BLASTX nr result

ID: Coptis23_contig00001647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001647
         (1579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321201.1| predicted protein [Populus trichocarpa] gi|2...   474   e-131
ref|XP_002534363.1| Kelch domain-containing protein, putative [R...   458   e-126
ref|XP_002267128.1| PREDICTED: nitrile-specifier protein 5 [Viti...   449   e-124
ref|XP_003531506.1| PREDICTED: nitrile-specifier protein 5-like ...   444   e-122
ref|NP_566316.1| galactose oxidase/kelch repeat-containing prote...   443   e-122

>ref|XP_002321201.1| predicted protein [Populus trichocarpa] gi|222861974|gb|EEE99516.1|
            predicted protein [Populus trichocarpa]
          Length = 331

 Score =  474 bits (1219), Expect = e-131
 Identities = 223/325 (68%), Positives = 254/325 (78%), Gaps = 3/325 (0%)
 Frame = +2

Query: 335  GGKWAKLGQKKGTGPGARSSHAIAVVGHKAYIFGGEFSPRVPVDNNLHVYDLEAHTWAVA 514
            GGKW KL QK GTG GARSSHAI +VGH+AY FGGEF+PRVPVDN LHV++L+  TW+VA
Sbjct: 7    GGKWVKLNQK-GTGLGARSSHAITLVGHEAYAFGGEFAPRVPVDNKLHVFNLQTLTWSVA 65

Query: 515  DATGDIPPPRVGVTLAAVKDTIYSYGGRDSTHKELNEFYSFDTSTNKWTLL---PSGPAN 685
            D TGDIPPPRVGVT+A V  TIY +GGRD+THKELNE YSFDTSTN+WTLL    +GP +
Sbjct: 66   DGTGDIPPPRVGVTMATVGKTIYVFGGRDATHKELNELYSFDTSTNQWTLLSNGDAGPPH 125

Query: 686  RSYHSMTSDDKKIYVFGGCGVNGRLNDLWSFDVVDHTWVQYPLPGDNLKGRGGPGLTVSS 865
            RSYHS  SDD+ +Y+FGGCGV GRLNDLW +DV++  WV+YP PGDN KGRGG GL V+ 
Sbjct: 126  RSYHSTASDDRHVYIFGGCGVAGRLNDLWEYDVIEKKWVKYPTPGDNCKGRGGTGLAVA- 184

Query: 866  LNGKIWVVYGFAGQETDDVHCFDPVNGVWTQVDTSGDKPTPRSVFSTXXXXXXXXXXXXX 1045
              GKIWVVYGF+G E +DVHCFDP+ G WTQVDTSG+KP+ RSVFST             
Sbjct: 185  -QGKIWVVYGFSGVEMNDVHCFDPIQGTWTQVDTSGEKPSARSVFSTVGIGKYIIISGGE 243

Query: 1046 XDPSDLGHLGAGKFAGDGYALDTETGVWRRFEDTSDDLADHPGPRGWCAYSSGCLNGKDG 1225
             DPSDLGHLGAGKFA + YALDT+T  W+R  D      DHPGPRGWCA++ GCLNG  G
Sbjct: 244  VDPSDLGHLGAGKFASEAYALDTDTLTWKRLNDGLGS-DDHPGPRGWCAFAGGCLNGNQG 302

Query: 1226 LLVYGGNSPSNDRLDDIFFFTPYFD 1300
            LLV GGNSPSNDRLDDIFFFTP  D
Sbjct: 303  LLVCGGNSPSNDRLDDIFFFTPCVD 327


>ref|XP_002534363.1| Kelch domain-containing protein, putative [Ricinus communis]
            gi|223525429|gb|EEF28020.1| Kelch domain-containing
            protein, putative [Ricinus communis]
          Length = 327

 Score =  458 bits (1178), Expect = e-126
 Identities = 220/325 (67%), Positives = 246/325 (75%), Gaps = 3/325 (0%)
 Frame = +2

