BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001611
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|2...   194   5e-48
ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256...   193   1e-47
gb|AFK36652.1| unknown [Lotus japonicus]                              186   2e-45
ref|XP_002523537.1| structural constituent of ribosome, putative...   184   5e-45
gb|ADR71238.1| 30S ribosomal protein S6B [Hevea brasiliensis]         184   9e-45

>ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|222866591|gb|EEF03722.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  194 bits (494), Expect = 5e-48
 Identities = 93/136 (68%), Positives = 114/136 (83%), Gaps = 4/136 (2%)
 Frame = +2

Query: 26  MPLYDCMLLLKPHVSRELIMDLAARIGKHVHMRNGVVTNIKSFDKVYLGYGIKKLDGRFF 205
           MPLYDCML+LKPHV +E +MDL AR+GKHV+ RNGVVT+IKSF  V LGYGIKKLDGR +
Sbjct: 1   MPLYDCMLMLKPHVRKEALMDLVARVGKHVYSRNGVVTDIKSFGTVQLGYGIKKLDGRHY 60

Query: 206 KGQLVQMTMMATPNINKELHYLNKEDRLLRWLLVKHRNTQYGADMMNED--AGKFDFTNF 379
           +GQL+Q+TMMATPNINKELHYLNKEDRLLRWLLVKHR+ ++G + M+ED   G+FDF+ F
Sbjct: 61  QGQLMQITMMATPNINKELHYLNKEDRLLRWLLVKHRDIKFGLEFMDEDDEDGEFDFSEF 120

Query: 380 SGRNLYDGD--DDIDD 421
              +++D D  DD +D
Sbjct: 121 PRDSIFDNDNSDDYED 136


>ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256785 [Vitis vinifera]
          Length = 162

 Score =  193 bits (491), Expect = 1e-47
 Identities = 92/137 (67%), Positives = 111/137 (81%), Gaps = 5/137 (3%)
 Frame = +2

Query: 26  MPLYDCMLLLKPHVSRELIMDLAARIGKHVHMRNGVVTNIKSFDKVYLGYGIKKLDGRFF 205
           MP YDCMLLLKPHV++E +MDL AR+GKHV+ RNGV+T+IKSF  V LGYGIKKLDGR++
Sbjct: 1   MPFYDCMLLLKPHVNKESLMDLVARVGKHVYRRNGVLTDIKSFGIVRLGYGIKKLDGRYY 60

Query: 206 KGQLVQMTMMATPNINKELHYLNKEDRLLRWLLVKHRNTQYGADMMNEDAGKFDFTNFSG 385
           +GQL+QM+MMATPN NKELHYLNKEDRLLRWLLVKHRNT+YG + +NED  + + + F  
Sbjct: 61  QGQLMQMSMMATPNFNKELHYLNKEDRLLRWLLVKHRNTKYGLEFLNEDDVRSELSKFPR 120

Query: 386 RNLYDG-----DDDIDD 421
             L+D      DDD DD
Sbjct: 121 STLFDDENIDEDDDDDD 137


>gb|AFK36652.1| unknown [Lotus japonicus]
          Length = 149

 Score =  186 bits (472), Expect = 2e-45
 Identities = 85/132 (64%), Positives = 107/132 (81%)
 Frame = +2

Query: 26  MPLYDCMLLLKPHVSRELIMDLAARIGKHVHMRNGVVTNIKSFDKVYLGYGIKKLDGRFF 205
           MP YDCMLL KPHV +E ++DL  R+GKHV+ RNGVVT+IKS+  ++LGYGIKKLDGRF+
Sbjct: 1   MPPYDCMLLFKPHVEKEALIDLVTRVGKHVYRRNGVVTDIKSYGMIHLGYGIKKLDGRFY 60

Query: 206 KGQLVQMTMMATPNINKELHYLNKEDRLLRWLLVKHRNTQYGADMMNEDAGKFDFTNFSG 385
           +GQ++Q++MMATP INKELHYLNKEDRLLRWLLVKHRNT +G D + E+ G+ + + FS 
Sbjct: 61  QGQMMQLSMMATPQINKELHYLNKEDRLLRWLLVKHRNTSFGLDFLAEEGGQ-ELSKFSE 119

Query: 386 RNLYDGDDDIDD 421
               DG D+ DD
Sbjct: 120 MRTLDGGDEDDD 131


>ref|XP_002523537.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223537244|gb|EEF38876.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 162

 Score =  184 bits (468), Expect = 5e-45
 Identities = 87/137 (63%), Positives = 108/137 (78%), Gaps = 5/137 (3%)
 Frame = +2

Query: 26  MPLYDCMLLLKPHVSRELIMDLAARIGKHVHMRNGVVTNIKSFDKVYLGYGIKKLDGRFF 205
           MPLYDCMLLLKPH+ +E ++DL AR+GKHV  RNGV+T++KSF  + LGYGIKK + R+F
Sbjct: 1   MPLYDCMLLLKPHIHKEAVIDLVARVGKHVQSRNGVLTDMKSFGTIQLGYGIKKRENRYF 60

Query: 206 KGQLVQMTMMATPNINKELHYLNKEDRLLRWLLVKHRNTQYGADMMNEDAGKFDFTNFSG 385
           +GQL+QMTMMATPNINKELHYLNKEDRLLRWLLVKHR+T+YG D M+E+ GK +    S 
Sbjct: 61  QGQLMQMTMMATPNINKELHYLNKEDRLLRWLLVKHRDTKYGLDFMDENDGKGELNKLSP 120

Query: 386 RNLY-----DGDDDIDD 421
              +     D D+D D+
Sbjct: 121 SKYWVDIAGDKDEDEDE 137


>gb|ADR71238.1| 30S ribosomal protein S6B [Hevea brasiliensis]
          Length = 163

 Score =  184 bits (466), Expect = 9e-45
 Identities = 90/139 (64%), Positives = 107/139 (76%), Gaps = 7/139 (5%)
 Frame = +2

Query: 26  MPLYDCMLLLKPHVSRELIMDLAARIGKHVHMRNGVVTNIKSFDKVYLGYGIKKLDGRFF 205
           MPLYDCMLLLKPHV +E +MDL AR+GKHV+ RNGV+T+IKSF  + LGYGIKKLDGR++
Sbjct: 1   MPLYDCMLLLKPHVRKEALMDLVARVGKHVYARNGVLTDIKSFGTIQLGYGIKKLDGRYY 60

Query: 206 KGQLVQMTMMATPNINKELHYLNKEDRLLRWLLVKHRNTQYGADMMNEDAGKFD------ 367
           +GQL+QMTMMATPNINKELHYLNKEDRLLRWLLVKHR+T  G + + ED  K +      
Sbjct: 61  QGQLMQMTMMATPNINKELHYLNKEDRLLRWLLVKHRDTTDGLEFLEEDNDKEELDLSEI 120

Query: 368 -FTNFSGRNLYDGDDDIDD 421
             +N       + DDD DD
Sbjct: 121 LLSNEEEEEEEEDDDDDDD 139