BLASTX nr result

ID: Coptis23_contig00001594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001594
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN52613.1| acetyl-CoA carboxylase BCCP subunit [Jatropha cur...   156   5e-36
gb|ACT33948.1| biotin carboxyl carrier protein subunit [Jatropha...   152   6e-35
ref|XP_002284374.1| PREDICTED: biotin carboxyl carrier protein o...   152   6e-35
ref|XP_002526099.1| Biotin carboxyl carrier protein subunit of o...   152   9e-35
ref|XP_004139256.1| PREDICTED: biotin carboxyl carrier protein o...   148   1e-33

>gb|ADN52613.1| acetyl-CoA carboxylase BCCP subunit [Jatropha curcas]
          Length = 285

 Score =  156 bits (394), Expect = 5e-36
 Identities = 85/152 (55%), Positives = 91/152 (59%), Gaps = 6/152 (3%)
 Frame = +1

Query: 313 FMTQVSDLVKLVDSRDITELQLKQLDCELIIRKKEALPQPPAAAPVYMMQPPGQ------ 474
           F+TQV+ LVKLVDSRDI ELQLKQLDCE+IIRKKEALPQPP+ APV MM  P Q      
Sbjct: 114 FITQVASLVKLVDSRDIVELQLKQLDCEVIIRKKEALPQPPSPAPVVMMHSPSQSPPPLM 173

Query: 475 HVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPPLKCPMAGTFYRCSGPGEPPFXXX 654
           H                                 HPPLKCPMAGTFYR S PGEPPF   
Sbjct: 174 HSAPPAASSTAPSPASSAPPPPPSAPAVKPSKSSHPPLKCPMAGTFYRSSAPGEPPFVKV 233

Query: 655 XXXXXXXXXXCIVEAMKLMNEIEADQSGTVVE 750
                     CI+EAMKLMNEIEADQSGT+VE
Sbjct: 234 GDKVQKGQVLCIIEAMKLMNEIEADQSGTIVE 265


>gb|ACT33948.1| biotin carboxyl carrier protein subunit [Jatropha curcas]
          Length = 270

 Score =  152 bits (385), Expect = 6e-35
 Identities = 84/148 (56%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
 Frame = +1

Query: 313 FMTQVSDLVKLVDSRDITELQLKQLDCELIIRKKEALPQPPAAAPVYMMQPPGQHVL--X 486
           FMTQVSDLVKLVDSRDITELQLKQL C+LIIRKKEAL QPP AAPV  M P  QH +   
Sbjct: 103 FMTQVSDLVKLVDSRDITELQLKQLGCQLIIRKKEALQQPPPAAPVIAMPPSYQHTMLPS 162

Query: 487 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPPLKCPMAGTFYRCSGPGEPPFXXXXXXX 666
                                         HPPLKCPMAGTFYR   PGEPPF       
Sbjct: 163 PPPAAPASAPPSSPPLALALPPPAKTSSSSHPPLKCPMAGTFYRNPAPGEPPFVKVGDKV 222

Query: 667 XXXXXXCIVEAMKLMNEIEADQSGTVVE 750
                 CI+EAMKLMNEIEADQ+GT+ E
Sbjct: 223 QKGQVVCIIEAMKLMNEIEADQAGTIAE 250


>ref|XP_002284374.1| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase 2, chloroplastic [Vitis vinifera]
           gi|296082996|emb|CBI22297.3| unnamed protein product
           [Vitis vinifera]
          Length = 270

 Score =  152 bits (385), Expect = 6e-35
 Identities = 84/150 (56%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
 Frame = +1

Query: 313 FMTQVSDLVKLVDSRDITELQLKQLDCELIIRKKEALPQPPAAAPVYMMQPPGQHVL--- 483
           FM+QVSDLVKLVDSRDI EL+LKQL CEL+IRKKEALPQPPA A V  MQPP  H +   
Sbjct: 101 FMSQVSDLVKLVDSRDIMELELKQLGCELLIRKKEALPQPPATASVITMQPPLPHSMLPY 160

