BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001592
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [...   368   2e-99
gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90...   358   1e-96
ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|2...   350   3e-94
ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|1...   347   2e-93
gb|AFK33945.1| unknown [Lotus japonicus]                              336   5e-90

>ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [Vitis vinifera]
           gi|298204604|emb|CBI23879.3| unnamed protein product
           [Vitis vinifera]
          Length = 229

 Score =  368 bits (944), Expect = 2e-99
 Identities = 183/229 (79%), Positives = 206/229 (89%)
 Frame = +1

Query: 82  MPKSKRNRAVTLSKTKKKGRGHKEEIVNTIRQAIENYNSIYVFTYENMRNLKFKEFREQL 261
           MPKSKR+R VTLSKTKKKGRGHKE IVN+IRQA+ENY+SIYVF++ENMRNLKFKEFRE+L
Sbjct: 1   MPKSKRDRPVTLSKTKKKGRGHKESIVNSIRQAVENYSSIYVFSFENMRNLKFKEFREKL 60

Query: 262 KSTSRFFLGSNKVMQVSLGRSDSDEIRHGLYKVSKLLRGNSGLFFTNLPKXXXXXXXXXX 441
           KSTSRFFLGSNKVMQ+++GRS +DEIR GL KVSKLL G++GLFFTNLPK          
Sbjct: 61  KSTSRFFLGSNKVMQIAIGRSVADEIRPGLRKVSKLLHGDTGLFFTNLPKEEVQRLFNEY 120

Query: 442 XXHDFARTGSTITEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 621
             +DFARTGST  EKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EEYDFARTGSTAVEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180

Query: 622 SSLSPESARILRLLGIQMATFRLQLLCRWSPEDFEVFKEGLEFSDVESS 768
           + LSPESARILRLLGI+MATFRL L+CRWSP++F+++KEGL+ SDVESS
Sbjct: 181 TPLSPESARILRLLGIKMATFRLHLVCRWSPDEFDLYKEGLDDSDVESS 229


>gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90616.1| putative
           ribosomal protein L1 [Solanum tuberosum]
          Length = 229

 Score =  358 bits (919), Expect = 1e-96
 Identities = 177/229 (77%), Positives = 202/229 (88%)
 Frame = +1

Query: 82  MPKSKRNRAVTLSKTKKKGRGHKEEIVNTIRQAIENYNSIYVFTYENMRNLKFKEFREQL 261
           MPKSKRNRAVTLSKTKKKG+ HKE IVN+IR+  E Y+S YVF++ENMRNLKFKEFR+QL
Sbjct: 1   MPKSKRNRAVTLSKTKKKGKEHKENIVNSIRECAEKYSSAYVFSFENMRNLKFKEFRDQL 60

Query: 262 KSTSRFFLGSNKVMQVSLGRSDSDEIRHGLYKVSKLLRGNSGLFFTNLPKXXXXXXXXXX 441
           KS+SRFFLGSNKVMQV+LGRSDSDEIR GL+K+SKL+RG+SGL FTNL K          
Sbjct: 61  KSSSRFFLGSNKVMQVALGRSDSDEIRPGLHKISKLVRGDSGLCFTNLSKEEVQRLFNEY 120

Query: 442 XXHDFARTGSTITEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 621
             HDFARTG+T TEKVEL+EGPLDQFTHEMEPFLRKQGMPVRLN+GVVELVSDFVVCEEG
Sbjct: 121 EEHDFARTGTTATEKVELQEGPLDQFTHEMEPFLRKQGMPVRLNRGVVELVSDFVVCEEG 180

Query: 622 SSLSPESARILRLLGIQMATFRLQLLCRWSPEDFEVFKEGLEFSDVESS 768
             LSPE+ARILRLLG +MATFRL L+CRWSP++FE+++EGLE SD+ESS
Sbjct: 181 RPLSPEAARILRLLGKKMATFRLHLICRWSPDEFEIYREGLEESDIESS 229


>ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|222860140|gb|EEE97687.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  350 bits (899), Expect = 3e-94
 Identities = 176/229 (76%), Positives = 198/229 (86%)
 Frame = +1

Query: 82  MPKSKRNRAVTLSKTKKKGRGHKEEIVNTIRQAIENYNSIYVFTYENMRNLKFKEFREQL 261
           MPKSKRNR VTLSKTKKKGR HKE IVN+IR A+E YNSIYVF++ENMRNLKFKEFREQ 
Sbjct: 1   MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQH 60

