BLASTX nr result

ID: Coptis23_contig00001550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001550
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521154.1| conserved hypothetical protein [Ricinus comm...    74   2e-14
ref|XP_003542451.1| PREDICTED: uncharacterized protein LOC100801...    74   3e-14
ref|XP_003521327.1| PREDICTED: uncharacterized protein LOC100796...    70   1e-12
ref|XP_003537153.1| PREDICTED: uncharacterized protein LOC100775...    69   3e-12
emb|CBI37242.3| unnamed protein product [Vitis vinifera]               76   3e-12

>ref|XP_002521154.1| conserved hypothetical protein [Ricinus communis]
           gi|223539723|gb|EEF41305.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1384

 Score = 74.3 bits (181), Expect(2) = 2e-14
 Identities = 43/118 (36%), Positives = 56/118 (47%), Gaps = 26/118 (22%)
 Frame = -1

Query: 415 GVDTPSARDPPFPLAVPSSSHLMDSVLADSTAXXXXXXXXXXXXXXSTE----------- 269
           GVD PS+RDPPFP  VP+S+HL  S+  +ST                ++           
Sbjct: 555 GVDPPSSRDPPFPATVPASNHLTSSLSLESTTTSISKGSNRNGGLVLSDIITQIQASKDS 614

Query: 268 ---------------PFSSYTAKRTFERLHDGSHIEENTDMRINGHYLNTHMDRQYLD 140
                           FSSYTAKR  ERLH+ S  EEN D+R    + ++H DRQY+D
Sbjct: 615 AKLSYQSTAAAESLPAFSSYTAKRASERLHERSSFEENNDIREARRFAHSHTDRQYID 672



 Score = 28.9 bits (63), Expect(2) = 2e-14
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -2

Query: 138 PYKDPCLRDSQNNFIPNF 85
           PYKD   RDS N+ IPNF
Sbjct: 674 PYKDVNYRDSHNSHIPNF 691


>ref|XP_003542451.1| PREDICTED: uncharacterized protein LOC100801377 [Glycine max]
          Length = 1428

 Score = 73.6 bits (179), Expect(2) = 3e-14
 Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 26/119 (21%)
 Frame = -1

Query: 415 GVDTPSARDPPFPLAVPSSSHLMDSVLADSTAXXXXXXXXXXXXXXSTE----------- 269
           GVD PS+RDPPFP AV +S+HL  S+ A+STA               ++           
Sbjct: 617 GVDPPSSRDPPFPAAVTASNHLTSSLTAESTAAGANKASNRHGGLGLSDIITQIQASKDS 676

Query: 268 ---------------PFSSYTAKRTFERLHDGSHIEENTDMRINGHYLNTHMDRQYLDT 137
                           FSS+++KR  E+L +   I+EN+DMR    Y+N ++DRQY+DT
Sbjct: 677 GRLSYNTNVGIEPLSAFSSFSSKRATEKLQERGSIDENSDMRETRRYMNPNIDRQYMDT 735



 Score = 29.3 bits (64), Expect(2) = 3e-14
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -2

Query: 141 TPYKDPCLRDSQNNFIPNF 85
           T Y+D   RDSQN+++PNF
Sbjct: 735 THYRDGNYRDSQNSYVPNF 753


>ref|XP_003521327.1| PREDICTED: uncharacterized protein LOC100796697 [Glycine max]
          Length = 1440

 Score = 69.7 bits (169), Expect(2) = 1e-12
 Identities = 42/115 (36%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
 Frame = -1

Query: 415 GVDTPSARDPPFPLAVPSSSHLMDSVLADSTAXXXXXXXXXXXXXXST------------ 272
           GVD PS+RDPPFP AVP+S+HL  S+  +ST                +            
Sbjct: 617 GVDPPSSRDPPFPAAVPASNHLTSSLTTESTTSGINKGSNRNGGLGLSDIITQIQASKDS 676

Query: 271 -----------EPFSSYTAKRTFERLHDGSHIEENTDMRINGHYLNTHMDRQYLD 140
                      EP SSY++KR  ER  + S +++N DMR    Y+N + DRQYLD
Sbjct: 677 AKLSYRSNVGIEPLSSYSSKRASER-QERSSLDDNHDMRETRRYMNPNTDRQYLD 730



 Score = 27.7 bits (60), Expect(2) = 1e-12
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 138 PYKDPCLRDSQNNFIPNF 85
           PY+D   R+S N+++PNF
Sbjct: 732 PYRDGNFRESHNSYVPNF 749


>ref|XP_003537153.1| PREDICTED: uncharacterized protein LOC100775793 [Glycine max]
          Length = 1436

 Score = 68.9 bits (167), Expect(2) = 3e-12
 Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
 Frame = -1

Query: 415 GVDTPSARDPPFPLAVPSSSHLMDSVLADSTAXXXXXXXXXXXXXXSTE----------- 269
           GVD PS+RDPPFP AV +S+HL  S+  +STA               ++           
Sbjct: 617 GVDPPSSRDPPFPAAVTASNHLTSSLTTESTASGANKASNRNGGLGMSDIITQIQASKDS 676

Query: 268 ---------------PFSSYTAKRTFERLHDGSHIEENTDMRINGHYLNTHMDRQYLDT 137
                           FSSY++KR  E+L +   I+EN+DMR    Y+N ++DRQ +DT
Sbjct: 677 GRLSHNTNVGIEPLSTFSSYSSKRVTEKLQERGSIDENSDMRETRCYMNPNIDRQCMDT 735



 Score = 27.3 bits (59), Expect(2) = 3e-12
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -2

Query: 141 TPYKDPCLRDSQNNFIPNF 85
           T Y+D   RDSQ++++PNF
Sbjct: 735 THYRDGNYRDSQHSYVPNF 753


>emb|CBI37242.3| unnamed protein product [Vitis vinifera]
          Length = 530

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/93 (43%), Positives = 55/93 (59%)
 Frame = -1

Query: 415 GVDTPSARDPPFPLAVPSSSHLMDSVLADSTAXXXXXXXXXXXXXXSTEPFSSYTAKRTF 236
           GVD PS+RDPPFPLAVP+S+ L ++ + +S A                  FSSY+AKR  
Sbjct: 431 GVDPPSSRDPPFPLAVPASNQLTNTSMVESNASSIVKGT-----------FSSYSAKRVS 479

Query: 235 ERLHDGSHIEENTDMRINGHYLNTHMDRQYLDT 137
           ERL +   +E+N+++R    Y+N   DRQY DT
Sbjct: 480 ERLQERGSLEDNSEIREARRYMNQQSDRQYSDT 512


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