BLASTX nr result

ID: Coptis23_contig00001601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001601
         (1745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324864.1| predicted protein [Populus trichocarpa] gi|2...   571   e-160
ref|XP_002285168.1| PREDICTED: putative clathrin assembly protei...   568   e-159
ref|XP_003522610.1| PREDICTED: putative clathrin assembly protei...   560   e-157
ref|XP_002515505.1| clathrin assembly protein, putative [Ricinus...   556   e-156
ref|XP_003526396.1| PREDICTED: putative clathrin assembly protei...   555   e-155

>ref|XP_002324864.1| predicted protein [Populus trichocarpa] gi|222866298|gb|EEF03429.1|
            predicted protein [Populus trichocarpa]
          Length = 671

 Score =  571 bits (1471), Expect = e-160
 Identities = 299/449 (66%), Positives = 334/449 (74%), Gaps = 3/449 (0%)
 Frame = +1

Query: 82   PPRSRSYGDVIXXXXXXXXXXXXXXXPVTPLREMKMESVLGRMSQFQRLLDRFLSCRPTG 261
            P R+RSYGD+                  TPLREMK E + G+M   QRLLDRFLSCRPTG
Sbjct: 227  PRRTRSYGDM---SEMGGGEGREEKKTATPLREMKPERIFGKMGHLQRLLDRFLSCRPTG 283

Query: 262  LAKNSRMVMIALYQLVKESFQLYADICEILAVLLDQFFEMEYSDCVKAFEAYTSSAKQID 441
            LAKN+RM++IALY +VKESFQLYADICE+LAVLLD+FF+MEY DCVKAF+AY S+AKQID
Sbjct: 284  LAKNNRMILIALYPVVKESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQID 343

Query: 442  ELVGFYNWCKDTGVARSSEFPEVQRISDKLLETLEEFVRDRSKRTKSPERKXXXXXXXXX 621
            EL+ FYNWCKDTGVARSSE+PEVQRI+ KLLETLEEFVRDR+KR KSPERK         
Sbjct: 344  ELIAFYNWCKDTGVARSSEYPEVQRITGKLLETLEEFVRDRAKRPKSPERKEEAPPVPQE 403

Query: 622  XXXXXXXQDMNEIKALXXXXXXXXXXXXXXXXXXQVKQETGDLLNLADDAVSAEDQSNRL 801
                    DMNEIKAL                  Q  Q T DL+NL DDAV+A+DQ NRL
Sbjct: 404  EEPVP---DMNEIKALPAPEDFTPPPPPETEPRPQKPQVTEDLVNLRDDAVTADDQGNRL 460

Query: 802  ALALFSKPAASGTNGSWEAFPSNGESEVTSAWQTPAAETGKADWELALVESASNLSKQKA 981
            ALALF+ PAA+  NGSWEAF SNGE +VTSAWQTPAAE GKADWELALVE+ASNLSKQKA
Sbjct: 461  ALALFAGPAANSGNGSWEAFQSNGEPQVTSAWQTPAAEAGKADWELALVETASNLSKQKA 520

Query: 982  AMGGGLDPLLLNGMYDQGTVRQHASTSQLTGGSASSVAILGPGKTSTPVLALPAPDGTIQ 1161
             +GGG DPLLLNGMYDQG VRQH  T+QL+GGSASSVA+ GPG  +TPVLALPAPDGT+Q
Sbjct: 521  TLGGGFDPLLLNGMYDQGMVRQHVGTAQLSGGSASSVALPGPGNGTTPVLALPAPDGTVQ 580

Query: 1162 AVGQDPFAASLTIPPPSYVQMAEIXXXXXXXXXXXXXXXXYAREGMQGQVSLAKI-GGGT 1338
            AV QDPFAASL +PPPSYVQMA++                YAR+GMQGQ SLAKI GGG 
Sbjct: 581  AVNQDPFAASLCVPPPSYVQMADMEKKQQLLVQEQVTWQQYARDGMQGQTSLAKISGGGY 640

Query: 1339 YAPGQPVMMPYGMPPVNGMG--PSGYYYT 1419
            Y  G    MPYGMPPVNGMG  P+GYYYT
Sbjct: 641  YNAGPMPTMPYGMPPVNGMGPPPAGYYYT 669


>ref|XP_002285168.1| PREDICTED: putative clathrin assembly protein At2g25430-like [Vitis
            vinifera]
          Length = 652

 Score =  568 bits (1464), Expect = e-159
 Identities = 296/446 (66%), Positives = 332/446 (74%), Gaps = 3/446 (0%)
 Frame = +1

Query: 88   RSRSYGDVIXXXXXXXXXXXXXXXPVTPLREMKMESVLGRMSQFQRLLDRFLSCRPTGLA 267
            RSRSYGDV                 VTPLREMK E + G+M   QRLLDRFL+CRPTGLA
Sbjct: 206  RSRSYGDVGESSGRGGRDGQEGKRAVTPLREMKPERIFGKMGHLQRLLDRFLACRPTGLA 265

