BLASTX nr result
ID: Coptis23_contig00001536
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001536
(1847 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269865.1| PREDICTED: uncharacterized protein LOC100241... 396 e-107
emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera] 396 e-107
ref|XP_003539004.1| PREDICTED: uncharacterized protein LOC100789... 374 e-101
ref|XP_002522432.1| conserved hypothetical protein [Ricinus comm... 369 2e-99
ref|XP_004166522.1| PREDICTED: TATA box-binding protein-associat... 368 3e-99
>ref|XP_002269865.1| PREDICTED: uncharacterized protein LOC100241425 [Vitis vinifera]
Length = 722
Score = 396 bits (1017), Expect = e-107
Identities = 227/556 (40%), Positives = 305/556 (54%), Gaps = 21/556 (3%)
Frame = -2
Query: 1606 CTKCLSTQGYDCEDGFYYCRSCGEKVEDMMETEFLMED-LRTSQKETMLLLTTHRLKAPP 1430
C C S D DGF+YC CG + ED+++T ED + + +HR +
Sbjct: 9 CHVCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAKGDARGAIYSASHRRQRHS 68
Query: 1429 IKAEPISFLSPNETQQQQQSCFDNRIPKDEPYV-------------------PDDFGSGV 1307
I +P E Q QS F N + D+ Y P DFG G+
Sbjct: 69 IAPKP-------EPLSQSQSQFLNNLTLDDDYRVENEETREETVADEVGPSGPSDFGLGL 121
Query: 1306 DELQ-LSPENVSSEVRIRYLMGIQFMIKFQCKTLVEKFGVSQLIYGFAPVIWMRFVVASR 1130
D LS E+ +++RIRY+MG+Q MI+ QC+ LVEKF S LI G A IW+RFV +R
Sbjct: 122 DGSDGLSFEDYYTQLRIRYVMGVQIMIELQCQALVEKFKASPLICGVAGTIWLRFVATTR 181
Query: 1129 VFDEHWADKTFEDSELQDKDVXXXXXXXXXXXSGTYNIYGQSGAMIWFKSLRKRIPISSS 950
VFD+ WADK +DSE+Q + +NIYGQ +IW +SL+K+IP+S S
Sbjct: 182 VFDDEWADKVIQDSEMQKPGESEDLKPRAKYSAEPHNIYGQRAVIIWHRSLKKKIPLSCS 241
Query: 949 LAVSFLACHLAREPILPTDIYKWALEEKLPYLKAFLDIERQFGRPSSACPYSPSVMFKPY 770
L +SFLACH+ARE ILPTDI KW+LE KLPY AF++IE+Q G PSS CP S S MF+P
Sbjct: 242 LVISFLACHIAREAILPTDILKWSLEGKLPYFAAFIEIEKQIGPPSSPCPLSSSFMFRPS 301
Query: 769 KVVGPRELEFMSGFVAQTIGLELPPVNFFAIANRYLNELSLPPDKILPLAARIYEWSMPP 590
+ + ++LE + +A IGL LPPVNF+AIA RYL +L LP +KILP A R+YEWSMPP
Sbjct: 302 EAIPLQKLEAQAASIADFIGLHLPPVNFYAIAFRYLEQLFLPVEKILPYACRVYEWSMPP 361
Query: 589 DLWLSANQKRLPSRVCVMSIILLAIRLLYNINGFGKWEESFAGPTISQSNQGRDGNVEVC 410
DLWLSAN+ RLP+RVCVMSI+++ IR+LYN++GFGKWE S +S S+ + ++
Sbjct: 362 DLWLSANELRLPTRVCVMSILIVTIRILYNVHGFGKWEMS-----LSSSSGSSSSSSQIV 416
