BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001548
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containi...   254   1e-65
ref|XP_004144175.1| PREDICTED: pentatricopeptide repeat-containi...   239   4e-61
ref|XP_002512090.1| pentatricopeptide repeat-containing protein,...   234   7e-60
ref|NP_001060186.1| Os07g0599000 [Oryza sativa Japonica Group] g...   233   3e-59
gb|EAZ40545.1| hypothetical protein OsJ_25000 [Oryza sativa Japo...   233   3e-59

>ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Vitis vinifera]
           gi|297738080|emb|CBI27281.3| unnamed protein product
           [Vitis vinifera]
          Length = 616

 Score =  254 bits (648), Expect = 1e-65
 Identities = 121/172 (70%), Positives = 147/172 (85%)
 Frame = +3

Query: 3   QLETLSQADPPHKSVAALNCILLGCANIWDLNRAYETFVAFSKNFGLTPDIHSYNALMYA 182
           QLE LS+ADPP+KSVAALNC++LGCANIWDL+RAY+TF A   +FGLTPDIHSYNALMYA
Sbjct: 444 QLENLSRADPPYKSVAALNCVILGCANIWDLDRAYQTFEAIGSSFGLTPDIHSYNALMYA 503

Query: 183 YGKLKKIDEASSVFDHLTSMGVKPNATTYALLVDAHVTNLDAKAALSVIDEEVKVGFKPS 362
           +GKLKK  EAS VF+HLTS+G+KPNA +++LLVDAH+ N D KAALSVI+E +  GF PS
Sbjct: 504 FGKLKKTFEASRVFEHLTSLGIKPNAMSFSLLVDAHLINRDQKAALSVIEEMINAGFAPS 563

Query: 363 KDMLQKVRRRSIREFDYESFDRVEELARTFKIRMGSDNRKGMLFDLQYSMNY 518
           K++L+KVRRR IRE DYES D+VE LAR FKIRMG++NR+ MLF+L Y+  Y
Sbjct: 564 KEILKKVRRRCIREMDYESNDQVESLARKFKIRMGTENRRDMLFNLAYNTEY 615


>ref|XP_004144175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Cucumis sativus]
           gi|449489211|ref|XP_004158247.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  239 bits (609), Expect = 4e-61
 Identities = 112/172 (65%), Positives = 142/172 (82%)
 Frame = +3

Query: 3   QLETLSQADPPHKSVAALNCILLGCANIWDLNRAYETFVAFSKNFGLTPDIHSYNALMYA 182
           QLE LS+ADPP+KSVAALNC++LGCANIWDL+RAY+TF A   +FGLTP+IHSYNALMYA
Sbjct: 445 QLENLSRADPPYKSVAALNCVILGCANIWDLDRAYQTFEAIGSSFGLTPNIHSYNALMYA 504

Query: 183 YGKLKKIDEASSVFDHLTSMGVKPNATTYALLVDAHVTNLDAKAALSVIDEEVKVGFKPS 362
           +G+LKK  EA+ VF+HL  +G+KPNAT+Y+LL DAH+ N D K+AL+ ID  V  GF PS
Sbjct: 505 FGRLKKTFEAARVFEHLVGLGIKPNATSYSLLADAHLINRDPKSALAAIDNMVTAGFAPS 564

Query: 363 KDMLQKVRRRSIREFDYESFDRVEELARTFKIRMGSDNRKGMLFDLQYSMNY 518
           K++L+KVRRR IRE DY+S D+V  LA+ FKIRMGS++R+ +LF+L Y  NY
Sbjct: 565 KELLKKVRRRCIREQDYDSNDKVGNLAQNFKIRMGSESRRDILFNLNYGSNY 616


>ref|XP_002512090.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549270|gb|EEF50759.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  234 bits (598), Expect = 7e-60
 Identities = 111/172 (64%), Positives = 142/172 (82%)
 Frame = +3

Query: 3   QLETLSQADPPHKSVAALNCILLGCANIWDLNRAYETFVAFSKNFGLTPDIHSYNALMYA 182
           QLE LS+A+ P+KSVAALNCI+LGCANIWD++RAY+TF A   +F LTP+IHSYNAL+YA
Sbjct: 446 QLENLSRAERPYKSVAALNCIILGCANIWDIDRAYQTFEAIGSSFELTPNIHSYNALIYA 505