Query: 338  GKWAKLGQKKGTGPGARSSHAIAVVGHKAYIFGGEFSPRVPVDNNLHVYDLEAHTWAVAD 517
            GKW +L QK GTGPGARSSHAI +VG KAY FGGEFSPRVPVDNNLHV+DL+   W++ +
Sbjct: 4    GKWVELDQK-GTGPGARSSHAITIVGPKAYAFGGEFSPRVPVDNNLHVFDLQTQAWSIPE 62

Query: 518  ATGDIPPPRVGVTLAAVKDTIYSYGGRDSTHKELNEFYSFDTSTNKWTLLP---SGPANR 688
             TGDIPPPRVGVT+AAV  TIY +GGRD+THKELNE YSFDT TN W LL    +GPA+R
Sbjct: 63   VTGDIPPPRVGVTMAAVGKTIYVFGGRDTTHKELNELYSFDTCTNNWILLSTGVTGPAHR 122

Query: 689  SYHSMTSDDKKIYVFGGCGVNGRLNDLWSFDVVDHTWVQYPLPGDNLKGRGGPGLTVSSL 868
            SYHS TSDD+ +Y+FGGCGV GRLNDLW++D VD  WV YP PGDN KGRGGPGL V+  
Sbjct: 123  SYHSTTSDDRYVYIFGGCGVAGRLNDLWAYDTVDQKWVNYPSPGDNCKGRGGPGLAVA-- 180

Query: 869  NGKIWVVYGFAGQETDDVHCFDPVNGVWTQVDTSGDKPTPRSVFSTXXXXXXXXXXXXXX 1048
             GKIWVVYGFAG E DDVH +DPV+  W QV TSG+KP  RSVFST              
Sbjct: 181  QGKIWVVYGFAGMEMDDVHRYDPVHETWDQVQTSGEKPMARSVFSTIGIGKYIIIYGGEI 240

Query: 1049 DPSDLGHLGAGKFAGDGYALDTETGVWRRFEDTSDDLADHPGPRGWCAYSSGCLNGKDGL 1228
            DPS LGHLGAGKF GD YALDTE  +W + +D       HPGPRGWCA++SG L GK GL
Sbjct: 241  DPSHLGHLGAGKFTGDLYALDTENLIWMKLDD-GPGSKSHPGPRGWCAFASGSLGGKLGL 299

Query: 1229 LVYGGNSPSNDRLDDIFFFTPYFDG 1303
            LVYGGNSPSNDRLDDIFF T   DG
Sbjct: 300  LVYGGNSPSNDRLDDIFFLTLCLDG 324


>ref|XP_002267128.1| PREDICTED: nitrile-specifier protein 5 [Vitis vinifera]
          Length = 327

 Score =  449 bits (1155), Expect = e-124
 Identities = 211/326 (64%), Positives = 254/326 (77%), Gaps = 3/326 (0%)
 Frame = +2

Query: 338  GKWAKLGQKKGTGPGARSSHAIAVVGHKAYIFGGEFSPRVPVDNNLHVYDLEAHTWAVAD 517
            G W KL Q  GTGPGARSSHAIA+VG KAY+FGGE +PRVPVDN++HV+DL+  TW+VA 
Sbjct: 6    GNWIKLDQN-GTGPGARSSHAIAIVGQKAYVFGGELTPRVPVDNDIHVFDLQDLTWSVAT 64

Query: 518  ATGDIPPPRVGVTLAAVKDTIYSYGGRDSTHKELNEFYSFDTSTNKWTLLPS---GPANR 688
             TGD+PPPR+GV +AAV  TIY +GGRD THKELNE YSFDT +NKWTLL S   GP +R
Sbjct: 65   VTGDVPPPRIGVGMAAVGGTIYVFGGRDGTHKELNELYSFDTFSNKWTLLSSGDAGPPHR 124

Query: 689  SYHSMTSDDKKIYVFGGCGVNGRLNDLWSFDVVDHTWVQYPLPGDNLKGRGGPGLTVSSL 868
            SYHS+ +D +++YVFGGCGV GRLNDLW+FDVV+  W+++P PG+  KGRGG GL V+  
Sbjct: 125  SYHSIAADQRRVYVFGGCGVAGRLNDLWAFDVVEKVWIKFPGPGEACKGRGGLGLAVA-- 182

