BLASTX nr result

ID: Coptis23_contig00001541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001541
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279746.2| PREDICTED: 1-aminocyclopropane-1-carboxylate...   433   e-119
emb|CBI27928.3| unnamed protein product [Vitis vinifera] gi|4084...   427   e-117
gb|AAX84675.1| ACC oxidase ACCO2 [Manihot esculenta]                  426   e-117
dbj|BAG15873.1| ACC oxidase [Bruguiera gymnorhiza]                    420   e-115
ref|XP_002514144.1| 1-aminocyclopropane-1-carboxylate oxidase, p...   419   e-115

>ref|XP_002279746.2| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 1 [Vitis
            vinifera]
          Length = 329

 Score =  433 bits (1113), Expect = e-119
 Identities = 218/338 (64%), Positives = 253/338 (74%), Gaps = 2/338 (0%)
 Frame = -3

Query: 1118 LSIAVYGSESAPLFQP--VRKKNMEIPVIDLEGLNGDLSNKTMDLLHQACEKWGFFKVSN 945
            +S+ +Y S+   LF    VRK+ ME+P+ID + L+G+   +T  LLHQACEKWGFF++ N
Sbjct: 2    VSVPIY-SQLIYLFSSSWVRKQEMEVPMIDFDKLDGEKRAETKALLHQACEKWGFFQIDN 60

Query: 944  HGIDVELMEKVKRLVNMHYEEYMKESFYGSDIVKGLQSKEAIREKDWESSFFIWHXXXXX 765
            HG+D +LMEKVK LVN HYEE MK SFY S+I K L+ KE     DWESSFF+WH     
Sbjct: 61   HGVDKKLMEKVKHLVNTHYEEIMKRSFYESEIAKALEDKETASNIDWESSFFLWHRPTSN 120

Query: 764  XXXXXXXXXXXXXXXXXXXXXXXXXXXEYINQVYKLAEKLSELMCENLGLEKDYIKKAFS 585
                                       EYI Q++KLAEKLSELMCENLGLEK YI++AFS
Sbjct: 121  IDEFTNISEDLRKTMD-----------EYIAQLFKLAEKLSELMCENLGLEKGYIREAFS 169

Query: 584  GPRGPSVGTKVAKYPRCPQPELVKGLRAHTDAGGIILLLQDDQVPGLEFFKDGKWVEIPP 405
            G  GPSVGTKVAKYP+CP+PELV+GLR HTDAGGIILLLQDDQVPGLEF+KDG+WV IPP
Sbjct: 170  GNAGPSVGTKVAKYPQCPRPELVRGLREHTDAGGIILLLQDDQVPGLEFYKDGEWVVIPP 229

Query: 404  STNNTIFINTGDQVEILSNGRYKSVLHRVMADENGSRLSIATFYNPVGDAIISPAPELLY 225
            S NNTIF+NTGDQ+E+LSNGRYKS LHRVMAD+NGSRLSIATFYNP GDAIISPAP+LLY
Sbjct: 230  SKNNTIFVNTGDQIEVLSNGRYKSTLHRVMADKNGSRLSIATFYNPSGDAIISPAPKLLY 289

Query: 224  PHSLSFQDYLKLYATTKFTDKSTRFKSLKKIAGGQAKL 111
            P    FQDYLKLYATTKF DK  RF+S+K +A G   L
Sbjct: 290  PDHFRFQDYLKLYATTKFADKGPRFESMKNMAIGHHSL 327


>emb|CBI27928.3| unnamed protein product [Vitis vinifera] gi|408451524|gb|AFU66006.1|
            1-aminocyclopropane-1-carboxylic acid oxidase 3 [Vitis
            vinifera]
          Length = 306

 Score =  427 bits (1097), Expect = e-117
 Identities = 210/315 (66%), Positives = 240/315 (76%)
 Frame = -3

Query: 1055 MEIPVIDLEGLNGDLSNKTMDLLHQACEKWGFFKVSNHGIDVELMEKVKRLVNMHYEEYM 876
            ME+P+ID + L+G+   +T  LLHQACEKWGFF++ NHG+D +LMEKVK LVN HYEE M
Sbjct: 1    MEVPMIDFDKLDGEKRAETKALLHQACEKWGFFQIDNHGVDKKLMEKVKHLVNTHYEEIM 60

Query: 875  KESFYGSDIVKGLQSKEAIREKDWESSFFIWHXXXXXXXXXXXXXXXXXXXXXXXXXXXX 696
            K SFY S+I K L+ KE     DWESSFF+WH                            
Sbjct: 61   KRSFYESEIAKALEDKETASNIDWESSFFLWHRPTSNIDEFTNISEDLRKTMD------- 113