Query: 484 -XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPPLKCPMAGTFYRCSGPGEPPFXXXXX 660
                                           HPPLKCPMAGTFY+  GPGEPPF     
Sbjct: 161 QPPPAQVVAPASTAPSVPTPALPAPAQTSKSSHPPLKCPMAGTFYQSPGPGEPPFVKVGD 220

Query: 661 XXXXXXXXCIVEAMKLMNEIEADQSGTVVE 750
                   CIVEAMKLMNEIEADQSGT+ E
Sbjct: 221 KVQKGQVVCIVEAMKLMNEIEADQSGTIAE 250


>ref|XP_002526099.1| Biotin carboxyl carrier protein subunit of of Het-ACCase (BCCP2)
           [Ricinus communis] gi|223534596|gb|EEF36293.1| Biotin
           carboxyl carrier protein subunit of of Het-ACCase
           (BCCP2) [Ricinus communis]
          Length = 260

 Score =  152 bits (383), Expect = 9e-35
 Identities = 85/146 (58%), Positives = 89/146 (60%)
 Frame = +1

Query: 313 FMTQVSDLVKLVDSRDITELQLKQLDCELIIRKKEALPQPPAAAPVYMMQPPGQHVLXXX 492
           FMTQVSDLVKLVDSRDITELQLKQLDCE+IIRKKEAL QPP AA V  M P  QHV+   
Sbjct: 98  FMTQVSDLVKLVDSRDITELQLKQLDCEIIIRKKEAL-QPPPAAQVISMPPSYQHVM--L 154

Query: 493 XXXXXXXXXXXXXXXXXXXXXXXXXXXXHPPLKCPMAGTFYRCSGPGEPPFXXXXXXXXX 672
                                       HP  KCPMAGTFYRC  PGEPPF         
Sbjct: 155 PPPPSAAPPPSSAPAPALPSPAKAVTSSHPAFKCPMAGTFYRCPAPGEPPFVKVGDKVQK 214

Query: 673 XXXXCIVEAMKLMNEIEADQSGTVVE 750
               CI+EAMKLMNEIEADQSGT+ E
Sbjct: 215 GQVVCIIEAMKLMNEIEADQSGTITE 240


>ref|XP_004139256.1| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase 1, chloroplastic-like [Cucumis sativus]
           gi|449520837|ref|XP_004167439.1| PREDICTED: biotin
           carboxyl carrier protein of acetyl-CoA carboxylase 1,
           chloroplastic-like [Cucumis sativus]
          Length = 276

 Score =  148 bits (373), Expect = 1e-33
 Identities = 80/148 (54%), Positives = 88/148 (59%), Gaps = 2/148 (1%)
 Frame = +1

Query: 313 FMTQVSDLVKLVDSRDITELQLKQLDCELIIRKKEALPQPPAAAPVYMMQPPGQHVLXXX 492
           F+TQVS L+KLVDSRDI ELQLKQLDCE++IRKKEALPQPP  A + MM  P   V    
Sbjct: 109 FITQVSSLIKLVDSRDIVELQLKQLDCEVVIRKKEALPQPPPPAAIPMMYAPPPSVAQSA 168

Query: 493 XXXXXXXXXXXXXXXXXXXXXXXXXXXXH--PPLKCPMAGTFYRCSGPGEPPFXXXXXXX 666
                                          PPLKCPMAGTFYRC GPG+PPF       
Sbjct: 169 PPPMPAALPAPASASSPPSSPPPAKSAASSLPPLKCPMAGTFYRCPGPGQPPFVKVGDRV 228

Query: 667 XXXXXXCIVEAMKLMNEIEADQSGTVVE 750
                 CI+EAMKLMNEIEADQSGT+VE
Sbjct: 229 KKGQVLCIIEAMKLMNEIEADQSGTIVE 256


Top