BLASTX nr result

ID: Coptis23_contig00001591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001591
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16931.1| unknown [Picea sitchensis]                             119   3e-25
ref|XP_002533230.1| conserved hypothetical protein [Ricinus comm...   108   5e-22
ref|XP_002276573.2| PREDICTED: uncharacterized protein LOC100253...   106   2e-21
emb|CBI36553.3| unnamed protein product [Vitis vinifera]              106   2e-21
emb|CAN67151.1| hypothetical protein VITISV_019728 [Vitis vinifera]   106   2e-21

>gb|ABR16931.1| unknown [Picea sitchensis]
          Length = 167

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/109 (55%), Positives = 78/109 (71%)
 Frame = +2

Query: 5   MSFLDEWFLLERDHVNSLSGAVDALEACTIRLPVIGGARVDVHKVKDAISSAIDVMQAAC 184
           M +L+EW LLERDH +SLSGAV+ALEA T+RLPV GGAR D+  VK+A+SSA+DVMQA  
Sbjct: 23  MLYLEEWALLERDHSSSLSGAVEALEAATLRLPVTGGARADIQAVKEAVSSAVDVMQAMG 82

Query: 185 DGIYSVLSKMEGLSHLIXXXXXXXXXXXXILYECEDLLALTLAMQVKEN 331
             I S+L K+EG++HL+            +L EC D LA T AM+V+E+
Sbjct: 83  SSICSLLPKVEGMNHLVSELAEVAAQEKSLLDECVDFLATTAAMEVEES 131


>ref|XP_002533230.1| conserved hypothetical protein [Ricinus communis]
           gi|223526950|gb|EEF29151.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 608

 Score =  108 bits (270), Expect = 5e-22
 Identities = 57/108 (52%), Positives = 75/108 (69%)
 Frame = +2

Query: 5   MSFLDEWFLLERDHVNSLSGAVDALEACTIRLPVIGGARVDVHKVKDAISSAIDVMQAAC 184
           M++LDEW  LERDHV+SLSGAV+ LEA T+R+PV GGA+ D+  +K A  SA+DVMQA  
Sbjct: 471 MAYLDEWAFLERDHVSSLSGAVEDLEATTLRIPVTGGAKADIDSLKVATCSAVDVMQAIG 530

Query: 185 DGIYSVLSKMEGLSHLIXXXXXXXXXXXXILYECEDLLALTLAMQVKE 328
             I S+LSK+EG++ L+            +L ECE LLA T A+QV+E
Sbjct: 531 SSICSLLSKVEGVNVLVSELAIVAAEEKAMLDECEALLASTAALQVEE 578


>ref|XP_002276573.2| PREDICTED: uncharacterized protein LOC100253614 [Vitis vinifera]
          Length = 641

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/108 (52%), Positives = 74/108 (68%)
 Frame = +2

Query: 5   MSFLDEWFLLERDHVNSLSGAVDALEACTIRLPVIGGARVDVHKVKDAISSAIDVMQAAC 184
           M++LD+W L+ERDH NSLSGA++ LEA T+RLPV GGAR D+  VK AI SA+DVMQA  
Sbjct: 506 MAYLDDWALIERDHSNSLSGAIEDLEASTLRLPVTGGARADIETVKLAICSAVDVMQAMG 565

Query: 185 DGIYSVLSKMEGLSHLIXXXXXXXXXXXXILYECEDLLALTLAMQVKE 328
             I ++LS++E ++ L+             L ECE LLA T AMQV+E
Sbjct: 566 SSICALLSRVEEMNCLVSELADVAAQERAKLDECEALLASTAAMQVEE 613


>emb|CBI36553.3| unnamed protein product [Vitis vinifera]
          Length = 285

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/108 (52%), Positives = 74/108 (68%)
 Frame = +2

Query: 5   MSFLDEWFLLERDHVNSLSGAVDALEACTIRLPVIGGARVDVHKVKDAISSAIDVMQAAC 184
           M++LD+W L+ERDH NSLSGA++ LEA T+RLPV GGAR D+  VK AI SA+DVMQA  
Sbjct: 150 MAYLDDWALIERDHSNSLSGAIEDLEASTLRLPVTGGARADIETVKLAICSAVDVMQAMG 209

Query: 185 DGIYSVLSKMEGLSHLIXXXXXXXXXXXXILYECEDLLALTLAMQVKE 328
             I ++LS++E ++ L+             L ECE LLA T AMQV+E
Sbjct: 210 SSICALLSRVEEMNCLVSELADVAAQERAKLDECEALLASTAAMQVEE 257


>emb|CAN67151.1| hypothetical protein VITISV_019728 [Vitis vinifera]
          Length = 610

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/108 (52%), Positives = 74/108 (68%)
 Frame = +2

Query: 5   MSFLDEWFLLERDHVNSLSGAVDALEACTIRLPVIGGARVDVHKVKDAISSAIDVMQAAC 184
           M++LD+W L+ERDH NSLSGA++ LEA T+RLPV GGAR D+  VK AI SA+DVMQA  
Sbjct: 475 MAYLDDWALIERDHSNSLSGAIEDLEASTLRLPVTGGARADIETVKLAICSAVDVMQAMG 534

Query: 185 DGIYSVLSKMEGLSHLIXXXXXXXXXXXXILYECEDLLALTLAMQVKE 328
             I ++LS++E ++ L+             L ECE LLA T AMQV+E
Sbjct: 535 SSICALLSRVEEMNCLVSELADVAAQERAKLDECEALLASTAAMQVEE 582


Top