BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001520
         (1594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278933.2| PREDICTED: zinc finger protein NUTCRACKER-li...   468   e-129
ref|XP_002280155.2| PREDICTED: zinc finger protein NUTCRACKER is...   417   e-114
emb|CAN79105.1| hypothetical protein VITISV_006257 [Vitis vinifera]   417   e-114
ref|XP_003529728.1| PREDICTED: zinc finger protein NUTCRACKER-li...   347   7e-93
ref|XP_002527396.1| nucleic acid binding protein, putative [Rici...   347   7e-93

>ref|XP_002278933.2| PREDICTED: zinc finger protein NUTCRACKER-like [Vitis vinifera]
          Length = 509

 Score =  468 bits (1204), Expect = e-129
 Identities = 265/458 (57%), Positives = 302/458 (65%), Gaps = 14/458 (3%)
 Frame = +1

Query: 1    CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKRVYVCPEPSCVHHDPSRALGDLT 180
            CEICNKGFQRDQNLQLHRRGHNLPWKLKQRT+KE+RK+VYVCPEP+CVHHDPSRALGDLT
Sbjct: 65   CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVRKKVYVCPEPTCVHHDPSRALGDLT 124

Query: 181  GIKKHFFRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFITHR 360
            GIKKHF RKHGE           YAVQSDWKAHSK CGTREY+CDCGTLFSRRDSFITHR
Sbjct: 125  GIKKHFSRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHR 184

Query: 361  AFCDALAEESARAVTVNPLISTQSGNSAPHMNLQAQFSIHDFQGV-QIKR--XXXXXXXX 531
            AFCDALAEESARA+T NPL+S+Q G+S+ H+NLQ Q   H  Q V  +KR          
Sbjct: 185  AFCDALAEESARAITGNPLLSSQPGSSSSHLNLQPQLHSHGLQAVLSLKREQEQHHSFNL 244

Query: 532  XXXXXXWLASAPTLGGGPGPPHIDLSQTIFQ-RFEHE--FSQNQQTSSTHEXXXXXXXXX 702
                  WLA  P L  GPGPP IDLS ++F    +H   + +N   +ST           
Sbjct: 245  KPDIPPWLACPPVLEAGPGPPSIDLSSSLFSASLDHPLIYHENPNPNST----------L 294

Query: 703  XXXXXXXXXHMSATALLQKAAQMGSTMSHPS-TGMLIRPQNSHMS-ANTGNPTAATA--- 867
                     HMSATALLQ+AAQMG TMS PS +  ++RP  +HMS AN G  + A A   
Sbjct: 295  PSFHHTASPHMSATALLQQAAQMGVTMSKPSPSPPMLRPHQAHMSAANAGFSSTAVATST 354

Query: 868  CGFGLGLSSHEELESGLMHTLTAFGNKTSTIPSGLMGHL-TGASTSPRASLL--QEMSCL 1038
             G  LGLSS +E+ SG +H L +FG+K + + SG M H+ TGA     A  L    MS L
Sbjct: 355  AGSDLGLSSRDEMASGFIHGLASFGSK-AAVTSGFMEHVATGAGAGAAAPSLFHDMMSSL 413

Query: 1039 TSDSGFDGSSFEEAFGGMLNTKSERNPTQNSKTTERTTKLPCRNXXXXXXXXXXLTRDFL 1218
            +S SGF G SFEEAF GMLN K E N  + +KT   T     R+          LTRDFL
Sbjct: 414  SSASGFGGPSFEEAFNGMLNPKRENNLQEITKTA-MTKSHFSRSDHEGGGGNDGLTRDFL 472

Query: 1219 GLRAFPRRDFLNIAGLDQRIGSAVPYEQQNQNQKPWQG 1332
            GLRAF  RDFLNI GLDQ + SA PYEQQNQNQ PWQG
Sbjct: 473  GLRAFSHRDFLNIPGLDQ-MNSASPYEQQNQNQTPWQG 509