Query: 268  KNSRMVMIALYQLVKESFQLYADICEILAVLLDQFFEMEYSDCVKAFEAYTSSAKQIDEL 447
            KN+RMV+IALY +V+ESFQLYADICE+LAVLLD+FFEMEY DCVKAF+AY S+AKQIDEL
Sbjct: 266  KNNRMVLIALYPVVRESFQLYADICEVLAVLLDRFFEMEYPDCVKAFDAYASTAKQIDEL 325

Query: 448  VGFYNWCKDTGVARSSEFPEVQRISDKLLETLEEFVRDRSKRTKSPERKXXXXXXXXXXX 627
            V FYNWCKDTGVARSSE+PEVQRI+DKLLETLEEFVRDR+K  KSPER            
Sbjct: 326  VAFYNWCKDTGVARSSEYPEVQRITDKLLETLEEFVRDRAKGPKSPERNEEPQPVAREEE 385

Query: 628  XXXXXQDMNEIKALXXXXXXXXXXXXXXXXXX--QVKQETGDLLNLADDAVSAEDQSNRL 801
                  DMNEIKAL                    Q  Q T DL+NL D+ V+A+DQ NR 
Sbjct: 386  PVP---DMNEIKALPPPENYTPPPPPPPEPEPKPQQPQVTEDLVNLRDEGVTADDQGNRF 442

Query: 802  ALALFSKPAASGTNGSWEAFPSNGESEVTSAWQTPAAETGKADWELALVESASNLSKQKA 981
            ALALF+ P A+ TNGSWEAFPSNG+ EVTSAWQTPAAETGKADWELALVE+ASNLS+QKA
Sbjct: 443  ALALFAGPGANNTNGSWEAFPSNGQPEVTSAWQTPAAETGKADWELALVETASNLSRQKA 502

Query: 982  AMGGGLDPLLLNGMYDQGTVRQHASTSQLTGGSASSVAILGPGKTSTPVLALPAPDGTIQ 1161
             + GG DPLLLNGMYDQG VRQH ST+Q+TGGSASSVA+ G GK++TPVLALPAPDGT+Q
Sbjct: 503  TLAGGFDPLLLNGMYDQGMVRQHVSTAQMTGGSASSVALPGLGKSTTPVLALPAPDGTVQ 562

Query: 1162 AVGQDPFAASLTIPPPSYVQMAEIXXXXXXXXXXXXXXXXYAREGMQGQVSLAKI-GGGT 1338
             VGQDPFAASL+IPPPSYVQMA++                Y R+GMQGQ SLAK+ G G 
Sbjct: 563  TVGQDPFAASLSIPPPSYVQMADMEKKQQFLTQEQQLWQQYGRDGMQGQASLAKLAGAGY 622

Query: 1339 YAPGQPVMMPYGMPPVNGMGPSGYYY 1416
            YA G   MMPYGMPP+NGMGP G YY
Sbjct: 623  YAQGPMPMMPYGMPPINGMGPPGGYY 648


>ref|XP_003522610.1| PREDICTED: putative clathrin assembly protein At2g25430-like [Glycine
            max]
          Length = 652

 Score =  560 bits (1443), Expect = e-157
 Identities = 294/446 (65%), Positives = 338/446 (75%), Gaps = 2/446 (0%)
 Frame = +1

Query: 88   RSRSYGDVIXXXXXXXXXXXXXXXPVTPLREMKMESVLGRMSQFQRLLDRFLSCRPTGLA 267
            ++RSYGD+                 VTPLR+M  E V G+M   Q+LLDRFL+CRPTGLA
Sbjct: 211  KTRSYGDM---SESVGRGEEKRVVSVTPLRDMTPERVFGKMGHLQKLLDRFLACRPTGLA 267

Query: 268  KNSRMVMIALYQLVKESFQLYADICEILAVLLDQFFEMEYSDCVKAFEAYTSSAKQIDEL 447
            KNSRMV+IALY +VKESFQLYADICE+LAVLLD+FF+M+Y+DCVKAF+AY+S+AKQIDEL
Sbjct: 268  KNSRMVLIALYPVVKESFQLYADICEVLAVLLDKFFDMDYADCVKAFDAYSSAAKQIDEL 327

Query: 448  VGFYNWCKDTGVARSSEFPEVQRISDKLLETLEEFVRDRSKRTKSPERKXXXXXXXXXXX 627
            V FYNWCKDTGVARSSE+PEVQRI++KLLETLEEFVRDR+KR KSPERK           
Sbjct: 328  VAFYNWCKDTGVARSSEYPEVQRITNKLLETLEEFVRDRAKRPKSPERKEEVPPVEKVEE 387