Query: 262 KSTSRFFLGSNKVMQVSLGRSDSDEIRHGLYKVSKLLRGNSGLFFTNLPKXXXXXXXXXX 441
           K TSRFFLGSNKVMQVSLGRS +DEIR GL+KVSKLL G+SGLF TNL +          
Sbjct: 61  KLTSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDSGLFLTNLSREEVERLFNEY 120

Query: 442 XXHDFARTGSTITEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 621
             +DFARTG+T TE VELKEGPL+QFTHEMEPFLRKQGMPVRLNKGV++LVS+FVVCEEG
Sbjct: 121 EEYDFARTGTTATEMVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIDLVSNFVVCEEG 180

Query: 622 SSLSPESARILRLLGIQMATFRLQLLCRWSPEDFEVFKEGLEFSDVESS 768
             LSPES+RILRLLG +MATFRL L+CRWSPEDFE+++EGL+ SDVES+
Sbjct: 181 KPLSPESSRILRLLGTKMATFRLHLICRWSPEDFELYREGLDESDVESA 229


>ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|118486150|gb|ABK94918.1|
           unknown [Populus trichocarpa]
           gi|222846270|gb|EEE83817.1| predicted protein [Populus
           trichocarpa]
          Length = 229

 Score =  347 bits (891), Expect = 2e-93
 Identities = 175/229 (76%), Positives = 196/229 (85%)
 Frame = +1

Query: 82  MPKSKRNRAVTLSKTKKKGRGHKEEIVNTIRQAIENYNSIYVFTYENMRNLKFKEFREQL 261
           MPKSKRNR VTLSKTKKKGR HKE IVN+IR A+E YNSIYVF++ENMRNLKFKEFREQ 
Sbjct: 1   MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQH 60

Query: 262 KSTSRFFLGSNKVMQVSLGRSDSDEIRHGLYKVSKLLRGNSGLFFTNLPKXXXXXXXXXX 441
           K TSRFFLGSNKVMQVSLGRS +DEIR GL+KVSKLL G++GLF TNLP+          
Sbjct: 61  KLTSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDAGLFLTNLPREEVERLFNEY 120

Query: 442 XXHDFARTGSTITEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 621
             +DFARTG+T TE VELKEGPL+QFTHEMEPFLRKQGMPVRLNKGV+ELVSDFVV EEG
Sbjct: 121 EEYDFARTGTTATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIELVSDFVVSEEG 180

Query: 622 SSLSPESARILRLLGIQMATFRLQLLCRWSPEDFEVFKEGLEFSDVESS 768
             LSPE ARILRLLG + ATF+L L+CRWSPEDFE+++EGL+ SDVES+
Sbjct: 181 KPLSPECARILRLLGTKTATFKLHLICRWSPEDFELYREGLDDSDVESA 229


>gb|AFK33945.1| unknown [Lotus japonicus]
          Length = 229

 Score =  336 bits (862), Expect = 5e-90
 Identities = 169/229 (73%), Positives = 194/229 (84%)
 Frame = +1

Query: 82  MPKSKRNRAVTLSKTKKKGRGHKEEIVNTIRQAIENYNSIYVFTYENMRNLKFKEFREQL 261
           MPKSKRN+ VTLSKTKKKGR HKE IVN IR A E Y+S+YVF++ENMRNLKFKEFR++L
Sbjct: 1   MPKSKRNKQVTLSKTKKKGREHKEVIVNAIRDAAEKYSSLYVFSFENMRNLKFKEFRDRL 60

Query: 262 KSTSRFFLGSNKVMQVSLGRSDSDEIRHGLYKVSKLLRGNSGLFFTNLPKXXXXXXXXXX 441
           KS+SRFFLGSNKVMQV+LGRS SDEI+  LYKVSKLLRG+SG+FFTNL K          
Sbjct: 61  KSSSRFFLGSNKVMQVALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGY 120

Query: 442 XXHDFARTGSTITEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 621
             +DFARTG   TEKV+L+EGPL+QFTHEMEPFLRKQGMPVRLNKGVVELVSD VVCEEG
Sbjct: 121 EEYDFARTGGIATEKVDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDLVVCEEG 180

Query: 622 SSLSPESARILRLLGIQMATFRLQLLCRWSPEDFEVFKEGLEFSDVESS 768
             LSPE++RILRLLGI+MATFRL L+CRW+P+DFE++ +G   SDVE S
Sbjct: 181 KPLSPEASRILRLLGIKMATFRLHLVCRWTPDDFELYIDGPGDSDVECS 229