BLASTX nr result

ID: Coptis23_contig00001599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001599
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520655.1| nucleic acid binding protein, putative [Rici...   155   4e-36
emb|CBI39492.3| unnamed protein product [Vitis vinifera]              154   1e-35
ref|XP_002284051.1| PREDICTED: zinc finger protein MAGPIE [Vitis...   154   1e-35
ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis...   153   1e-35
emb|CBI32240.3| unnamed protein product [Vitis vinifera]              153   1e-35

>ref|XP_002520655.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223540040|gb|EEF41617.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 631

 Score =  155 bits (391), Expect = 4e-36
 Identities = 68/84 (80%), Positives = 73/84 (86%)
 Frame = -2

Query: 252 PWKLRQRSTTDIRKRVYICPEPTCVHHNPSRALGDLTGIKKHFSRKHGEXXXXXXXXXXK 73
           PWKLRQR+TT+++KRVYICPEPTCVHHNP+RALGDLTGIKKHFSRKHGE          K
Sbjct: 139 PWKLRQRTTTEVKKRVYICPEPTCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKK 198

Query: 72  YAVQSDWKAHSKTCGTREYKCDCG 1
           YAVQSDWKAH KTCGTREYKCDCG
Sbjct: 199 YAVQSDWKAHQKTCGTREYKCDCG 222


>emb|CBI39492.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  154 bits (388), Expect = 1e-35
 Identities = 68/84 (80%), Positives = 73/84 (86%)
 Frame = -2

Query: 252 PWKLRQRSTTDIRKRVYICPEPTCVHHNPSRALGDLTGIKKHFSRKHGEXXXXXXXXXXK 73
           PWKLRQRS+T+IRKRVY+CPEP+CVHHNP+RALGDLTGIKKHF RKHGE          K
Sbjct: 112 PWKLRQRSSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKK 171

Query: 72  YAVQSDWKAHSKTCGTREYKCDCG 1
           YAVQSDWKAHSKTCGTREYKCDCG
Sbjct: 172 YAVQSDWKAHSKTCGTREYKCDCG 195


>ref|XP_002284051.1| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]
          Length = 531

 Score =  154 bits (388), Expect = 1e-35
 Identities = 68/84 (80%), Positives = 73/84 (86%)
 Frame = -2

Query: 252 PWKLRQRSTTDIRKRVYICPEPTCVHHNPSRALGDLTGIKKHFSRKHGEXXXXXXXXXXK 73
           PWKLRQRS+T+IRKRVY+CPEP+CVHHNP+RALGDLTGIKKHF RKHGE          K
Sbjct: 112 PWKLRQRSSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKK 171

Query: 72  YAVQSDWKAHSKTCGTREYKCDCG 1
           YAVQSDWKAHSKTCGTREYKCDCG
Sbjct: 172 YAVQSDWKAHSKTCGTREYKCDCG 195


>ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]
          Length = 570

 Score =  153 bits (387), Expect = 1e-35
 Identities = 68/84 (80%), Positives = 73/84 (86%)
 Frame = -2

Query: 252 PWKLRQRSTTDIRKRVYICPEPTCVHHNPSRALGDLTGIKKHFSRKHGEXXXXXXXXXXK 73
           PWKLRQR+T +IRKRVYICPEP+CVHHNP+RALGDLTGIKKH+SRKHGE          K
Sbjct: 121 PWKLRQRTTNEIRKRVYICPEPSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKK 180

Query: 72  YAVQSDWKAHSKTCGTREYKCDCG 1
           YAVQSDWKAHSKTCGTREYKCDCG
Sbjct: 181 YAVQSDWKAHSKTCGTREYKCDCG 204


>emb|CBI32240.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  153 bits (387), Expect = 1e-35
 Identities = 68/84 (80%), Positives = 73/84 (86%)
 Frame = -2

Query: 252 PWKLRQRSTTDIRKRVYICPEPTCVHHNPSRALGDLTGIKKHFSRKHGEXXXXXXXXXXK 73
           PWKLRQR+T +IRKRVYICPEP+CVHHNP+RALGDLTGIKKH+SRKHGE          K
Sbjct: 31  PWKLRQRTTNEIRKRVYICPEPSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKK 90

Query: 72  YAVQSDWKAHSKTCGTREYKCDCG 1
           YAVQSDWKAHSKTCGTREYKCDCG
Sbjct: 91  YAVQSDWKAHSKTCGTREYKCDCG 114


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