BLASTX nr result

ID: Coptis23_contig00001627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001627
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281575.1| PREDICTED: protein IN2-1 homolog B-like [Vit...   353   4e-95
emb|CBI25324.3| unnamed protein product [Vitis vinifera]              349   7e-94
ref|XP_003632205.1| PREDICTED: protein IN2-1 homolog B-like [Vit...   343   5e-92
ref|XP_002312053.1| predicted protein [Populus trichocarpa] gi|2...   341   2e-91
emb|CBI16230.3| unnamed protein product [Vitis vinifera]              340   3e-91

>ref|XP_002281575.1| PREDICTED: protein IN2-1 homolog B-like [Vitis vinifera]
          Length = 303

 Score =  353 bits (907), Expect = 4e-95
 Identities = 170/239 (71%), Positives = 200/239 (83%), Gaps = 2/239 (0%)
 Frame = -2

Query: 1048 TQSSAMTTGIVPEILPPVLTSASDPPPLFDGTTRLYISYICPYAQRPWITRNCKGLQEKI 869
            T S+AM TG V E+LPP L S S+PPPLFDGTTRLYISY CPYAQR WITRNCKGLQEKI
Sbjct: 62   TISAAMATGSVREVLPPALDSTSEPPPLFDGTTRLYISYTCPYAQRVWITRNCKGLQEKI 121

Query: 868  KLVAIDLNDRPAWYKEKLYPANKVPALEHNNEVKGESLDLIKYLDSEFEGPSLFPDDPLK 689
            KLV IDL +RPAWYKEK+YPANKVP+LEHNNEVKGESLDLIKY+DS FEGPSLFPDDP K
Sbjct: 122  KLVPIDLQNRPAWYKEKVYPANKVPSLEHNNEVKGESLDLIKYIDSNFEGPSLFPDDPAK 181

Query: 688  REFAEELFSSTDAFSRDVIAAVKGNG--DVGTPFDHLENALSKFDDGPFFLGQFSLVDIA 515
            REFAEEL + TD+FS+ V+  +KG+G  + G  FD++E ALSKF+DGPFFLGQFSLVDIA
Sbjct: 182  REFAEELLAYTDSFSKAVMTLLKGDGVDEAGAAFDYIEMALSKFEDGPFFLGQFSLVDIA 241

Query: 514  YAPFVQRYYPLVLDVKEYDATTGRPKLTSWIKELNKIEAYTQTLQDPQVLVGALKKIFS 338
            YAPFV+R+ P + +VK+YDA  GRPKL +W +EL+K E + QT ++P+ LV A KK F+
Sbjct: 242  YAPFVERFVPFLREVKKYDAMAGRPKLEAWFEELSKNEGFQQTRREPKELVEAYKKRFA 300


>emb|CBI25324.3| unnamed protein product [Vitis vinifera]
          Length = 237

 Score =  349 bits (896), Expect = 7e-94
 Identities = 167/234 (71%), Positives = 196/234 (83%), Gaps = 2/234 (0%)
 Frame = -2

Query: 1033 MTTGIVPEILPPVLTSASDPPPLFDGTTRLYISYICPYAQRPWITRNCKGLQEKIKLVAI 854
            M TG V E+LPP L S S+PPPLFDGTTRLYISY CPYAQR WITRNCKGLQEKIKLV I
Sbjct: 1    MATGSVREVLPPALDSTSEPPPLFDGTTRLYISYTCPYAQRVWITRNCKGLQEKIKLVPI 60

Query: 853  DLNDRPAWYKEKLYPANKVPALEHNNEVKGESLDLIKYLDSEFEGPSLFPDDPLKREFAE 674
            DL +RPAWYKEK+YPANKVP+LEHNNEVKGESLDLIKY+DS FEGPSLFPDDP KREFAE
Sbjct: 61   DLQNRPAWYKEKVYPANKVPSLEHNNEVKGESLDLIKYIDSNFEGPSLFPDDPAKREFAE 120

Query: 673  ELFSSTDAFSRDVIAAVKGNG--DVGTPFDHLENALSKFDDGPFFLGQFSLVDIAYAPFV 500
            EL + TD+FS+ V+  +KG+G  + G  FD++E ALSKF+DGPFFLGQFSLVDIAYAPFV
Sbjct: 121  ELLAYTDSFSKAVMTLLKGDGVDEAGAAFDYIEMALSKFEDGPFFLGQFSLVDIAYAPFV 180

Query: 499  QRYYPLVLDVKEYDATTGRPKLTSWIKELNKIEAYTQTLQDPQVLVGALKKIFS 338
            +R+ P + +VK+YDA  GRPKL +W +EL+K E + QT ++P+ LV A KK F+
Sbjct: 181  ERFVPFLREVKKYDAMAGRPKLEAWFEELSKNEGFQQTRREPKELVEAYKKRFA 234


>ref|XP_003632205.1| PREDICTED: protein IN2-1 homolog B-like [Vitis vinifera]
          Length = 286

 Score =  343 bits (880), Expect = 5e-92
 Identities = 167/245 (68%), Positives = 199/245 (81%), Gaps = 2/245 (0%)
 Frame = -2

Query: 1060 KKTITQSSAMTTGIVPEILPPVLTSASDPPPLFDGTTRLYISYICPYAQRPWITRNCKGL 881
            K  I+  ++M      E+LPP L S S+PPPLFDGTTRLY SYICPYAQR WI RN KGL
Sbjct: 42   KGNISPLASMAVTSAEEVLPPSLDSTSEPPPLFDGTTRLYTSYICPYAQRVWIARNYKGL 101

