BLASTX nr result

ID: Coptis23_contig00001560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001560
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519402.1| PREDICTED: clathrin heavy chain 1-like [Glyc...   401   e-109
ref|XP_003616661.1| Clathrin heavy chain [Medicago truncatula] g...   397   e-108
ref|XP_003544075.1| PREDICTED: clathrin heavy chain 1-like [Glyc...   397   e-108
ref|XP_002276855.1| PREDICTED: clathrin heavy chain 2 [Vitis vin...   396   e-108
ref|XP_002528311.1| clathrin heavy chain, putative [Ricinus comm...   396   e-108

>ref|XP_003519402.1| PREDICTED: clathrin heavy chain 1-like [Glycine max]
          Length = 1707

 Score =  401 bits (1030), Expect = e-109
 Identities = 197/212 (92%), Positives = 205/212 (96%)
 Frame = +1

Query: 145 MAAANAPITMKEALTLPSIGINPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ 324
           MAAANAPITMKEALTLPSIGIN QFITFTHVTMESDKYICVRET+PQNSVVIIDM+MPNQ
Sbjct: 1   MAAANAPITMKEALTLPSIGINSQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPNQ 60

Query: 325 PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKTKMKSHQMPEQIVFWKWI 504
           PLRRPITADSALMNPNSRILALKAQL GTTQDHLQIFNIEMK KMKS+QMPEQ+VFWKWI
Sbjct: 61  PLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKWI 120

Query: 505 SPKMLGLVTQTSVYHWSIEGESEPAKMFDRTANLASNQIINYRCDPAEKWLVLIGIAPGS 684
           SPKMLGLVTQTSVYHWSIEG+SEP KMF+RTANLA+NQIINYRCDP EKWLVLIGIAPGS
Sbjct: 121 SPKMLGLVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPTEKWLVLIGIAPGS 180

Query: 685 AERPQLVKGNMQLFSVDQQRSQALEAHGAAFA 780
            ERPQLVKGNMQLFSVDQQRSQALEAH A+FA
Sbjct: 181 PERPQLVKGNMQLFSVDQQRSQALEAHAASFA 212


>ref|XP_003616661.1| Clathrin heavy chain [Medicago truncatula]
           gi|355517996|gb|AES99619.1| Clathrin heavy chain
           [Medicago truncatula]
          Length = 1706

 Score =  397 bits (1021), Expect = e-108
 Identities = 194/212 (91%), Positives = 203/212 (95%)
 Frame = +1

Query: 145 MAAANAPITMKEALTLPSIGINPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ 324
           MAAANAPI MKE LTLPS+GIN QFITFTHVTMESDKYICVRETSPQNSVVI+DMSMPNQ
Sbjct: 1   MAAANAPIAMKEVLTLPSVGINAQFITFTHVTMESDKYICVRETSPQNSVVIVDMSMPNQ 60

Query: 325 PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKTKMKSHQMPEQIVFWKWI 504
           PLRRPITADSALMNPNSRILALKAQL GTTQDHLQIFNIE+KTKMKSHQMPEQ+VFWKWI
Sbjct: 61  PLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIELKTKMKSHQMPEQVVFWKWI 120

Query: 505 SPKMLGLVTQTSVYHWSIEGESEPAKMFDRTANLASNQIINYRCDPAEKWLVLIGIAPGS 684
           SPKMLGLVTQTSVYHWSIEG+SEP K+F+RTANLA+NQIINYRCDP EKWLVLIGIAPGS
Sbjct: 121 SPKMLGLVTQTSVYHWSIEGDSEPVKVFERTANLANNQIINYRCDPTEKWLVLIGIAPGS 180

Query: 685 AERPQLVKGNMQLFSVDQQRSQALEAHGAAFA 780
            ER QLVKGNMQLFSVDQQRSQALEAH A+FA
Sbjct: 181 PERAQLVKGNMQLFSVDQQRSQALEAHAASFA 212


>ref|XP_003544075.1| PREDICTED: clathrin heavy chain 1-like [Glycine max]
          Length = 1700

 Score =  397 bits (1019), Expect = e-108
 Identities = 195/212 (91%), Positives = 204/212 (96%)
 Frame = +1

Query: 145 MAAANAPITMKEALTLPSIGINPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ 324
           MAAANAPITMKEALTLPSIGIN QFITFTHVTMESDKYICVRET+PQNSVVIIDM+MPNQ
Sbjct: 1   MAAANAPITMKEALTLPSIGINSQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPNQ 60