Query: 409 SLSSDTPEXXXXXXXXXXXXNVSRERSRSFDPNGKPKKRKNTVWSSRSSSLPGKRNPNKI 230
L++ + +++ S D NG N +
Sbjct: 417 KLNAS---------DNIKMMDGAKQGSPLHDLNGS--------------------NEEPV 447
Query: 229 RGLLNDHNYGFDTXXXXXXXXXXXXNIDDKEEYLKDLPTYLKYCQDVVFAGLKPLLXXXX 50
+ FD + D EY KDLPTYL+YC+DVVFAGL+
Sbjct: 448 TNSSHAQKSEFDATELLCNLDARYDELIDTYEYSKDLPTYLQYCKDVVFAGLELPFEDHE 507
Query: 49 XXXXXEKLWNFYERQE 2
E+LW FY+ Q+
Sbjct: 508 EEKIIEQLWEFYQNQK 523
>emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]
Length = 722
Score = 396 bits (1017), Expect = e-107
Identities = 227/556 (40%), Positives = 305/556 (54%), Gaps = 21/556 (3%)
Frame = -2
Query: 1606 CTKCLSTQGYDCEDGFYYCRSCGEKVEDMMETEFLMED-LRTSQKETMLLLTTHRLKAPP 1430
C C S D DGF+YC CG + ED+++T ED + + +HR +
Sbjct: 9 CHVCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAKGDARGAIYSASHRRQRHS 68
Query: 1429 IKAEPISFLSPNETQQQQQSCFDNRIPKDEPYV-------------------PDDFGSGV 1307
I +P E Q QS F N + D+ Y P DFG G+
Sbjct: 69 IAPKP-------EPLSQSQSQFLNNLTLDDDYRVENEETREETVADEVGPSGPSDFGLGL 121
Query: 1306 DELQ-LSPENVSSEVRIRYLMGIQFMIKFQCKTLVEKFGVSQLIYGFAPVIWMRFVVASR 1130
D LS E+ +++RIRY+MG+Q MI+ QC+ LVEKF S LI G A IW+RFV +R
Sbjct: 122 DGSDGLSFEDYYTQLRIRYVMGVQIMIELQCQALVEKFKASPLICGVAGTIWLRFVATTR 181
Query: 1129 VFDEHWADKTFEDSELQDKDVXXXXXXXXXXXSGTYNIYGQSGAMIWFKSLRKRIPISSS 950
VFD+ WADK +DSE+Q + +NIYGQ +IW +SL+K+IP+S S
Sbjct: 182 VFDDEWADKVIQDSEMQKPGESEDLKPRTKYSAEPHNIYGQRAVIIWHRSLKKKIPLSCS 241
Query: 949 LAVSFLACHLAREPILPTDIYKWALEEKLPYLKAFLDIERQFGRPSSACPYSPSVMFKPY 770
L +SFLACH+ARE ILPTDI KW+LE KLPY AF++IE+Q G PSS CP S S MF+P
Sbjct: 242 LVISFLACHIAREAILPTDILKWSLEGKLPYFAAFIEIEKQIGPPSSPCPLSSSFMFRPS 301
Query: 769 KVVGPRELEFMSGFVAQTIGLELPPVNFFAIANRYLNELSLPPDKILPLAARIYEWSMPP 590
+ + ++LE + +A IGL LPPVNF+AIA RYL +L LP +KILP A R+YEWSMPP
Sbjct: 302 EAIPLQKLEAQAASIADFIGLHLPPVNFYAIAFRYLEQLFLPVEKILPYACRVYEWSMPP 361
Query: 589 DLWLSANQKRLPSRVCVMSIILLAIRLLYNINGFGKWEESFAGPTISQSNQGRDGNVEVC 410
DLWLSAN+ RLP+RVCVMSI+++ IR+LYN++GFGKWE S +S S+ + ++
Sbjct: 362 DLWLSANELRLPTRVCVMSILIVTIRILYNVHGFGKWEMS-----LSSSSGSSSSSSQIV 416
Query: 409 SLSSDTPEXXXXXXXXXXXXNVSRERSRSFDPNGKPKKRKNTVWSSRSSSLPGKRNPNKI 230
L++ + +++ S D NG N +
Sbjct: 417 KLNAS---------DNIKMMDGAKQGSPLHDLNGS--------------------NEEPV 447