Query: 628  XXXXXQDMNEIKALXXXXXXXXXXXXXXXXXXQVKQETGDLLNLADDAVSAEDQSNRLAL 807
                  DMNEIKAL                  Q  Q T DL+NL DDAV+A+DQ N+LAL
Sbjct: 388  EPAP--DMNEIKALPPPENYIPPPPPEPEPKPQ-PQVTEDLVNLRDDAVTADDQGNKLAL 444

Query: 808  ALFSKPAASGTNGSWEAFPSNGESEVTSAWQTPAAETGKADWELALVESASNLSKQKAAM 987
            ALF+   A+  NGSWEAFPSNG+ EVTSAWQTPAAE GKADWELALVE+ASNLSKQKA +
Sbjct: 445  ALFAGAPANNVNGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSKQKATL 504

Query: 988  GGGLDPLLLNGMYDQGTVRQHASTSQLTGGSASSVAILGPGKTSTPVLALPAPDGTIQAV 1167
            GGG DPLLL GMYDQG VRQH ST+QL+GGSASSVA+ GPGKT+TPVLALPAPDG++Q V
Sbjct: 505  GGGFDPLLLTGMYDQGMVRQHVSTTQLSGGSASSVALPGPGKTTTPVLALPAPDGSVQPV 564

Query: 1168 GQDPFAASLTIPPPSYVQMAEIXXXXXXXXXXXXXXXXYAREGMQGQVSLAKI-GGGTYA 1344
             QDPFAASL++PPPSYVQMA++                YAR+GMQGQ SLAK+ G G YA
Sbjct: 565  NQDPFAASLSVPPPSYVQMADMEKKQHLLVQEQQVWHQYARDGMQGQSSLAKLNGAGYYA 624

Query: 1345 PGQPVMMPYGMPPVNGMG-PSGYYYT 1419
             G   MMPYGMPPVNGMG P+GYY+T
Sbjct: 625  GGPMPMMPYGMPPVNGMGPPTGYYHT 650


>ref|XP_002515505.1| clathrin assembly protein, putative [Ricinus communis]
            gi|223545449|gb|EEF46954.1| clathrin assembly protein,
            putative [Ricinus communis]
          Length = 662

 Score =  556 bits (1434), Expect = e-156
 Identities = 293/447 (65%), Positives = 335/447 (74%), Gaps = 3/447 (0%)
 Frame = +1

Query: 88   RSRSYGDVIXXXXXXXXXXXXXXXPVTPLREMKMESVLGRMSQFQRLLDRFLSCRPTGLA 267
            RSRS+GD+                 VTPLREMK+E + G+M+  QRLLDRFL+CRPTGLA
Sbjct: 222  RSRSFGDM------SEAVPKEDRKAVTPLREMKVERIFGKMAHLQRLLDRFLACRPTGLA 275

Query: 268  KNSRMVMIALYQLVKESFQLYADICEILAVLLDQFFEMEYSDCVKAFEAYTSSAKQIDEL 447
            KNSRMV+IALY +VKESFQLYADICE+LAVLLD+FF+MEY DCVKAF+AY S+AKQIDEL
Sbjct: 276  KNSRMVLIALYPVVKESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDEL 335

Query: 448  VGFYNWCKDTGVARSSEFPEVQRISDKLLETLEEFVRDRSKRTKSPERKXXXXXXXXXXX 627
            + FYNWCKDTGV+RSSE+P+VQ+I+ KLLETLEEFVRDR+KR KSPERK           
Sbjct: 336  IMFYNWCKDTGVSRSSEYPDVQKITSKLLETLEEFVRDRAKRPKSPERKELEPPPVAQEE 395

Query: 628  XXXXXQDMNEIKALXXXXXXXXXXXXXXXXXXQVK-QETGDLLNLADDAVSAEDQSNRLA 804
                  DMNEIKAL                    + Q TGDL+NL DDAVSA+DQ NR A
Sbjct: 396  EPVP--DMNEIKALPPPEDYTPPPPAEPEPPKPPQPQVTGDLVNLRDDAVSADDQGNRFA 453

Query: 805  LALFSKPAASGTNGSWEAFPSNGESEVTSAWQTPAAETGKADWELALVESASNLSKQKAA 984
            LALF+ P A+  NGSWEAFPSNG+ +VTSAWQTPAAE GKADWELALVESASNLSKQKAA
Sbjct: 454  LALFAGPPANNGNGSWEAFPSNGDPQVTSAWQTPAAEPGKADWELALVESASNLSKQKAA 513