Query: 880  QEKIKLVAIDLNDRPAWYKEKLYPANKVPALEHNNEVKGESLDLIKYLDSEFEGPSLFPD 701
            Q+KIKLV IDL +RPAWYKEK+YP NKVP+LEHNN+V GESLDLIKY+DS FEGPSL+PD
Sbjct: 102  QDKIKLVPIDLGNRPAWYKEKVYPENKVPSLEHNNKVTGESLDLIKYIDSHFEGPSLYPD 161

Query: 700  DPLKREFAEELFSSTDAFSRDVIAAVKGN--GDVGTPFDHLENALSKFDDGPFFLGQFSL 527
            DP KR+FAEEL S T  F+R VI ++KG+   ++   FD+LE ALSKF+DGPFFLGQFSL
Sbjct: 162  DPNKRQFAEELLSYTYTFNRAVIFSLKGDSQNEINAAFDYLETALSKFNDGPFFLGQFSL 221

Query: 526  VDIAYAPFVQRYYPLVLDVKEYDATTGRPKLTSWIKELNKIEAYTQTLQDPQVLVGALKK 347
            VDIA+APF++R++PL+LDVK+ D T+GRPKL SWI+E+NKIEAY QT +DPQ LV ALKK
Sbjct: 222  VDIAFAPFIERFHPLLLDVKKCDITSGRPKLVSWIEEMNKIEAYKQTKRDPQELVDALKK 281

Query: 346  IFSFN 332
             F  N
Sbjct: 282  RFMAN 286


>ref|XP_002312053.1| predicted protein [Populus trichocarpa] gi|222851873|gb|EEE89420.1|
            predicted protein [Populus trichocarpa]
          Length = 238

 Score =  341 bits (875), Expect = 2e-91
 Identities = 161/224 (71%), Positives = 188/224 (83%), Gaps = 1/224 (0%)
 Frame = -2

Query: 1009 ILPPVLTSASDPPPLFDGTTRLYISYICPYAQRPWITRNCKGLQEKIKLVAIDLNDRPAW 830
            +LPPVLTS S+PPP+FDGTTRLYISY CPYAQR WITRNCKGLQ+KIKLV IDL DRPAW
Sbjct: 1    VLPPVLTSNSEPPPVFDGTTRLYISYTCPYAQRVWITRNCKGLQDKIKLVPIDLQDRPAW 60

Query: 829  YKEKLYPANKVPALEHNNEVKGESLDLIKYLDSEFEGPSLFPDDPLKREFAEELFSSTDA 650
            YKEK+YP NKVP+LEHNNEVKGESLDLIKY+DS F+GPSLFPDDP K+EFAE+LFS T +
Sbjct: 61   YKEKVYPPNKVPSLEHNNEVKGESLDLIKYIDSHFDGPSLFPDDPAKKEFAEDLFSYTGS 120

Query: 649  FSRDVIAAVKGNGD-VGTPFDHLENALSKFDDGPFFLGQFSLVDIAYAPFVQRYYPLVLD 473
            FS+   +  KG  D  G  FD++E ALSKFDDGPFFLGQFSLVDIAYAPF++R+ P +L+
Sbjct: 121  FSKANNSTFKGEADEAGAAFDYIETALSKFDDGPFFLGQFSLVDIAYAPFIERFQPALLE 180

Query: 472  VKEYDATTGRPKLTSWIKELNKIEAYTQTLQDPQVLVGALKKIF 341
             K+YD T GRPKL +WI+E+NKIEAY QT ++P+  V   KK F
Sbjct: 181  FKKYDITAGRPKLAAWIEEMNKIEAYNQTRREPKQHVETYKKRF 224


>emb|CBI16230.3| unnamed protein product [Vitis vinifera]
          Length = 235

 Score =  340 bits (873), Expect = 3e-91
 Identities = 164/229 (71%), Positives = 193/229 (84%), Gaps = 2/229 (0%)
 Frame = -2

Query: 1012 EILPPVLTSASDPPPLFDGTTRLYISYICPYAQRPWITRNCKGLQEKIKLVAIDLNDRPA 833
            E+LPP L S S+PPPLFDGTTRLY SYICPYAQR WI RN KGLQ+KIKLV IDL +RPA
Sbjct: 7    EVLPPSLDSTSEPPPLFDGTTRLYTSYICPYAQRVWIARNYKGLQDKIKLVPIDLGNRPA 66

Query: 832  WYKEKLYPANKVPALEHNNEVKGESLDLIKYLDSEFEGPSLFPDDPLKREFAEELFSSTD 653
            WYKEK+YP NKVP+LEHNN+V GESLDLIKY+DS FEGPSL+PDDP KR+FAEEL S T 
Sbjct: 67   WYKEKVYPENKVPSLEHNNKVTGESLDLIKYIDSHFEGPSLYPDDPNKRQFAEELLSYTY 126

Query: 652  AFSRDVIAAVKGN--GDVGTPFDHLENALSKFDDGPFFLGQFSLVDIAYAPFVQRYYPLV 479
             F+R VI ++KG+   ++   FD+LE ALSKF+DGPFFLGQFSLVDIA+APF++R++PL+
Sbjct: 127  TFNRAVIFSLKGDSQNEINAAFDYLETALSKFNDGPFFLGQFSLVDIAFAPFIERFHPLL 186

Query: 478  LDVKEYDATTGRPKLTSWIKELNKIEAYTQTLQDPQVLVGALKKIFSFN 332
            LDVK+ D T+GRPKL SWI+E+NKIEAY QT +DPQ LV ALKK F  N
Sbjct: 187  LDVKKCDITSGRPKLVSWIEEMNKIEAYKQTKRDPQELVDALKKRFMAN 235


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