BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001613
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264233.2| PREDICTED: photosystem I reaction center sub...   172   1e-40
emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera]   171   2e-40
gb|AFW90564.1| photosystem I reaction center V (chloroplast) [So...   170   6e-40
gb|AFW90624.1| photosystem I reaction center V (chloroplast) [So...   168   2e-39
gb|AFS88925.1| chloroplast photosystem I reaction center subunit...   165   1e-38

>ref|XP_002264233.2| PREDICTED: photosystem I reaction center subunit V, chloroplastic
           [Vitis vinifera] gi|296090036|emb|CBI39855.3| unnamed
           protein product [Vitis vinifera]
          Length = 194

 Score =  172 bits (435), Expect = 1e-40
 Identities = 96/146 (65%), Positives = 105/146 (71%)
 Frame = +1

Query: 151 SATGLLSTPTTAFANNNKQTYNHLQHHCGFQGLRPLNKPTDTSFANTXXXXXXXXXXXXL 330
           +++   S PT + A    Q   HL H   FQGLRPL+KPTD S                 
Sbjct: 35  ASSAFFSAPTFSSAATTLQ--KHLPHQ-SFQGLRPLSKPTDLSLTIPRMSTRPIP----- 86

Query: 331 ERKQRRGGVRAELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGVTHFEAGDT 510
             K+  G VRAELN SLVISLSTGLSLFLGRFVFFNFQRENVAKQVP+QNG+THFEAGD+
Sbjct: 87  --KRSAGVVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDS 144

Query: 511 RAKEYVSLLKSNDPVGFNIVDVLAWG 588
           RAKEYVSLLKSNDPVGFNIVDVLAWG
Sbjct: 145 RAKEYVSLLKSNDPVGFNIVDVLAWG 170


>emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera]
          Length = 161

 Score =  171 bits (433), Expect = 2e-40
 Identities = 96/146 (65%), Positives = 105/146 (71%)
 Frame = +1

Query: 151 SATGLLSTPTTAFANNNKQTYNHLQHHCGFQGLRPLNKPTDTSFANTXXXXXXXXXXXXL 330
           +++   S PT + A    Q   HL H   FQGLRPL+KPTD S                 
Sbjct: 2   ASSAFFSAPTFSSAATTLQ--KHLPHQY-FQGLRPLSKPTDLSLTIPRMSTRPIP----- 53

Query: 331 ERKQRRGGVRAELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGVTHFEAGDT 510
             K+  G VRAELN SLVISLSTGLSLFLGRFVFFNFQRENVAKQVP+QNG+THFEAGD+
Sbjct: 54  --KRSAGVVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDS 111

Query: 511 RAKEYVSLLKSNDPVGFNIVDVLAWG 588
           RAKEYVSLLKSNDPVGFNIVDVLAWG
Sbjct: 112 RAKEYVSLLKSNDPVGFNIVDVLAWG 137


>gb|AFW90564.1| photosystem I reaction center V (chloroplast) [Solanum tuberosum]
          Length = 146

 Score =  170 bits (430), Expect = 6e-40
 Identities = 88/118 (74%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
 Frame = +1

Query: 238 FQGLRPLNKPTDTS-FANTXXXXXXXXXXXXLERKQRRGGVRAELNPSLVISLSTGLSLF 414
           FQGLRPLNKPTD+S F N             + +K R   V+AELNPS+VISLSTGLSLF
Sbjct: 11  FQGLRPLNKPTDSSLFLNKPIAFKP------ITKKTRNLAVKAELNPSIVISLSTGLSLF 64

Query: 415 LGRFVFFNFQRENVAKQVPEQNGVTHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWG 588
           LGRFVFFNFQRENVAKQVP QNG++HFEAGD RAKEY+SLLKSNDPVGFNIVDVLAWG
Sbjct: 65  LGRFVFFNFQRENVAKQVPSQNGISHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWG 122


>gb|AFW90624.1| photosystem I reaction center V (chloroplast) [Solanum tuberosum]
          Length = 146

 Score =  168 bits (425), Expect = 2e-39
 Identities = 87/118 (73%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
 Frame = +1

Query: 238 FQGLRPLNKPTDTS-FANTXXXXXXXXXXXXLERKQRRGGVRAELNPSLVISLSTGLSLF 414
           FQGLRPLNKPTD+S F N             + +K R   V+AELNPS+VISLSTGLSLF
Sbjct: 11  FQGLRPLNKPTDSSLFLNKPIAFKP------ITKKTRNLAVKAELNPSIVISLSTGLSLF 64

Query: 415 LGRFVFFNFQRENVAKQVPEQNGVTHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWG 588
           LGRFVFFNFQRENVAKQVP Q+G++HFEAGD RAKEY+SLLKSNDPVGFNIVDVLAWG
Sbjct: 65  LGRFVFFNFQRENVAKQVPSQDGISHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWG 122


>gb|AFS88925.1| chloroplast photosystem I reaction center subunit V-2 [Musa AB
           Group] gi|421958217|gb|AFX72947.1| photosystem I
           reaction center subunit V-2 [Musa AB Group]
          Length = 160

 Score =  165 bits (418), Expect = 1e-38
 Identities = 91/119 (76%), Positives = 98/119 (82%), Gaps = 2/119 (1%)
 Frame = +1

Query: 238 FQGLRPLNKPTDTS-FANTXXXXXXXXXXXXLERKQRRGGVRAELNPSLVISLSTGLSLF 414
           F+GLRPL KPTD+S F  T            + R ++ GG+RAELNPSLVISLSTGLSLF
Sbjct: 24  FRGLRPL-KPTDSSQFPQTRAISIKP-----VRRVRKPGGIRAELNPSLVISLSTGLSLF 77

Query: 415 LGRFVFFNFQRENVAKQ-VPEQNGVTHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWG 588
           LGRFVFFNFQRENVAKQ +PEQNGVTHFEAGDTRAKEYV LLKSNDPVGFNIVDVLAWG
Sbjct: 78  LGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDTRAKEYVGLLKSNDPVGFNIVDVLAWG 136