BLASTX nr result

ID: Coptis23_contig00001570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001570
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC10953.1| ubiquitin-like protein [Camellia sinensis]             150   5e-34
gb|AFK38458.1| unknown [Lotus japonicus]                              150   6e-34
ref|XP_002863802.1| ubiquitin family protein [Arabidopsis lyrata...   149   8e-34
gb|ABK21506.1| unknown [Picea sitchensis] gi|116782268|gb|ABK224...   149   1e-33
ref|XP_002877389.1| hypothetical protein ARALYDRAFT_905666 [Arab...   149   1e-33

>gb|AEC10953.1| ubiquitin-like protein [Camellia sinensis]
          Length = 73

 Score =  150 bits (379), Expect = 5e-34
 Identities = 71/73 (97%), Positives = 73/73 (100%)
 Frame = +3

Query: 81  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNVYKDHITLQDY 260
           MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRADKIRIQKWYNVYKDHITL+DY
Sbjct: 1   MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRADKIRIQKWYNVYKDHITLKDY 60

Query: 261 EIHDGMGLELYYN 299
           EIHDGMGLELYYN
Sbjct: 61  EIHDGMGLELYYN 73


>gb|AFK38458.1| unknown [Lotus japonicus]
          Length = 73

 Score =  150 bits (378), Expect = 6e-34
 Identities = 70/73 (95%), Positives = 73/73 (100%)
 Frame = +3

Query: 81  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNVYKDHITLQDY 260
           MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRADKIRIQKWYN+YKDHITL+DY
Sbjct: 1   MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLRDY 60

Query: 261 EIHDGMGLELYYN 299
           EIHDGMGLELYYN
Sbjct: 61  EIHDGMGLELYYN 73


>ref|XP_002863802.1| ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309637|gb|EFH40061.1| ubiquitin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 73

 Score =  149 bits (377), Expect = 8e-34
 Identities = 70/73 (95%), Positives = 73/73 (100%)
 Frame = +3

Query: 81  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNVYKDHITLQDY 260
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYN+YKDHITL+DY
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 261 EIHDGMGLELYYN 299
           EIHDGMGLELYYN
Sbjct: 61  EIHDGMGLELYYN 73


>gb|ABK21506.1| unknown [Picea sitchensis] gi|116782268|gb|ABK22439.1| unknown
           [Picea sitchensis] gi|148906590|gb|ABR16447.1| unknown
           [Picea sitchensis]
          Length = 73

 Score =  149 bits (376), Expect = 1e-33
 Identities = 70/73 (95%), Positives = 72/73 (98%)
 Frame = +3

Query: 81  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNVYKDHITLQDY 260
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR DKIRIQKWYN+YKDHITL+DY
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPDKIRIQKWYNIYKDHITLKDY 60

Query: 261 EIHDGMGLELYYN 299
           EIHDGMGLELYYN
Sbjct: 61  EIHDGMGLELYYN 73


>ref|XP_002877389.1| hypothetical protein ARALYDRAFT_905666 [Arabidopsis lyrata subsp.
           lyrata] gi|297323227|gb|EFH53648.1| hypothetical protein
           ARALYDRAFT_905666 [Arabidopsis lyrata subsp. lyrata]
          Length = 73

 Score =  149 bits (375), Expect = 1e-33
 Identities = 70/73 (95%), Positives = 71/73 (97%)
 Frame = +3

Query: 81  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNVYKDHITLQDY 260
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR DKIRIQKWYN+YKDHITL DY
Sbjct: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPDKIRIQKWYNIYKDHITLNDY 60

Query: 261 EIHDGMGLELYYN 299
           EIHDGMGLELYYN
Sbjct: 61  EIHDGMGLELYYN 73


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