BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001645
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis p...   324   9e-87
ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis p...   324   1e-86
gb|AFK43440.1| unknown [Medicago truncatula]                          313   3e-83
ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis p...   310   2e-82
ref|XP_003549654.1| PREDICTED: 60S ribosome subunit biogenesis p...   310   2e-82

>ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera] gi|147783622|emb|CAN68143.1|
           hypothetical protein VITISV_035660 [Vitis vinifera]
          Length = 187

 Score =  324 bits (831), Expect = 9e-87
 Identities = 159/190 (83%), Positives = 171/190 (90%)
 Frame = +3

Query: 27  MRALDETETSVVFEKLFKFTGNNLKNIVEKPSLEGPQQDGNIQGRYCFRLQKNKVFYVSE 206
           MR LDE ET+ VFEKLFKFTGNNLKNIVE PS EGP  +    GRYCFRLQKN+V+YVSE
Sbjct: 1   MRPLDENETTAVFEKLFKFTGNNLKNIVENPSHEGPDPN---PGRYCFRLQKNRVYYVSE 57

Query: 207 SLVKRATNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWLKPSSEMSFLY 386
           SLVKRATNI R +L+SLGTCIGKFTKGGKFHLT+Q +NLLA NAKHKVWLKP+SEMSFLY
Sbjct: 58  SLVKRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLY 117

Query: 387 GNHVLKGGLGRITENTSTGDGVVVFSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADT 566
           GNHVLKGGLGRITEN   GDG+VVFSMSDVPLGFG+AAKSTQDCRKLDPNGIVVLHQAD 
Sbjct: 118 GNHVLKGGLGRITENIVAGDGIVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADI 177

Query: 567 GEYLRMEDDL 596
           GEYLRMED+L
Sbjct: 178 GEYLRMEDEL 187


>ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera]
          Length = 187

 Score =  324 bits (830), Expect = 1e-86
 Identities = 158/190 (83%), Positives = 171/190 (90%)
 Frame = +3

Query: 27  MRALDETETSVVFEKLFKFTGNNLKNIVEKPSLEGPQQDGNIQGRYCFRLQKNKVFYVSE 206
           MR LDE ET+ VFEKLFKFTGNNLKNIVE PS EGP  +    GRYCFRLQKN+V+YVSE
Sbjct: 1   MRPLDENETTAVFEKLFKFTGNNLKNIVENPSYEGPDPNA---GRYCFRLQKNRVYYVSE 57

Query: 207 SLVKRATNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWLKPSSEMSFLY 386
           S+VKRATNI R +L+SLGTCIGKFTKGGKFHLT+Q +NLLA NAKHKVWLKP+SEMSFLY
Sbjct: 58  SMVKRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLY 117

Query: 387 GNHVLKGGLGRITENTSTGDGVVVFSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADT 566
           GNHVLKGGLGRITEN   GDGVVVFSMSDVPLGFG+AAKSTQDCRKLDPNGIVVLHQ+D 
Sbjct: 118 GNHVLKGGLGRITENIVAGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDI 177

Query: 567 GEYLRMEDDL 596
           GEYLRMED+L
Sbjct: 178 GEYLRMEDEL 187


>gb|AFK43440.1| unknown [Medicago truncatula]
          Length = 187

 Score =  313 bits (801), Expect = 3e-83
 Identities = 154/190 (81%), Positives = 165/190 (86%)
 Frame = +3

Query: 27  MRALDETETSVVFEKLFKFTGNNLKNIVEKPSLEGPQQDGNIQGRYCFRLQKNKVFYVSE 206
           MR LDETETSVVFEKLFKF GNNLKN+VE PS EGP  +    GRYCFRL KNK++Y SE
Sbjct: 1   MRPLDETETSVVFEKLFKFVGNNLKNLVENPSHEGPDSN---PGRYCFRLNKNKIYYCSE 57

Query: 207 SLVKRATNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWLKPSSEMSFLY 386
           SLVKRATNI+R  L+SLGTCIGK+T GG FHLT+Q LNLLA NAKHKVWLKP SEMSFLY
Sbjct: 58  SLVKRATNIARPNLVSLGTCIGKYTHGGNFHLTVQALNLLAANAKHKVWLKPQSEMSFLY 117

Query: 387 GNHVLKGGLGRITENTSTGDGVVVFSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADT 566
           GNHVLK  LGRITEN  +GDGVVVFSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQ D 
Sbjct: 118 GNHVLKSALGRITENIVSGDGVVVFSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQGDI 177

Query: 567 GEYLRMEDDL 596
           GEYLR+ED+L
Sbjct: 178 GEYLRIEDEL 187


>ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  310 bits (794), Expect = 2e-82
 Identities = 152/190 (80%), Positives = 167/190 (87%)
 Frame = +3

Query: 27  MRALDETETSVVFEKLFKFTGNNLKNIVEKPSLEGPQQDGNIQGRYCFRLQKNKVFYVSE 206
           MR LDE ET+VVFEKL KFTGNNLKNIVE PS EG + +    GRYCFRL KNKV+YVS+
Sbjct: 1   MRPLDEQETTVVFEKLHKFTGNNLKNIVENPSHEGTEPN---PGRYCFRLHKNKVYYVSD 57

Query: 207 SLVKRATNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWLKPSSEMSFLY 386
           SLVKRATN++R  L+SLGTCIGKFT GG FHLT+Q L LL+ NAKHKVWLKP+SEMSFLY
Sbjct: 58  SLVKRATNVARSNLVSLGTCIGKFTHGGSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLY 117

Query: 387 GNHVLKGGLGRITENTSTGDGVVVFSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADT 566
           GNHVLKGGLGRITEN   GDGVVV+SMSDVPLGFG+AAKSTQDCRKLDPNGIVVLHQ+D 
Sbjct: 118 GNHVLKGGLGRITENIVPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDI 177

Query: 567 GEYLRMEDDL 596
           GEYLRMED+L
Sbjct: 178 GEYLRMEDEL 187


>ref|XP_003549654.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Glycine max]
          Length = 187

 Score =  310 bits (794), Expect = 2e-82
 Identities = 151/190 (79%), Positives = 164/190 (86%)
 Frame = +3

Query: 27  MRALDETETSVVFEKLFKFTGNNLKNIVEKPSLEGPQQDGNIQGRYCFRLQKNKVFYVSE 206
           MR LDE ETS VFEKLFKF GNNLKNIVE PS EGP  +    GRYCFRL KNK+FY SE
Sbjct: 1   MRPLDEKETSAVFEKLFKFVGNNLKNIVENPSHEGPDSN---PGRYCFRLHKNKIFYASE 57

Query: 207 SLVKRATNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWLKPSSEMSFLY 386
           SLVKRATN++R  L+SLGTCIGK+T GG FHLT+Q LNLLA NAKHKVWLKP SEMSFLY
Sbjct: 58  SLVKRATNVARPNLVSLGTCIGKYTHGGSFHLTVQALNLLAANAKHKVWLKPQSEMSFLY 117

Query: 387 GNHVLKGGLGRITENTSTGDGVVVFSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQADT 566
           GNHVLKG LG+++EN + GDGVVVFSM+DVPLGFGVAAKST DCRKLDPNGIVVLHQAD 
Sbjct: 118 GNHVLKGALGKLSENIAAGDGVVVFSMADVPLGFGVAAKSTLDCRKLDPNGIVVLHQADV 177

Query: 567 GEYLRMEDDL 596
           GEYLRMED+L
Sbjct: 178 GEYLRMEDEL 187