Query: 183 YGKLKKIDEASSVFDHLTSMGVKPNATTYALLVDAHVTNLDAKAALSVIDEEVKVGFKPS 362
           +G+LKK  EA+ VF+HL S+G+KPNATTY LLVDAH+ N D K ALSVI+E +  GF PS
Sbjct: 506 FGRLKKTFEAARVFEHLVSLGIKPNATTYLLLVDAHLINRDVKTALSVIEEMMSAGFTPS 565

Query: 363 KDMLQKVRRRSIREFDYESFDRVEELARTFKIRMGSDNRKGMLFDLQYSMNY 518
           K+ L+KVRRR +RE DY+S DRV  +A+  KIRMG++NR+ MLF+L+YS +Y
Sbjct: 566 KETLKKVRRRCVREMDYDSDDRVGSVAKNCKIRMGTENRRDMLFNLEYSTDY 617


>ref|NP_001060186.1| Os07g0599000 [Oryza sativa Japonica Group]
           gi|33354185|dbj|BAC81166.1| pentatricopeptide (PPR)
           repeat-containing protein-like protein [Oryza sativa
           Japonica Group] gi|113611722|dbj|BAF22100.1|
           Os07g0599000 [Oryza sativa Japonica Group]
          Length = 623

 Score =  233 bits (593), Expect = 3e-59
 Identities = 111/172 (64%), Positives = 137/172 (79%)
 Frame = +3

Query: 3   QLETLSQADPPHKSVAALNCILLGCANIWDLNRAYETFVAFSKNFGLTPDIHSYNALMYA 182
           QLE LS AD P+KSVAALNC++LGCANIWDL RAYETF A  + FGLTPDIHSYNAL++A
Sbjct: 445 QLENLSSADSPYKSVAALNCVILGCANIWDLERAYETFEAIKEKFGLTPDIHSYNALLHA 504

Query: 183 YGKLKKIDEASSVFDHLTSMGVKPNATTYALLVDAHVTNLDAKAALSVIDEEVKVGFKPS 362
           +GK KK +EA +VF HL S+GVKPNATTY LLVD H+ N DAKAAL+VI E V  GF PS
Sbjct: 505 FGKRKKTEEACNVFQHLVSLGVKPNATTYGLLVDTHLVNRDAKAALAVIAEMVDAGFTPS 564

Query: 363 KDMLQKVRRRSIREFDYESFDRVEELARTFKIRMGSDNRKGMLFDLQYSMNY 518
           K+ L+KVRRR  RE D++S ++V+ LA+ F  RMG +NR+ MLF+++YS  +
Sbjct: 565 KETLKKVRRRCSRESDFDSDEKVQSLAKQFNYRMGGENRREMLFNIEYSAEF 616


>gb|EAZ40545.1| hypothetical protein OsJ_25000 [Oryza sativa Japonica Group]
          Length = 629

 Score =  233 bits (593), Expect = 3e-59
 Identities = 111/172 (64%), Positives = 137/172 (79%)
 Frame = +3

Query: 3   QLETLSQADPPHKSVAALNCILLGCANIWDLNRAYETFVAFSKNFGLTPDIHSYNALMYA 182
           QLE LS AD P+KSVAALNC++LGCANIWDL RAYETF A  + FGLTPDIHSYNAL++A
Sbjct: 445 QLENLSSADSPYKSVAALNCVILGCANIWDLERAYETFEAIKEKFGLTPDIHSYNALLHA 504

Query: 183 YGKLKKIDEASSVFDHLTSMGVKPNATTYALLVDAHVTNLDAKAALSVIDEEVKVGFKPS 362
           +GK KK +EA +VF HL S+GVKPNATTY LLVD H+ N DAKAAL+VI E V  GF PS
Sbjct: 505 FGKRKKTEEACNVFQHLVSLGVKPNATTYGLLVDTHLVNRDAKAALAVIAEMVDAGFTPS 564

Query: 363 KDMLQKVRRRSIREFDYESFDRVEELARTFKIRMGSDNRKGMLFDLQYSMNY 518
           K+ L+KVRRR  RE D++S ++V+ LA+ F  RMG +NR+ MLF+++YS  +
Sbjct: 565 KETLKKVRRRCSRESDFDSDEKVQSLAKQFNYRMGGENRREMLFNIEYSAEF 616