Query: 695  XXXXEYINQVYKLAEKLSELMCENLGLEKDYIKKAFSGPRGPSVGTKVAKYPRCPQPELV 516
                EYI Q++KLAEKLSELMCENLGLEK YI++AFSG  GPSVGTKVAKYP+CP+PELV
Sbjct: 114  ----EYIAQLFKLAEKLSELMCENLGLEKGYIREAFSGNAGPSVGTKVAKYPQCPRPELV 169

Query: 515  KGLRAHTDAGGIILLLQDDQVPGLEFFKDGKWVEIPPSTNNTIFINTGDQVEILSNGRYK 336
            +GLR HTDAGGIILLLQDDQVPGLEF+KDG+WV IPPS NNTIF+NTGDQ+E+LSNGRYK
Sbjct: 170  RGLREHTDAGGIILLLQDDQVPGLEFYKDGEWVVIPPSKNNTIFVNTGDQIEVLSNGRYK 229

Query: 335  SVLHRVMADENGSRLSIATFYNPVGDAIISPAPELLYPHSLSFQDYLKLYATTKFTDKST 156
            S LHRVMAD+NGSRLSIATFYNP GDAIISPAP+LLYP    FQDYLKLYATTKF DK  
Sbjct: 230  STLHRVMADKNGSRLSIATFYNPSGDAIISPAPKLLYPDHFRFQDYLKLYATTKFADKGP 289

Query: 155  RFKSLKKIAGGQAKL 111
            RF+S+K +A G   L
Sbjct: 290  RFESMKNMAIGHHSL 304


>gb|AAX84675.1| ACC oxidase ACCO2 [Manihot esculenta]
          Length = 306

 Score =  426 bits (1096), Expect = e-117
 Identities = 215/317 (67%), Positives = 240/317 (75%)
 Frame = -3

Query: 1055 MEIPVIDLEGLNGDLSNKTMDLLHQACEKWGFFKVSNHGIDVELMEKVKRLVNMHYEEYM 876
            MEIPVID   LNG+  +K M LLH+ACEKWGFF+V NHGID  LMEKVK+LVN HYEE +
Sbjct: 1    MEIPVIDFSELNGENRSKMMGLLHEACEKWGFFQVENHGIDKSLMEKVKQLVNFHYEENL 60

Query: 875  KESFYGSDIVKGLQSKEAIREKDWESSFFIWHXXXXXXXXXXXXXXXXXXXXXXXXXXXX 696
            +ESFY S I K L +     + DWESS+FIWH                            
Sbjct: 61   EESFYASAIAKRLNNPGNTSDIDWESSYFIWHRPTSNISEIPNLPQEFCKWMD------- 113

Query: 695  XXXXEYINQVYKLAEKLSELMCENLGLEKDYIKKAFSGPRGPSVGTKVAKYPRCPQPELV 516
                EYI Q+ KLAEK+SEL+ ENLGLEKD+IK+ F G RGPSVGTKVAKYP+CPQPELV
Sbjct: 114  ----EYITQLIKLAEKISELISENLGLEKDHIKEVFKGDRGPSVGTKVAKYPKCPQPELV 169

Query: 515  KGLRAHTDAGGIILLLQDDQVPGLEFFKDGKWVEIPPSTNNTIFINTGDQVEILSNGRYK 336
            +GLR HTDAGGIILLLQDDQVPGLEF KDGKWVEIPPS NN IFINTGDQ+E+LSNGRYK
Sbjct: 170  RGLREHTDAGGIILLLQDDQVPGLEFLKDGKWVEIPPSKNNRIFINTGDQLEVLSNGRYK 229

Query: 335  SVLHRVMADENGSRLSIATFYNPVGDAIISPAPELLYPHSLSFQDYLKLYATTKFTDKST 156
            S LHRVMAD+NGSRLSIATFYNP GDAIISPAP+LLYP + SFQDYLKLYATTKF DK  
Sbjct: 230  SALHRVMADKNGSRLSIATFYNPAGDAIISPAPKLLYPSNYSFQDYLKLYATTKFLDKEP 289

Query: 155  RFKSLKKIAGGQAKLLV 105
            RF+S+KK+A G   L V
Sbjct: 290  RFESMKKMANGHHGLHV 306


>dbj|BAG15873.1| ACC oxidase [Bruguiera gymnorhiza]
          Length = 306

 Score =  420 bits (1080), Expect = e-115
 Identities = 210/315 (66%), Positives = 240/315 (76%)
 Frame = -3

Query: 1055 MEIPVIDLEGLNGDLSNKTMDLLHQACEKWGFFKVSNHGIDVELMEKVKRLVNMHYEEYM 876
            MEIPVI L+  +G+  +KTM LLHQACEKWGFF V NHGID  LMEKVK+LVN HYEE +
Sbjct: 1    MEIPVIRLDEADGEDRSKTMSLLHQACEKWGFFMVDNHGIDEVLMEKVKQLVNCHYEENL 60