Query: 985  MGGGLDPLLLNGMYDQGTVRQHASTSQLTGGSASSVAILGPGKTSTPVLALPAPDGTIQA 1164
            +GGGLDPLLLNGMYDQG VRQH ST+QL+GGSASSVA+   GK++ PVLALPAPDGT++ 
Sbjct: 514  LGGGLDPLLLNGMYDQGMVRQHVSTAQLSGGSASSVALPAAGKSAAPVLALPAPDGTVET 573

Query: 1165 VGQDPFAASLTIPPPSYVQMAEIXXXXXXXXXXXXXXXXYAREGMQGQVSLAKIGG-GTY 1341
            V QDPFAASL+IPPPSYVQMA++                YA++GMQGQ SLAKI G G Y
Sbjct: 574  VNQDPFAASLSIPPPSYVQMADMEKKQQLLVQEQVVWQQYAKDGMQGQTSLAKINGTGYY 633

Query: 1342 APGQPVMMPYGMPPVNGMGP-SGYYYT 1419
              G   M PYG PP+NGMGP  GYYYT
Sbjct: 634  NAGPMPMTPYGTPPLNGMGPMPGYYYT 660


>ref|XP_003526396.1| PREDICTED: putative clathrin assembly protein At2g25430-like isoform
            1 [Glycine max] gi|356515418|ref|XP_003526397.1|
            PREDICTED: putative clathrin assembly protein
            At2g25430-like isoform 2 [Glycine max]
          Length = 641

 Score =  555 bits (1429), Expect = e-155
 Identities = 295/446 (66%), Positives = 335/446 (75%), Gaps = 2/446 (0%)
 Frame = +1

Query: 88   RSRSYGDVIXXXXXXXXXXXXXXXPVTPLREMKMESVLGRMSQFQRLLDRFLSCRPTGLA 267
            ++RSYGD+                 VTPLR+M  E V G+M   QRLLDRFL+CRPTGLA
Sbjct: 202  KTRSYGDM---SESVGRGEEKRVVSVTPLRDMTPERVFGKMGHLQRLLDRFLACRPTGLA 258

Query: 268  KNSRMVMIALYQLVKESFQLYADICEILAVLLDQFFEMEYSDCVKAFEAYTSSAKQIDEL 447
            KNSRMV+IALY +VKESFQLYADICE+LAVLLD+FF+MEY+DCVKAF+AY S+AKQIDEL
Sbjct: 259  KNSRMVLIALYPVVKESFQLYADICEVLAVLLDKFFDMEYADCVKAFDAYASAAKQIDEL 318

Query: 448  VGFYNWCKDTGVARSSEFPEVQRISDKLLETLEEFVRDRSKRTKSPERKXXXXXXXXXXX 627
            V FYNWCKDTGVARSSE+PEVQ+I+ KLLETLEEFVRDR+KR KSPERK           
Sbjct: 319  VAFYNWCKDTGVARSSEYPEVQKITSKLLETLEEFVRDRAKRPKSPERK--EEAPPVEKV 376

Query: 628  XXXXXQDMNEIKALXXXXXXXXXXXXXXXXXXQVKQETGDLLNLADDAVSAEDQSNRLAL 807
                  DMNEIKAL                  Q  Q T DL+NL DDAV+A+DQ N+ AL
Sbjct: 377  EEEPAPDMNEIKALPPPENYTPPPPPEPEPKPQ-PQVTEDLVNLRDDAVTADDQGNKFAL 435

Query: 808  ALFSKPAASGTNGSWEAFPSNGESEVTSAWQTPAAETGKADWELALVESASNLSKQKAAM 987
            ALF+   A+  NGSWEAFPSNG+ EVTSAWQTPAAE GKADWELALVE+ASNLSKQKAA+
Sbjct: 436  ALFAGAPANNANGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSKQKAAL 495

Query: 988  GGGLDPLLLNGMYDQGTVRQHASTSQLTGGSASSVAILGPGKTSTPVLALPAPDGTIQAV 1167
            GGGLDPLLL GMYDQG VRQH ST+QL+GGSASSVA+ GPGK  TPVLALPAPDG++Q V
Sbjct: 496  GGGLDPLLLTGMYDQGMVRQHVSTTQLSGGSASSVALPGPGK--TPVLALPAPDGSVQPV 553

Query: 1168 GQDPFAASLTIPPPSYVQMAEIXXXXXXXXXXXXXXXXYAREGMQGQVSLAKI-GGGTYA 1344
             QDPFAASL++PPPSYVQMA++                YAR+GMQGQ SLAK+ G G YA
Sbjct: 554  NQDPFAASLSVPPPSYVQMADMEKKQHLLVQEQQVWHQYARDGMQGQSSLAKLNGAGYYA 613

Query: 1345 PGQPVMMPYGMPPVNGMG-PSGYYYT 1419
             G   MMPYGMPPVNGMG P+GYY+T
Sbjct: 614  GGPMPMMPYGMPPVNGMGPPTGYYHT 639


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