BLASTX nr result

ID: Coptis23_contig00001545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001545
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316406.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002283136.1| PREDICTED: uncharacterized protein LOC100244...   127   9e-28
ref|XP_003520691.1| PREDICTED: uncharacterized protein LOC100794...   123   2e-26
ref|XP_003537061.1| PREDICTED: uncharacterized protein LOC100780...   122   2e-26
ref|XP_003542592.1| PREDICTED: uncharacterized protein LOC100786...   122   4e-26

>ref|XP_002316406.1| predicted protein [Populus trichocarpa] gi|222865446|gb|EEF02577.1|
           predicted protein [Populus trichocarpa]
          Length = 108

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/94 (67%), Positives = 71/94 (75%)
 Frame = +1

Query: 127 MADKISWHCIXXXXXXXXXSCCDSSETKSSLMMNQGMTNNRPCDEIYVVAEGETLHTISE 306
           MA+KISW+C          SCC+ SET+ S + +     N+PCDEIYVV EGETL+TISE
Sbjct: 1   MAEKISWYCALLMALMLVLSCCEVSETELSTVGHPRFFENKPCDEIYVVREGETLNTISE 60

Query: 307 KCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 408
           KC DPYIVEENPHIHDPDDVFPGLVIKITP I R
Sbjct: 61  KCGDPYIVEENPHIHDPDDVFPGLVIKITPLIDR 94


>ref|XP_002283136.1| PREDICTED: uncharacterized protein LOC100244252 [Vitis vinifera]
          Length = 104

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/107 (58%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
 Frame = +1

Query: 91  MARVFSSTIKATMADKISWHCIXXXXXXXXXSCCDSSETKSSLMMNQGMTN-NRPCDEIY 267
           MA + SST    +A+KISW+           SCC+S+++   +M+     +  +PCDEIY
Sbjct: 1   MAPISSST---ELAEKISWYSALLLALMLVLSCCESAQSHDEIMVRLHKKDAKKPCDEIY 57

Query: 268 VVAEGETLHTISEKCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 408
           VV EGETLHTISEKC DPYIVEENPHIHDPDDVFPGLVIKITP+  R
Sbjct: 58  VVREGETLHTISEKCGDPYIVEENPHIHDPDDVFPGLVIKITPYNYR 104


>ref|XP_003520691.1| PREDICTED: uncharacterized protein LOC100794241 [Glycine max]
          Length = 99

 Score =  123 bits (308), Expect = 2e-26
 Identities = 61/99 (61%), Positives = 70/99 (70%), Gaps = 5/99 (5%)
 Frame = +1

Query: 127 MADKISWHCIXXXXXXXXXSCCDSS--ETKSSLMMNQGMTNN---RPCDEIYVVAEGETL 291
           MA+KISW C+         SCC+SS  E +  ++M + + NN   + CDEIYVV EGETL
Sbjct: 1   MAEKISWCCVLFMAIILVLSCCESSTNEFRVQMLMQRNINNNNNKKACDEIYVVREGETL 60

Query: 292 HTISEKCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 408
            TISEKC DPYIVEENPHI DPDDVFPGLVIKI PF  R
Sbjct: 61  QTISEKCGDPYIVEENPHIQDPDDVFPGLVIKINPFTNR 99


>ref|XP_003537061.1| PREDICTED: uncharacterized protein LOC100780595 [Glycine max]
          Length = 206

 Score =  122 bits (307), Expect = 2e-26
 Identities = 62/103 (60%), Positives = 72/103 (69%), Gaps = 8/103 (7%)
 Frame = +1

Query: 124 TMADKISWHCIXXXXXXXXXSCCDS--SETKSSLMMNQGMT------NNRPCDEIYVVAE 279
           T+A+KISW+C          S C+S  S+  S +M++  +T      NN+ CDEIYVV E
Sbjct: 9   TLAEKISWNCSVFVALMLVLSSCESNTSDFTSQMMLHGSVTGNISNNNNKACDEIYVVRE 68

Query: 280 GETLHTISEKCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 408
           GETL TISEKC DPYIVEENPHIHDPDDVFPGLVIKI PF  R
Sbjct: 69  GETLQTISEKCGDPYIVEENPHIHDPDDVFPGLVIKINPFTNR 111


>ref|XP_003542592.1| PREDICTED: uncharacterized protein LOC100786697 [Glycine max]
          Length = 108

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/98 (61%), Positives = 71/98 (72%), Gaps = 4/98 (4%)
 Frame = +1

Query: 127 MADKISWHCIXXXXXXXXXSCCDS--SETKSSLMMNQGMTN--NRPCDEIYVVAEGETLH 294
           MA+KISW+C          S C+S  S+  + +M ++ ++N  N+ CDEIYVV EGETL 
Sbjct: 10  MAEKISWNCAVFVALMLVLSSCESNTSDFTTQMMFHESVSNSNNKACDEIYVVREGETLQ 69

Query: 295 TISEKCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 408
           TISEKC DPYIVEENPHIHDPDDVFPGLVIKI PF  R
Sbjct: 70  TISEKCGDPYIVEENPHIHDPDDVFPGLVIKINPFTNR 107


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