Query: 875  KESFYGSDIVKGLQSKEAIREKDWESSFFIWHXXXXXXXXXXXXXXXXXXXXXXXXXXXX 696
            KESFY S+I   L + E   + DWES+FFIWH                            
Sbjct: 61   KESFYESEIANKLNNNENTPDTDWESTFFIWHRPKSNIHEIPKLPGNLCKAMD------- 113

Query: 695  XXXXEYINQVYKLAEKLSELMCENLGLEKDYIKKAFSGPRGPSVGTKVAKYPRCPQPELV 516
                EYI Q+ KLAEKLSELMCENLGLEK +IK+AFSG +GPSVGTKVAKYP+CPQPELV
Sbjct: 114  ----EYIAQLIKLAEKLSELMCENLGLEKCHIKEAFSGSKGPSVGTKVAKYPQCPQPELV 169

Query: 515  KGLRAHTDAGGIILLLQDDQVPGLEFFKDGKWVEIPPSTNNTIFINTGDQVEILSNGRYK 336
            +GLR HTDAGGIILLLQDD+VPGLEF KDG+WVEIPPS NNTIF+NTGDQ+E+LSNGRYK
Sbjct: 170  RGLREHTDAGGIILLLQDDRVPGLEFLKDGEWVEIPPSKNNTIFVNTGDQIEVLSNGRYK 229

Query: 335  SVLHRVMADENGSRLSIATFYNPVGDAIISPAPELLYPHSLSFQDYLKLYATTKFTDKST 156
            S LHRVMAD+NGSRLSIATFYNP  DAIISP+P LLYP++ SFQ+YLK YAT+KF DK  
Sbjct: 230  SALHRVMADKNGSRLSIATFYNPANDAIISPSPRLLYPNNYSFQEYLKHYATSKFADKEP 289

Query: 155  RFKSLKKIAGGQAKL 111
            RF+ +KK+A G   L
Sbjct: 290  RFEHMKKMANGSYNL 304


>ref|XP_002514144.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus
            communis] gi|223546600|gb|EEF48098.1|
            1-aminocyclopropane-1-carboxylate oxidase, putative
            [Ricinus communis]
          Length = 308

 Score =  419 bits (1076), Expect = e-115
 Identities = 207/311 (66%), Positives = 240/311 (77%)
 Frame = -3

Query: 1055 MEIPVIDLEGLNGDLSNKTMDLLHQACEKWGFFKVSNHGIDVELMEKVKRLVNMHYEEYM 876
            MEIPVID   L G+  +K + +L +ACEKWGFF+V NHGID +LMEKVK+LVN HYE+ +
Sbjct: 1    MEIPVIDFSQLKGENRSKMLAVLQEACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEQNL 60

Query: 875  KESFYGSDIVKGLQSKEAIREKDWESSFFIWHXXXXXXXXXXXXXXXXXXXXXXXXXXXX 696
            KE+FY S+I K L +K    + DWESS+FIWH                            
Sbjct: 61   KETFYKSEIAKRLDNKGNTSDIDWESSYFIWHRPTSNINDIPNLQEDFGKSMD------- 113

Query: 695  XXXXEYINQVYKLAEKLSELMCENLGLEKDYIKKAFSGPRGPSVGTKVAKYPRCPQPELV 516
                EYI Q+ +LAEK+SELMCENLGLEKD IK+AFSG  GPSVGTKVAKYPRCPQPELV
Sbjct: 114  ----EYITQLIELAEKISELMCENLGLEKDDIKEAFSGDGGPSVGTKVAKYPRCPQPELV 169

Query: 515  KGLRAHTDAGGIILLLQDDQVPGLEFFKDGKWVEIPPSTNNTIFINTGDQVEILSNGRYK 336
            +GLR HTDAGGIILLLQDDQVPGLEF KDG+WVEIPPS NN IF+NTGDQ+E+LSNGRYK
Sbjct: 170  RGLREHTDAGGIILLLQDDQVPGLEFLKDGEWVEIPPSKNNRIFVNTGDQLEVLSNGRYK 229

Query: 335  SVLHRVMADENGSRLSIATFYNPVGDAIISPAPELLYPHSLSFQDYLKLYATTKFTDKST 156
            S LHRVMAD+NGSRLSIATFYNP GDAIISPAP+LLYP++ +FQDYLKLY+TTKF DK  
Sbjct: 230  STLHRVMADKNGSRLSIATFYNPAGDAIISPAPKLLYPNNYTFQDYLKLYSTTKFLDKGP 289

Query: 155  RFKSLKKIAGG 123
            RF+S+KK+  G
Sbjct: 290  RFESMKKMTNG 300


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