Query: 229 RGLLNDHNYGFDTXXXXXXXXXXXXNIDDKEEYLKDLPTYLKYCQDVVFAGLKPLLXXXX 50
+ FD + D EY KDLPTYL+YC+DVVFAGL+
Sbjct: 448 TNSSHAQKSEFDATELLCNLDARYDELIDTYEYSKDLPTYLQYCKDVVFAGLELPFEDHE 507
Query: 49 XXXXXEKLWNFYERQE 2
E+LW FY+ Q+
Sbjct: 508 EEKIIEQLWEFYQNQK 523
>ref|XP_003539004.1| PREDICTED: uncharacterized protein LOC100789168 [Glycine max]
Length = 719
Score = 374 bits (961), Expect = e-101
Identities = 217/561 (38%), Positives = 304/561 (54%), Gaps = 26/561 (4%)
Frame = -2
Query: 1606 CTKCLSTQGYDCEDGFYYCRSCGEKVEDMMETEFLMEDLRTSQKETMLLLTTHRLKAPPI 1427
C C + D DGF+YC CG + ED+M+T +DL K + L + R ++ I
Sbjct: 9 CQTCNNVGVGDGSDGFFYCLRCGSQCEDVMDTAVDDDDL--FNKSAVYLPSHQRQRSVAI 66
Query: 1426 KAEPISFLSP----------------------NETQQQQQSCFDN-RIPKDEPYVPDDFG 1316
KAEPIS + Q +++ FD + + P VP DFG
Sbjct: 67 KAEPISQYDSFYDSHSNFIRNLGLEDENPQRNDHVQVKREEEFDAAQFDEASPSVPADFG 126
Query: 1315 SGVDELQLSP-ENVSSEVRIRYLMGIQFMIKFQCKTLVEKFGVSQLIYGFAPVIWMRFVV 1139
Q++ E+ +E+R+RY+MG+Q MI+ QC+ LV++F V+ LI G IW+RFV
Sbjct: 127 GS----QVACFEDYHNEIRMRYVMGLQMMIELQCEALVKEFKVTPLICGLVGPIWLRFVS 182
Query: 1138 ASRVFDEHWADKTFEDSELQDKDVXXXXXXXXXXXSGTYNIYGQSGAMIWFKSLRKRIPI 959
+ +F + WADK DSE Q++D + +N++G+ MIWF+SL+KRIP+
Sbjct: 183 KTGIFGDDWADKVIHDSETQNEDEPEDYKLRAKYRTEPHNMFGKRAVMIWFRSLKKRIPL 242
Query: 958 SSSLAVSFLACHLAREPILPTDIYKWALEEKLPYLKAFLDIERQFGRPSSACPYSPSVMF 779
++AVSFLACH+ARE +LP+D+ KW LE KLPY AF++IE++ G+P+SACP S SVMF
Sbjct: 243 PCTVAVSFLACHVAREAVLPSDMMKWTLEGKLPYFSAFVEIEKRMGQPTSACPISSSVMF 302
Query: 778 KPYKVVGPRELEFMSGFVAQTIGLELPPVNFFAIANRYLNELSLPPDKILPLAARIYEWS 599
+P + + ++LE + +AQ IGLELPPVNF+AIA +L +LSLP +KILP A RIYEWS
Sbjct: 303 RPQQAIPVQKLESFAASIAQFIGLELPPVNFYAIAYLFLQKLSLPVEKILPYACRIYEWS 362
Query: 598 MPPDLW--LSANQKRLPSRVCVMSIILLAIRLLYNINGFGKWEESFAGPTISQSNQGRDG 425
MPPDLW LS+N RLP+ VCVMSI+++AIR+LYNINGFG+WE+S
Sbjct: 363 MPPDLWLSLSSNYFRLPTHVCVMSILVVAIRILYNINGFGEWEKSL-------------- 408
Query: 424 NVEVCSLSSDTPEXXXXXXXXXXXXNVSRERSRSFDPNGKPKKRKNTVWSSRSSSLPGKR 245
S D + K ++S + GK
Sbjct: 409 ---------------------------------SRDDDAKDNSEMGNAFASDNGHDFGKE 435
Query: 244 NPNKIRGLLNDHNYGFDTXXXXXXXXXXXXNIDDKEEYLKDLPTYLKYCQDVVFAGLKPL 65
+ + + + D+ I D Y KDL TYLKYC+DVVFAG +P
Sbjct: 436 SKDSAEDQVGSQKHELDSAWLLQHLQARYNEIADTYGYSKDLATYLKYCRDVVFAGSEPS 495