Query: 869  NGKIWVVYGFAGQETDDVHCFDPVNGVWTQVDTSGDKPTPRSVFSTXXXXXXXXXXXXXX 1048
             GKIWVVYGF+G+ETDDVHCFD  +  W QVDT G+KP+PRSVFS+              
Sbjct: 183  EGKIWVVYGFSGEETDDVHCFDLAHEKWAQVDTKGEKPSPRSVFSSLVIGKYIFIYGGEV 242

Query: 1049 DPSDLGHLGAGKFAGDGYALDTETGVWRRFEDTSDDLADHPGPRGWCAYSSGCLNGKDGL 1228
            DPSD GHLGAGKF+G+ YALDT   VW+++ DT D   +HPGPRGWCA+S+G L+ K+GL
Sbjct: 243  DPSDQGHLGAGKFSGEVYALDTHNLVWKKWADTDD---NHPGPRGWCAFSAGRLHDKEGL 299

Query: 1229 LVYGGNSPSNDRLDDIFFFTPYFDGN 1306
            LVYGGNSPSNDRLDDIFF +P  D N
Sbjct: 300  LVYGGNSPSNDRLDDIFFLSPCLDVN 325


>ref|XP_003531506.1| PREDICTED: nitrile-specifier protein 5-like [Glycine max]
          Length = 328

 Score =  444 bits (1141), Expect = e-122
 Identities = 210/323 (65%), Positives = 242/323 (74%), Gaps = 3/323 (0%)
 Frame = +2

Query: 323  MAITGGKWAKLGQKKGTGPGARSSHAIAVVGHKAYIFGGEFSPRVPVDNNLHVYDLEAHT 502
            MA+  G W KL Q+ G G GARSSHAIA+V  K Y FGGEF PRVPVDN LHV+DLE  T
Sbjct: 1    MAVVHGSWVKLDQR-GEGQGARSSHAIAIVAQKVYAFGGEFVPRVPVDNKLHVFDLETLT 59

Query: 503  WAVADATGDIPPPRVGVTLAAVKDTIYSYGGRDSTHKELNEFYSFDTSTNKWTLLPS--- 673
            W+VADA+GD PPPRVGVT+A V +TIY +GGRD  HKELNE YSFDT  NKW L+ S   
Sbjct: 60   WSVADASGDAPPPRVGVTMAVVGETIYVFGGRDGEHKELNELYSFDTRANKWALISSGDI 119

Query: 674  GPANRSYHSMTSDDKKIYVFGGCGVNGRLNDLWSFDVVDHTWVQYPLPGDNLKGRGGPGL 853
            GP +RSYHSMT+DD+ +YVFGGCGV+GRLNDLW+FDVV++ WV++P PG+N KGRGGPGL
Sbjct: 120  GPPHRSYHSMTADDQHVYVFGGCGVHGRLNDLWAFDVVENKWVEFPSPGENCKGRGGPGL 179

Query: 854  TVSSLNGKIWVVYGFAGQETDDVHCFDPVNGVWTQVDTSGDKPTPRSVFSTXXXXXXXXX 1033
             V+   GKIWVVYGFAG E DDVHCFDP    W QV+TSG KPT RSVF +         
Sbjct: 180  VVA--RGKIWVVYGFAGMEMDDVHCFDPAQKTWAQVETSGQKPTARSVFCSFSDGKHIIV 237

Query: 1034 XXXXXDPSDLGHLGAGKFAGDGYALDTETGVWRRFEDTSDDLADHPGPRGWCAYSSGCLN 1213
                 DPSD GH+GAG+F+G+ YALD ET  W+R ED   D   HPGPRGWCA++     
Sbjct: 238  YGGEIDPSDQGHMGAGQFSGEVYALDMETLAWKRLED-KVDFGGHPGPRGWCAFARAWRG 296

