BLASTX nr result

ID: Coptis23_contig00001578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001578
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161589.1| PREDICTED: uncharacterized Rho GTPase-activa...    75   7e-12
ref|XP_004146905.1| PREDICTED: uncharacterized Rho GTPase-activa...    75   7e-12
ref|XP_002510992.1| Rho GTPase activator, putative [Ricinus comm...    74   1e-11
ref|XP_002328831.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
tpg|DAA62725.1| TPA: hypothetical protein ZEAMMB73_696766 [Zea m...    72   4e-11

>ref|XP_004161589.1| PREDICTED: uncharacterized Rho GTPase-activating protein
           At5g61530-like [Cucumis sativus]
          Length = 374

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = -1

Query: 310 IPLDDGMPTDFSAIEVVQCLIEHHNAIFTDANETVWR 200
           IPLDDG+P DF+A+EVVQCLIEHHN IFTDANET+WR
Sbjct: 338 IPLDDGVPVDFNAVEVVQCLIEHHNEIFTDANETIWR 374


>ref|XP_004146905.1| PREDICTED: uncharacterized Rho GTPase-activating protein
           At5g61530-like [Cucumis sativus]
          Length = 383

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = -1

Query: 310 IPLDDGMPTDFSAIEVVQCLIEHHNAIFTDANETVWR 200
           IPLDDG+P DF+A+EVVQCLIEHHN IFTDANET+WR
Sbjct: 347 IPLDDGVPVDFNAVEVVQCLIEHHNEIFTDANETIWR 383


>ref|XP_002510992.1| Rho GTPase activator, putative [Ricinus communis]
           gi|223550107|gb|EEF51594.1| Rho GTPase activator,
           putative [Ricinus communis]
          Length = 369

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = -1

Query: 313 AIPLDDGMPTDFSAIEVVQCLIEHHNAIFTDANETVWR 200
           AIPLDDG P DF AIEV+QCLIE HNAIFTDANETVWR
Sbjct: 332 AIPLDDGTPMDFGAIEVIQCLIEQHNAIFTDANETVWR 369


>ref|XP_002328831.1| predicted protein [Populus trichocarpa] gi|222839129|gb|EEE77480.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/37 (86%), Positives = 34/37 (91%)
 Frame = -1

Query: 310 IPLDDGMPTDFSAIEVVQCLIEHHNAIFTDANETVWR 200
           IPLDD MPTDF AI++VQCLIE HNAIFTDANETVWR
Sbjct: 341 IPLDDAMPTDFGAIDIVQCLIEQHNAIFTDANETVWR 377


>tpg|DAA62725.1| TPA: hypothetical protein ZEAMMB73_696766 [Zea mays]
          Length = 347

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = -1

Query: 310 IPLDDGMPTDFSAIEVVQCLIEHHNAIFTDANETVWR 200
           IPLDD  P D+S+IEV+QCLIEHHNAIFTDANETVWR
Sbjct: 311 IPLDDASPPDYSSIEVIQCLIEHHNAIFTDANETVWR 347


Top