Query: 64 LXXXXXXXXXEKLWNFYERQE 2
E LW FY+ +E
Sbjct: 496 YGNHEEEKMIEYLWKFYQNEE 516
>ref|XP_002522432.1| conserved hypothetical protein [Ricinus communis]
gi|223538317|gb|EEF39924.1| conserved hypothetical
protein [Ricinus communis]
Length = 751
Score = 369 bits (946), Expect = 2e-99
Identities = 221/560 (39%), Positives = 310/560 (55%), Gaps = 25/560 (4%)
Frame = -2
Query: 1606 CTKCLSTQGYDCEDGFYYCRSCGEKVEDMMETEFLMEDLRTSQKETMLLL-----TTHRL 1442
C +C G + DGFYYC+ CG + +D++ T ED E L T +
Sbjct: 14 CRRC-GHVGLEESDGFYYCQECGAQADDIILTGVADEDFIEKDGEGGGALYSARFTRYSQ 72
Query: 1441 KAPPIKAEPISFLSPNETQQQQQSCFDN-----------RIPKDEPYVPDDFGSGVDELQ 1295
I+ P S TQ+++ F +I K+E + D++ G+ ++
Sbjct: 73 PTRTIQTNPSSQAWFRYTQEEEDINFTTTTTLNGTYSNIKIKKEERFDDDEYLDGLGPVE 132
Query: 1294 --------LSPENVSSEVRIRYLMGIQFMIKFQCKTLVEKFGVSQLIYGFAPVIWMRFVV 1139
LS E+ +EVRIRY+MG+Q+MI+ QC++LVEKF VS LI G A +W+RF+V
Sbjct: 133 PEDFGGKSLSYEDYYNEVRIRYVMGMQWMIQLQCESLVEKFNVSPLICGVAGNVWLRFLV 192
Query: 1138 ASRVFDEHWADKTFEDSELQDKDVXXXXXXXXXXXSGTYNIYGQSGAMIWFKSLRKRIPI 959
A+ VF ++WAD +SE Q + + +N YGQ M+WFK LRK IP+
Sbjct: 193 ATGVFKDNWADDVILESESQVQGEPEDWKPRSSHRNEPHNAYGQRAVMVWFKYLRKTIPL 252
Query: 958 SSSLAVSFLACHLAREPILPTDIYKWALEEKLPYLKAFLDIERQFGRPSSACPYSPSVMF 779
SSSLA+SFLACH+ARE ILPTDI +W++E KLPY A ++IE++F S ACP S S+MF
Sbjct: 253 SSSLAISFLACHVAREAILPTDIVRWSIEGKLPYFAAHVEIEKRFEHSSPACPISSSLMF 312
Query: 778 KPYKVVGPRELEFMSGFVAQTIGLELPPVNFFAIANRYLNELSLPPDKILPLAARIYEWS 599
+P + V ++LE M+ A++IGL LPPVNF+ IA+RYL L+LP +KILP A RIYEWS
Sbjct: 313 RPSQAVPAQKLESMAAAFAESIGLHLPPVNFYEIASRYLKNLALPVEKILPHACRIYEWS 372
Query: 598 MPPDLWLSANQKRLPSRVCVMSIILLAIRLLYNINGFGKWEESFAGPTISQSNQGRDGNV 419
MPPDLWLS N+ RLP+RV VMSI+++AIR+LYN+NGFG WE S + S SN +
Sbjct: 373 MPPDLWLSTNELRLPTRVTVMSILIVAIRILYNLNGFGAWERSLSSLNCSPSNSHPASRL 432
Query: 418 EVCSLSSDTPEXXXXXXXXXXXXNVSRERSRSFDPNGKPKKRKNTVWSSRSSSLPGKRNP 239
+ ++ R + G P +S S+ RNP
Sbjct: 433 D----------------------SMCRSVMQGDAETGSP------FYSLDGSAEKFLRNP 464
Query: 238 NKIRGLLNDHNYGFDTXXXXXXXXXXXXNIDDKEEYLKDLPTYLKYCQDVVFAGLKPL-L 62
+ ++ D+ I D E+ KDLP+YL+YC+DVVFAG P +
Sbjct: 465 SHMQ------MPELDSAELLHHLEVKYNFIADAYEFTKDLPSYLQYCKDVVFAGAGPSHM 518
Query: 61 XXXXXXXXXEKLWNFYERQE 2
EKLW+FY+ ++
