BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001598
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis...   276   1e-71
ref|XP_002520655.1| nucleic acid binding protein, putative [Rici...   249   1e-63
gb|ABK94869.1| unknown [Populus trichocarpa]                          208   3e-51
gb|ADV56701.1| zinc finger protein [Phaseolus vulgaris]               207   3e-51
emb|CBI39492.3| unnamed protein product [Vitis vinifera]              198   3e-48

>ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]
          Length = 570

 Score =  276 bits (705), Expect = 1e-71
 Identities = 175/380 (46%), Positives = 228/380 (60%), Gaps = 18/380 (4%)
 Frame = -2

Query: 1238 YKCDCGTIFSRRDSFITHRAFCDALAEENNKINQGLMTSNMGGNVQDQV-----XXXXXX 1074
            YKCDCGTIFSRRDSFITHRAFCDALAEENNK+NQGLM +NMG N+Q Q+           
Sbjct: 199  YKCDCGTIFSRRDSFITHRAFCDALAEENNKVNQGLM-ANMGSNLQSQMPELMSSMPLNS 257

Query: 1073 XXXXXXXXXXXPEFDLKNPMKTLSHELMPMPIRPLNMGQGMLSCSSGTLFGGPRNM-PXX 897
                         +D KNP+K+L  +L+PMP +  NM  GM S SSGTLFGGPR++    
Sbjct: 258  NSSPSVGISEFNSYDPKNPLKSLPQDLVPMPFKSPNMSGGMFSSSSGTLFGGPRSISSSS 317

Query: 896  XXXXXXXXXXXSFNGLHD----QQLTASANMSATALLQKAAQMGATASSNVNTPMMQKSL 729
                        FN L D     QL+ SANMSATALLQKAAQMGATAS+++N+PMMQKS 
Sbjct: 318  SGLQLSSNSSSGFNYLQDGKNGTQLSGSANMSATALLQKAAQMGATASNSINSPMMQKSF 377

Query: 728  VSSMVGSDQLSGIRPISYGGGQMPHNNSYHNIQSQTDQLQLVGMDGGFI-RQYLPRGRQE 552
            VSSM  + +LS IRP  Y   Q   N+  H+ QSQ DQ  LVG++GG +  Q+L +G  E
Sbjct: 378  VSSM-AAPELSSIRPSPYVTIQQQTNSYDHHFQSQPDQSPLVGINGGGLPSQFLQKGPPE 436

Query: 551  M-PQHGNFNAAMGIDNSSVTDTGMYSGMYMNGNQDHGYLKNMEQENAVVTTSTLQG---- 387
            + P     + +  ++N    D GM+  +++ G+Q+  +LKNME E++  T+S  QG    
Sbjct: 437  ITPLFQTVSGSASMNN----DIGMFGNVFIGGDQNSPFLKNMENEDSSSTSSLAQGRTVM 492

Query: 386  -RSANSSLDIPTSGHGQDVMTVDFLGMGGSRSANLXXXXXXXXXXXXXXXEAISQPKLQG 210
             RSA        +G G+DV T+D LG+GGSR  NL               EA+SQ ++Q 
Sbjct: 493  ARSATGPSRFGGNGEGKDVTTLDLLGVGGSRPVNL------QEQQQRLELEAMSQHRMQA 546

Query: 209  -DPFQQQLSYGHAVMEKPMW 153
               FQQQLS+G   +E+ ++
Sbjct: 547  MTTFQQQLSHGEPAIEQGLY 566


>ref|XP_002520655.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223540040|gb|EEF41617.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 631

 Score =  249 bits (635), Expect = 1e-63
 Identities = 175/422 (41%), Positives = 229/422 (54%), Gaps = 59/422 (13%)
 Frame = -2

Query: 1238 YKCDCGTIFSR----------------------------RDSFITHRAFCDALAEENNKI 1143
            YKCDCGTIFSR                            RDSFITHRAFCDALAEENNK+
Sbjct: 217  YKCDCGTIFSRIYVPALVCNLALLSISLLTLLFNDQSCRRDSFITHRAFCDALAEENNKV 276

Query: 1142 NQGLMTSNMGGNVQDQVXXXXXXXXXXXXXXXXXPE-FDLKNPMKTLSHELMPMPIRPLN 966
            NQGL  S++   + + +                    FD KNP+K+L  EL+PMP + +N
Sbjct: 277  NQGLTGSHLQNQMPELMSSMPLTTNTNTSIGISDFNSFDPKNPLKSLPQELVPMPFKSMN 336

Query: 965  MGQGMLSCSSGTLFGGPRNMPXXXXXXXXXXXXXS-FNGLHDQ----QLTASANMSATAL 801
            M  GM S SSGTLFGGPR++              S +N L D     Q+++SA MSATAL
Sbjct: 337  MAGGMFSSSSGTLFGGPRSIASTSSSLQLSSNSSSGYNYLQDGKNGCQISSSAQMSATAL 396

