BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001579
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chlor...   252   3e-65
emb|CBI30132.3| unnamed protein product [Vitis vinifera]              251   3e-65
ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplast...   251   3e-65
ref|NP_850762.1| DNA gyrase subunit B [Arabidopsis thaliana] gi|...   249   2e-64
ref|NP_568133.1| DNA gyrase subunit B [Arabidopsis thaliana] gi|...   249   2e-64

>sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
           Flags: Precursor gi|38017095|gb|AAR07943.1| DNA gyrase B
           subunit [Nicotiana benthamiana]
          Length = 731

 Score =  252 bits (643), Expect = 3e-65
 Identities = 126/171 (73%), Positives = 135/171 (78%)
 Frame = -1

Query: 521 SEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVTLHADN 342
           SEQIQVLEGLDPVRKRPGMYIGSTG RGLHHLVYEILDNA+DEAQAGFA+K+DV LHADN
Sbjct: 92  SEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFATKIDVVLHADN 151

Query: 341 SVSISDNGRGIPTELHPATKKSSLETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXVNA 162
           SVSI+DNGRGIPTELHP TKKSSLETVLTVLHA                        VNA
Sbjct: 152 SVSIADNGRGIPTELHPVTKKSSLETVLTVLHAGGKFGGSSSGYNVSGGLHGVGLSVVNA 211

Query: 161 LSEALEVTVWRDGMEYQQKYSRGKPVTALTCHVLPAELSAARGTKIRFWPD 9
           LS+ALEVT+WRDG EYQQKYSRGKP+T L CH LP E+   +GT IRFWPD
Sbjct: 212 LSQALEVTIWRDGKEYQQKYSRGKPITTLICHDLPVEMRDRQGTAIRFWPD 262


>emb|CBI30132.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  251 bits (642), Expect = 3e-65
 Identities = 132/171 (77%), Positives = 137/171 (80%)
 Frame = -1

Query: 521 SEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVTLHADN 342
           SEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDV L AD+
Sbjct: 68  SEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVVLLADD 127

Query: 341 SVSISDNGRGIPTELHPATKKSSLETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXVNA 162
           SVSI+DNGRGIPTELHP TKKSSLETVLTVLHA                        VNA
Sbjct: 128 SVSITDNGRGIPTELHPVTKKSSLETVLTVLHAGGKFGGASSGYSVSGGLHGVGLSVVNA 187

Query: 161 LSEALEVTVWRDGMEYQQKYSRGKPVTALTCHVLPAELSAARGTKIRFWPD 9
           LSEALEVTVWRDGMEYQQKYSRGKPVT+LT  VLP E +  +GT IRFWPD
Sbjct: 188 LSEALEVTVWRDGMEYQQKYSRGKPVTSLTHRVLPTESTDLQGTHIRFWPD 238


>ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Vitis vinifera]
          Length = 719

 Score =  251 bits (642), Expect = 3e-65
 Identities = 132/171 (77%), Positives = 137/171 (80%)
 Frame = -1

Query: 521 SEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVTLHADN 342
           SEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDV L AD+
Sbjct: 80  SEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVVLLADD 139

Query: 341 SVSISDNGRGIPTELHPATKKSSLETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXVNA 162
           SVSI+DNGRGIPTELHP TKKSSLETVLTVLHA                        VNA
Sbjct: 140 SVSITDNGRGIPTELHPVTKKSSLETVLTVLHAGGKFGGASSGYSVSGGLHGVGLSVVNA 199

Query: 161 LSEALEVTVWRDGMEYQQKYSRGKPVTALTCHVLPAELSAARGTKIRFWPD 9
           LSEALEVTVWRDGMEYQQKYSRGKPVT+LT  VLP E +  +GT IRFWPD
Sbjct: 200 LSEALEVTVWRDGMEYQQKYSRGKPVTSLTHRVLPTESTDLQGTHIRFWPD 250


>ref|NP_850762.1| DNA gyrase subunit B [Arabidopsis thaliana]
           gi|332003318|gb|AED90701.1| DNA gyrase subunit B
           [Arabidopsis thaliana]
          Length = 519

 Score =  249 bits (635), Expect = 2e-64
 Identities = 126/171 (73%), Positives = 134/171 (78%)
 Frame = -1

Query: 521 SEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVTLHADN 342
           SEQIQVLEGLDPVRKRPGMYIGSTG RGLHHLVYEILDNAIDEAQAG+ASKVDV LHAD 
Sbjct: 93  SEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADG 152

Query: 341 SVSISDNGRGIPTELHPATKKSSLETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXVNA 162
           SVS+ DNGRGIPT+LHPATKKSSLETVLTVLHA                        VNA
Sbjct: 153 SVSVVDNGRGIPTDLHPATKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNA 212

Query: 161 LSEALEVTVWRDGMEYQQKYSRGKPVTALTCHVLPAELSAARGTKIRFWPD 9
           LSEALEV+VWRDGME++Q YSRGKP+T LTC VLP E    +GT IRFWPD
Sbjct: 213 LSEALEVSVWRDGMEHKQNYSRGKPITTLTCRVLPLESKGTKGTSIRFWPD 263


>ref|NP_568133.1| DNA gyrase subunit B [Arabidopsis thaliana]
           gi|75165162|sp|Q94BZ7.1|GYRBM_ARATH RecName: Full=DNA
           gyrase subunit B, mitochondrial; Flags: Precursor
           gi|14517374|gb|AAK62578.1| AT3g10270/F14P13_13
           [Arabidopsis thaliana] gi|22655426|gb|AAM98305.1|
           At3g10270/F14P13_13 [Arabidopsis thaliana]
           gi|332003319|gb|AED90702.1| DNA gyrase subunit B
           [Arabidopsis thaliana]
          Length = 732

 Score =  249 bits (635), Expect = 2e-64
 Identities = 126/171 (73%), Positives = 134/171 (78%)
 Frame = -1

Query: 521 SEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVTLHADN 342
           SEQIQVLEGLDPVRKRPGMYIGSTG RGLHHLVYEILDNAIDEAQAG+ASKVDV LHAD 
Sbjct: 93  SEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVYEILDNAIDEAQAGYASKVDVVLHADG 152

Query: 341 SVSISDNGRGIPTELHPATKKSSLETVLTVLHAXXXXXXXXXXXXXXXXXXXXXXXXVNA 162
           SVS+ DNGRGIPT+LHPATKKSSLETVLTVLHA                        VNA
Sbjct: 153 SVSVVDNGRGIPTDLHPATKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNA 212

Query: 161 LSEALEVTVWRDGMEYQQKYSRGKPVTALTCHVLPAELSAARGTKIRFWPD 9
           LSEALEV+VWRDGME++Q YSRGKP+T LTC VLP E    +GT IRFWPD
Sbjct: 213 LSEALEVSVWRDGMEHKQNYSRGKPITTLTCRVLPLESKGTKGTSIRFWPD 263