Sbjct: 519 DDLEEEELMEKLWDFYQNEK 538
>ref|XP_004166522.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
I subunit B-like [Cucumis sativus]
Length = 735
Score = 368 bits (944), Expect = 3e-99
Identities = 220/565 (38%), Positives = 306/565 (54%), Gaps = 30/565 (5%)
Frame = -2
Query: 1606 CTKCLSTQGYDCEDGFYYCRSCGEKVEDMMETEFLMEDL---RTSQKETMLLLTTHRLKA 1436
C C S D DGF+YC CG + +D+++T EDL + + +H +
Sbjct: 9 CYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLVLRDVGKSGAPIYSQSHTRRR 68
Query: 1435 PP--IKAEPISFLSPNETQQQQQSCFDNRIPKDE-------------------PYVPDDF 1319
P +K EP+S Q + + +D P P+DF
Sbjct: 69 NPTVLKVEPLSQSQSLFGTSQSEFWDSLNLMEDPSGNVGGKDGDIVMLNDGVGPTGPEDF 128
Query: 1318 GSGVDELQLSP--ENVSSEVRIRYLMGIQFMIKFQCKTLVEKFGVSQLIYGFAPVIWMRF 1145
GSG D L P E + EVR+RY+MG+Q +++ QC+ LV++F + +I G A IW+RF
Sbjct: 129 GSG-DVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKEFKATPIICGLAASIWLRF 187
Query: 1144 VVASRVFDEHWADKTFEDSELQDKDVXXXXXXXXXXXSGTYNIYGQSGAMIWFKSLRKRI 965
V A+RVFDE WA +T ++SE Q D +N YGQ ++W KSLRK+I
Sbjct: 188 VTATRVFDEDWAFQTVQESESQCLDPERIRRVCSSHKDEPHNFYGQRVVVLWVKSLRKKI 247
Query: 964 PISSSLAVSFLACHLAREPILPTDIYKWALEEKLPYLKAFLDIERQFGRPSSACPYSPSV 785
P+ S+LAVSFLACH+ARE ILPTDI KW+LE KLPY AF+DIE + G+ S ACP S +
Sbjct: 248 PLFSTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFVDIESRIGKTSRACPISSKL 307
Query: 784 MFKPYKVVGPRELEFMSGFVAQTIGLELPPVNFFAIANRYLNELSLPPDKILPLAARIYE 605
M +P ++ ++LE ++ +A TIGL LPPVNF +IA RYLN+L+LP DKILP A RIYE
Sbjct: 308 MHRPSRISSLQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKILPHACRIYE 367
Query: 604 WSMPPDLWLSANQKRLPSRVCVMSIILLAIRLLYNINGFGKWEESFAGPTISQSNQGRDG 425
WSMPPDLWLS N+ RLPSRVCVMSI+++A+R+LYN++GFG+WE+S
Sbjct: 368 WSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKS--------------- 412
Query: 424 NVEVCSLSSDTPEXXXXXXXXXXXXNVSRERSRSFDPNGKPKKRKNTVWSSR---SSSLP 254
+S + + F P+ K +S+ S + P
Sbjct: 413 --------------------------LSVDCASCFPPHQKTHSSPANNFSNMQADSENRP 446
Query: 253 GKRNPNKIRGLLNDHNYGFDTXXXXXXXXXXXXNIDDKEEYLKDLPTYLKYCQDVVFAGL 74
G + + ++ N T I + EY KDLPTYL+YC+DV FAG
Sbjct: 447 GFTSHDVDNPSVSPENPHLTTTEFLRKIEARYHEIAETYEYSKDLPTYLQYCKDVAFAGS 506
Query: 73 KPL-LXXXXXXXXXEKLWNFYERQE 2
+ L + EKLWN+Y+ ++
Sbjct: 507 ESLFIDDHDEQKMIEKLWNYYQNEK 531