Query: 800  LQKAAQMGATASSNVNTPMMQKSLVSSMVGSDQLSGI-----RPISYGGGQMPHNN--SY 642
            LQKAAQMGATAS+++N+PMMQKS  SSM   DQ+  I     RP S+GG Q  HNN  SY
Sbjct: 397  LQKAAQMGATASNSINSPMMQKSFASSMACPDQIIPIRPQLPRPPSFGGVQQ-HNNTTSY 455

Query: 641  HNIQSQ--TDQLQLVGMDGGFIRQ---YLPRGRQEMPQHGNFNAAMGIDNSSVTDTGMYS 477
             +  S    DQ  LVG++GG   Q    L +G+QEM Q  +  ++ G     ++D GM S
Sbjct: 456  DHFPSSQLLDQTHLVGINGGGYNQPNGTLQKGQQEMSQFFDPTSSSG-----MSDMGMLS 510

Query: 476  GMYMNGNQDHGYLKNMEQEN-----AVVTTSTLQGR-------SANSSLDIPTSGHGQDV 333
             M+M  +Q+ G++KN+E  N     +  TTS + GR       ++  S  +  +G   D+
Sbjct: 511  TMFMGTDQNPGFMKNIEHSNNDHQDSGNTTSLIHGRAHSMERTASGPSRLVGHNGESSDM 570

Query: 332  MTVDFLGMGGSRSANLXXXXXXXXXXXXXXXEAISQPKL-QGDPFQQQLSYGHAVMEKPM 156
            MT DF+G+GGSR ANL                A+SQ ++     FQQQLS G + MEKP+
Sbjct: 571  MTRDFMGIGGSRPANL--HEQQQQQQQRMEMGAMSQQRMPMMSHFQQQLSLGESAMEKPI 628

Query: 155  WD 150
            W+
Sbjct: 629  WE 630


>gb|ABK94869.1| unknown [Populus trichocarpa]
          Length = 437

 Score =  208 bits (529), Expect = 3e-51
 Identities = 153/379 (40%), Positives = 195/379 (51%), Gaps = 16/379 (4%)
 Frame = -2

Query: 1238 YKCDCGTIFSRRDSFITHRAFCDALAEENNKINQGLMTSNMGGNVQDQV-----XXXXXX 1074
            YKCDCGTIFSRRDSFITHRAFCDALAEEN K NQGLM  NM  N+Q QV           
Sbjct: 109  YKCDCGTIFSRRDSFITHRAFCDALAEENTKANQGLM-PNMEPNLQGQVSNLIPSMAINN 167

Query: 1073 XXXXXXXXXXXPEFDLKNPMKTLSHELMPMPIRPLNMGQGMLSCSSGTLFGGPRNMPXXX 894
                          D KNP+ +L  ELMP P +P      M S  +  LFGG R+M    
Sbjct: 168  NPNQSTMMSSFNHLDAKNPL-SLPQELMPTPPKP--SSGSMFSNGTTGLFGGSRSMSPSL 224

Query: 893  XXXXXXXXXXSFNGLHDQQLTASANMSATALLQKAAQMGATASS-NVNTPMMQKSLVSSM 717
                        NGLH+  L+ SA+MSATALLQKAAQMGATASS NV++PMMQKS V+SM
Sbjct: 225  QLNANSSTIFEGNGLHN--LSGSASMSATALLQKAAQMGATASSNNVSSPMMQKSFVTSM 282

Query: 716  VGSDQLSGIRPISYGGGQMPHNNSYHNIQSQTDQLQLVGMDGGFIRQYLPRGRQEMPQHG 537
                      P ++G            + +Q DQ  ++G D G+  Q+            
Sbjct: 283  A---------PPTFG-----------TMHTQNDQSHVIGGDDGYANQF------------ 310

Query: 536  NFNAAMGIDNSSVTDTGMYSGMYMNGNQDHGYLKNMEQENAVVTTSTLQGRSANSSLDIP 357
             F+A  G++NS + D G++S +    +Q++   K ME  ++    +  QG ++N  L  P
Sbjct: 311  -FSANGGVENSVLNDMGIFSAVL---DQNNSLFKTMEHASS-NNENVFQGANSNPGLSSP 365

Query: 356  TSGHGQ---------DVMTVDFLGMGGSRSANLXXXXXXXXXXXXXXXEAISQPKLQG-D 207
            TSG            DVMTVDFLG+GGSR  NL                 IS P++QG +
Sbjct: 366  TSGANPSGLSRFSTGDVMTVDFLGLGGSRQRNL---HQQHNHQEMEFTRGISHPRMQGLN 422

Query: 206  PFQQQLSYGHAVMEKPMWD 150
             F+Q        ++KPMWD
Sbjct: 423  HFEQA-----TALKKPMWD 436


>gb|ADV56701.1| zinc finger protein [Phaseolus vulgaris]
          Length = 515

 Score =  207 bits (528), Expect = 3e-51
 Identities = 138/324 (42%), Positives = 178/324 (54%), Gaps = 9/324 (2%)
 Frame = -2

