|sp|Q9M3B7.2|FBL54_ARATH RecName:
           Full=Putative F-box/LRR-repeat protein At3g49150
           gi|332644984|gb|AEE78505.1| FBD and preprotein
           translocase YidC domain-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 82/291 (28%), Positives = 115/291 (39%), Gaps = 21/291 (7%)
 Frame = +2

Query: 2   SFLPMEDAVKTSILSSQWRDICGSLSNLDFDQCKFVQAGRRNRKTIDFRNFVYCFLHNYS 181
           SFLP+ED+  TS+LS +W+ +     NL+FD           R    F NFV   L    
Sbjct: 31  SFLPIEDSALTSVLSKKWQHLFAFRPNLEFDDAVVYLNPDGERNETIFENFVDRVLSLQG 90

Query: 182 RPQIRSFKLKLSDFVGPHITDIHTNAWISFAVKHNVQELHLACL-----PQLPGRIFTCH 346
              I  F L   DF  P       + WIS  ++  V +L L C+       +P  IF   
Sbjct: 91  DYPINKFSLTCRDFTDPTC----VSRWISNVMERGVSDLDLRCIVYWDNGTMPPDIFVSK 146

Query: 347 TLTVLSLEAVE--FHVRSMVSFPNLKRLELSWCKL-HGDNFTGNIFSCCPVLEHLILFGD 517
            L  L +E     F     V  PNLK L L+   L H DN    + + C VLE L +   
Sbjct: 147 ALVHLRIETGNGAFIDVEDVFLPNLKTLYLNKVLLRHSDNGFVKLITSCHVLEDLFIMNI 206

Query: 518 LWYDFNAIIISPQNLKEFEYWNDNMGTF----TDIYTPNLQKITYLGMELPNISSETLSS 685
            W  +    +S + LK   ++ +++           TPNL    Y         +    S
Sbjct: 207 CWDGYLKRSLSSKTLKRLTFFCEDVHAVNPESVSFDTPNLVYFVYHDCVADKYKNMNFDS 266

Query: 686 LV--SACFTLYAHHCPDK-------NLAKILNGLHNVATLHLFGGCLELLS 811
           LV  S C  + +H            N    L G+ NV  L LF   +E+L+
Sbjct: 267 LVYASICLQMTSHQRTHASYEHLVGNATDFLLGISNVQILELFANTIEVLT 317


>ref|NP_198999.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75262537|sp|Q9FJ30.1|FBL88_ARATH RecName:
           Full=Putative F-box/LRR-repeat protein At5g41840
           gi|10177368|dbj|BAB10659.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007352|gb|AED94735.1|
           putative F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 540

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 84/320 (26%), Positives = 132/320 (41%), Gaps = 50/320 (15%)
 Frame = +2

Query: 2   SFLPMEDAVKTSILSSQWRDICGSLSNLDF-DQCKFVQAGRRNRKTIDFRNFV-----YC 163
           SFLP ++A  T++L+ +W+ +   + NL+F D   F    RRN+ +  + +F+       
Sbjct: 29  SFLPTKEAASTTVLAKRWKPLLAFVPNLNFDDSIYFHPRARRNKYSKSYESFMSFVDSVL 88

Query: 164 FLHNYSRPQIRSFKLKLSDFVGPHITDIHTNAWISFAVKHNVQELHL-----------AC 310
            L   ++  ++ F +K  D V           WI   +K  V ++ L           + 
Sbjct: 89  ALQAKTKTPLKRFHVKCEDVV----DQSWVLEWIPKVLKRGVLDIDLHITSSRNYCENSS 144

Query: 311 LPQLPGRIFTCHTLTVLSL---EAVEFHVRSMVSFPNLKRLELSWCKLHGDNFTGNIFSC 481
              LP +IF   TL  L +   + V   V   VS P LK L L + K+   +    + S 
Sbjct: 145 FYSLPSKIFVSKTLVRLKIQFQDGVHIDVEGGVSLPKLKTLHLDYFKIE-TSMLNKLLSG 203

Query: 482 CPVLEHLILFGDLWYDFNA-----IIISPQNLK-------------EFEYWND------N 589
           C  LE L+L   +W D +      + +S   LK             EF ++ D      N
Sbjct: 204 CHALEELVLANLMWADSSEDEACHVSVSIPTLKRLNFCRSEDFYEGEFHFYEDYDEENIN 263

Query: 590 MGTFTDIYTPNLQKITYLGMELPNISSETLSSLVSACFTLYAHHCPDK------NLAKIL 751
            G       PNL  + Y  + +      +  SLV A   L     PD+      N+ K+L
Sbjct: 264 EGVSLSFDNPNLVYLEYSDVIVDKYKQVSFDSLVEA--NLRLRKTPDQDETDKVNVTKLL 321

Query: 752 NGLHNVATLHLFGGCLELLS 811
            G+HNV  L+L    LE+LS
Sbjct: 322 MGIHNVKILYLSDDTLEVLS 341