Query: 1214 GKDGLLVYGGNSPSNDRLDDIFF 1282
            G +GLLVYGGNSPSNDRLDDIFF
Sbjct: 297  GHEGLLVYGGNSPSNDRLDDIFF 319


>ref|NP_566316.1| galactose oxidase/kelch repeat-containing protein [Arabidopsis
            thaliana] gi|6466955|gb|AAF13090.1|AC009176_17 unknown
            protein [Arabidopsis thaliana]
            gi|6648184|gb|AAF21182.1|AC013483_6 unknown protein
            [Arabidopsis thaliana]
            gi|11692832|gb|AAG40019.1|AF324668_1 MLP3.17 [Arabidopsis
            thaliana] gi|11993873|gb|AAG42920.1|AF329503_1 unknown
            protein [Arabidopsis thaliana] gi|14517448|gb|AAK62614.1|
            AT3g07720/F17A17_6 [Arabidopsis thaliana]
            gi|21280883|gb|AAM44920.1| unknown protein [Arabidopsis
            thaliana] gi|23507767|gb|AAN38687.1| At3g07720/F17A17_6
            [Arabidopsis thaliana] gi|332641071|gb|AEE74592.1|
            galactose oxidase/kelch repeat-containing protein
            [Arabidopsis thaliana]
          Length = 329

 Score =  443 bits (1140), Expect = e-122
 Identities = 207/321 (64%), Positives = 249/321 (77%), Gaps = 3/321 (0%)
 Frame = +2

Query: 338  GKWAKLGQKKGTGPGARSSHAIAVVGHKAYIFGGEFSPRVPVDNNLHVYDLEAHTWAVAD 517
            GKW +L QK GTGPGARSSHAIA+VG+K Y FGGEF PRVPVDN L+V+DLE  TW++ +
Sbjct: 8    GKWVQLKQK-GTGPGARSSHAIALVGNKMYAFGGEFQPRVPVDNQLYVFDLETQTWSIQE 66

Query: 518  ATGDIPPPRVGVTLAAVKDTIYSYGGRDSTHKELNEFYSFDTSTNKWTLLPS---GPANR 688
            A+GD PPPRVGV +AAV   IY +GGRDSTH+ELNE Y F+T TN+W LL S   GP NR
Sbjct: 67   ASGDAPPPRVGVAMAAVGPIIYFFGGRDSTHQELNELYCFNTLTNQWKLLSSGETGPQNR 126

Query: 689  SYHSMTSDDKKIYVFGGCGVNGRLNDLWSFDVVDHTWVQYPLPGDNLKGRGGPGLTVSSL 868
            SYHS+T+D + +YVFGGCGV+GRLNDLW+++VVD  W+++P PG+  +GRGGPGL V  +
Sbjct: 127  SYHSITADSQNVYVFGGCGVDGRLNDLWAYNVVDQKWIKFPSPGEACRGRGGPGLEV--V 184

Query: 869  NGKIWVVYGFAGQETDDVHCFDPVNGVWTQVDTSGDKPTPRSVFSTXXXXXXXXXXXXXX 1048
             GKIWVVYGFAG+E DDVHCFD   G W +V+T G+KP+ RSVFST              
Sbjct: 185  QGKIWVVYGFAGEEADDVHCFDIAKGEWKEVETKGEKPSARSVFSTAVVGKQILISGGEI 244

Query: 1049 DPSDLGHLGAGKFAGDGYALDTETGVWRRFEDTSDDLADHPGPRGWCAYSSGCLNGKDGL 1228
            DPSDLGH+GAG F GD Y LDTET  WR++ED    + +HPGPRGWCA+++G  +GK GL
Sbjct: 245  DPSDLGHMGAGCFTGDAYGLDTETLEWRKWEDGVGSV-EHPGPRGWCAFAAGSRDGKQGL 303

Query: 1229 LVYGGNSPSNDRLDDIFFFTP 1291
            LVYGGNSPSNDRLDDIFFFTP
Sbjct: 304  LVYGGNSPSNDRLDDIFFFTP 324


Top