Query: 1238 YKCDCGTIFSRRDSFITHRAFCDALAEENNKINQGLMTSNMGGNVQDQVXXXXXXXXXXX 1059
            YKCDCGTIFSRRDSFITHRAFCDAL EENN++NQGL TS M  N+Q Q+           
Sbjct: 194  YKCDCGTIFSRRDSFITHRAFCDALTEENNRVNQGL-TSGMPPNLQSQI---PDLMSTMP 249

Query: 1058 XXXXXXPEFDLKNPMKTLSHELMPMPIRPLNMGQGMLSCSSGTLFGGPRNM-PXXXXXXX 882
                    +D KNP+K+L  EL+P+P + ++MG GM S ++G LFGGP+ M P       
Sbjct: 250  LNTSPNTAYDPKNPLKSLPQELVPIPFKSMSMGGGMFSTNAGALFGGPKTMPPSSSNLQL 309

Query: 881  XXXXXXSFNGLHDQQ----LTASANMSATALLQKAAQMGATASSNVNTPMMQKSLVSSMV 714
                  SFN L D +    + ASA MSATALLQKAAQMG                V+   
Sbjct: 310  GSNTSSSFNYLQDNKSAGLIAASAQMSATALLQKAAQMG---------------FVTGTT 354

Query: 713  GSDQLSGIRPISYGGGQMPHNNSYHNIQSQTDQLQLVGMDGG--FIRQYLPRGRQEMPQH 540
              D +S  RP  Y G  + HNNSY +   Q D   + G+ GG  FI Q   +G QE+ Q 
Sbjct: 355  APDHVSSTRP-PYSGAMLQHNNSYEHFCPQPDLSNMAGVSGGGAFINQLFHKG-QEISQV 412

Query: 539  GNFNAAMGIDNSSVTDTGMYSGMYMNGNQDHGYLKNMEQENAVVTTSTLQGRSANSSLDI 360
             + N A     S++ D GM+S M +  + + G +KN+EQE     +S + GR       +
Sbjct: 413  FDTNTA----GSNINDVGMFSQMPLGSDHNPGLMKNVEQE-VSNCSSLIHGRDVVEGNPM 467

Query: 359  -PTSGHGQDVMTV-DFLGMGGSRS 294
             P+   G D+ TV DFLG+GGS S
Sbjct: 468  QPSRFGGSDMTTVHDFLGIGGSTS 491


>emb|CBI39492.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  198 bits (503), Expect = 3e-48
 Identities = 143/372 (38%), Positives = 184/372 (49%), Gaps = 8/372 (2%)
 Frame = -2

Query: 1238 YKCDCGTIFSRRDSFITHRAFCDALAEENNKINQGLM-TSNMGGNVQDQV--XXXXXXXX 1068
            YKCDCGTIFSRRDSFITHRAFCDALAEEN K+NQGL  T      +Q QV          
Sbjct: 190  YKCDCGTIFSRRDSFITHRAFCDALAEENTKVNQGLANTMRRNLQIQGQVSELLSSMPLN 249

Query: 1067 XXXXXXXXXPEF---DLKNPMKTLSHELMPMPIRPLNM-GQGMLSCSSGTLFGGPRNMPX 900
                      EF   D KN +KTL HE MP+P +PLNM   GM S +SG+LFG P     
Sbjct: 250  NNPNSTMGLSEFTHSDSKNHLKTLPHEPMPVPPKPLNMAAAGMFSTTSGSLFGCPITASF 309

Query: 899  XXXXXXXXXXXXSFNGLHDQQLTASANMSATALLQKAAQMGATASSNVNTPMMQKSLVSS 720
                          NG       AS  MSATALLQKAAQMGATAS+ +N     K  V+S
Sbjct: 310  E-------------NGQQLPPPPASTLMSATALLQKAAQMGATASTKMNN-SPPKGFVTS 355

Query: 719  MVGSDQLSGIRPISYGGGQMPHNNSYHNIQSQTDQLQLVGMDGGFIRQYLPRGRQEMPQH 540
            M          P  +GG  +  N+S ++   Q D  Q       F+ Q+           
Sbjct: 356  MA---------PTPFGGILLQKNSSSNDHHLQADPTQ-------FLNQF----------- 388

Query: 539  GNFNAAMGIDNSSVTDTGMYSGMYMNGNQDHGYLKNMEQENAVVTTSTLQGRSANSSLDI 360
              F    G ++  +++ GM+SG++   +Q+HG  KNME      + + L  ++ N  L  
Sbjct: 389  --FYQNDGAESEVMSEMGMFSGLF---DQNHGLFKNMEHHEHSNSNNILAAKTTNPGLSS 443

Query: 359  PTSGHGQDVMTVDFLGMGGSRSANLXXXXXXXXXXXXXXXEAISQPKLQG-DPFQQQLSY 183
                   D MTVDFLG+GG+R  N                  I+ P++QG   F+Q +++
Sbjct: 444  TPRNGKTDTMTVDFLGIGGARPGNFHGQQQQQQEMFEGMN--INHPRMQGFSSFEQHIAH 501

Query: 182  GHAVMEKPMWDA 147
            G A MEK MW+A
Sbjct: 502  GQAAMEKTMWEA 513