Query: 325 PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKTKMKSHQMPEQIVFWKWI 504
           PLRRPITADSALMNPNSRILALKAQL GTTQDHLQIFNIEMK KMKS+QMPEQ+VFWKWI
Sbjct: 61  PLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKWI 120

Query: 505 SPKMLGLVTQTSVYHWSIEGESEPAKMFDRTANLASNQIINYRCDPAEKWLVLIGIAPGS 684
           SPKMLGLVTQTSVYHWSIEG+SEP KMF+RTANLA+NQIINYRCDP EKWLVLIGIAPG+
Sbjct: 121 SPKMLGLVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPTEKWLVLIGIAPGA 180

Query: 685 AERPQLVKGNMQLFSVDQQRSQALEAHGAAFA 780
            ER QLVKGNMQLFSVDQQRSQALEAH A+FA
Sbjct: 181 PERAQLVKGNMQLFSVDQQRSQALEAHAASFA 212


>ref|XP_002276855.1| PREDICTED: clathrin heavy chain 2 [Vitis vinifera]
           gi|297745873|emb|CBI15929.3| unnamed protein product
           [Vitis vinifera]
          Length = 1705

 Score =  396 bits (1017), Expect = e-108
 Identities = 193/212 (91%), Positives = 205/212 (96%)
 Frame = +1

Query: 145 MAAANAPITMKEALTLPSIGINPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ 324
           MAAANAPI+MKEALTL SIGI+PQF+TFTHVTMESDKYICVRET+PQNSVVIIDMSMP Q
Sbjct: 1   MAAANAPISMKEALTLSSIGISPQFMTFTHVTMESDKYICVRETAPQNSVVIIDMSMPMQ 60

Query: 325 PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKTKMKSHQMPEQIVFWKWI 504
           PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMK KMKSHQMPEQ+VFWKWI
Sbjct: 61  PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQVVFWKWI 120

Query: 505 SPKMLGLVTQTSVYHWSIEGESEPAKMFDRTANLASNQIINYRCDPAEKWLVLIGIAPGS 684
           +PKMLGLVTQTSV+HWSIEG+SEP KMF+RTANL +NQIINYRCDP+EKWLVLIGIAPGS
Sbjct: 121 TPKMLGLVTQTSVFHWSIEGDSEPVKMFERTANLVNNQIINYRCDPSEKWLVLIGIAPGS 180

Query: 685 AERPQLVKGNMQLFSVDQQRSQALEAHGAAFA 780
            ERPQLVKGNMQLFSVDQQRSQALEAH A+FA
Sbjct: 181 PERPQLVKGNMQLFSVDQQRSQALEAHAASFA 212


>ref|XP_002528311.1| clathrin heavy chain, putative [Ricinus communis]
           gi|223532266|gb|EEF34069.1| clathrin heavy chain,
           putative [Ricinus communis]
          Length = 1705

 Score =  396 bits (1017), Expect = e-108
 Identities = 194/212 (91%), Positives = 204/212 (96%)
 Frame = +1

Query: 145 MAAANAPITMKEALTLPSIGINPQFITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ 324
           MAAANAPITMKE LTLP+IGI+PQFITFT+VTMESDKYICVRET+PQNSVVIIDM+MP Q
Sbjct: 1   MAAANAPITMKEVLTLPTIGISPQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ 60

Query: 325 PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKTKMKSHQMPEQIVFWKWI 504
           PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMK KMKSHQMPEQ+VFWKWI
Sbjct: 61  PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQVVFWKWI 120

Query: 505 SPKMLGLVTQTSVYHWSIEGESEPAKMFDRTANLASNQIINYRCDPAEKWLVLIGIAPGS 684
           SPKMLGLVTQTSVYHWSIEG+SEP KMF+RTANL +NQIINYRCDP+EKWLVLIGIAPGS
Sbjct: 121 SPKMLGLVTQTSVYHWSIEGDSEPVKMFERTANLVNNQIINYRCDPSEKWLVLIGIAPGS 180

Query: 685 AERPQLVKGNMQLFSVDQQRSQALEAHGAAFA 780
            ER QLVKGNMQLFSVDQQRSQALEAH AAFA
Sbjct: 181 PERQQLVKGNMQLFSVDQQRSQALEAHAAAFA 212


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