>ref|XP_002280155.2| PREDICTED: zinc finger protein NUTCRACKER isoform 2 [Vitis vinifera]
          Length = 509

 Score =  417 bits (1073), Expect = e-114
 Identities = 238/472 (50%), Positives = 285/472 (60%), Gaps = 28/472 (5%)
 Frame = +1

Query: 1    CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKRVYVCPEPSCVHHDPSRALGDLT 180
            CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RK+VYVCPE SCVHHDPSRALGDLT
Sbjct: 56   CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVCPEASCVHHDPSRALGDLT 115

Query: 181  GIKKHFFRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFITHR 360
            GIKKHF RKHGE           YAVQSDWKAHSKTCGTREY+CDCGTLFSRRDSFITHR
Sbjct: 116  GIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHR 175

Query: 361  AFCDALAEESARAVTVNP-LISTQS----GNSAPH----MNLQAQ---FSIHDFQGVQIK 504
            AFCDALAEESARA+T NP L+S+Q+     +S PH    M+LQ Q    S HDF   Q+K
Sbjct: 176  AFCDALAEESARAITGNPVLLSSQAAAGPSSSTPHSHSQMSLQQQQQFNSNHDFHAFQMK 235

Query: 505  RXXXXXXXXXXXXXXWLASAPTLGGGPGPPHIDLSQTIFQRFEHEFSQNQQTSSTHE--- 675
            +              WL+S+ +L                 R +H+F+Q  Q  + H+   
Sbjct: 236  KEQQSFSIRSEVVPPWLSSSSSL--------------FPTRLDHDFTQTTQDLALHDIQN 281

Query: 676  --XXXXXXXXXXXXXXXXXXHMSATALLQKAAQMGSTMSHPSTG------MLIRPQNSHM 831
                                HMSATALLQKAAQMG+TMS  + G       +IRP  +H+
Sbjct: 282  PNPNPSLGPTLPPYHPTLSPHMSATALLQKAAQMGATMSKTTGGSGASPPAMIRPHQAHV 341

Query: 832  SANTGNPTAATACGFGLGLSSHEELESGLMHTLTAFGNKTSTIPSGLMGHLT-----GAS 996
            SA   + +     GFGL LSS EE+  G +  L  FGNK + +PS            G +
Sbjct: 342  SA---DHSCNNTTGFGLNLSSREEMGGGFVQGLAPFGNKAAAVPSAAAAAAAATGPGGGA 398

Query: 997  TSPRASLLQEMSCLTSDSGFDGSSFEEAFGGMLNTKSERNPTQNSKTTERTTKLPCRNXX 1176
             SP   L   M+ L+S +GFD SSFE+AFGGMLN++   N    +  ++ TT     +  
Sbjct: 399  PSPSLLLQDMMTSLSSATGFDSSSFEDAFGGMLNSRKNGNNLHQTLPSKSTTTTATTHHS 458

Query: 1177 XXXXXXXXLTRDFLGLRAFPRRDFLNIAGLDQRIGSAVPYEQQNQNQKPWQG 1332
                    LTRDFLGLRA    D L+IAGL   + ++ P++ QNQ QKPWQG
Sbjct: 459  SGGAGNDGLTRDFLGLRALSHSDILSIAGLGTCMNTS-PHDHQNQTQKPWQG 509


>emb|CAN79105.1| hypothetical protein VITISV_006257 [Vitis vinifera]
          Length = 532

 Score =  417 bits (1073), Expect = e-114
 Identities = 238/472 (50%), Positives = 285/472 (60%), Gaps = 28/472 (5%)
 Frame = +1

Query: 1    CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKRVYVCPEPSCVHHDPSRALGDLT 180
            CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RK+VYVCPE SCVHHDPSRALGDLT
Sbjct: 79   CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVCPEASCVHHDPSRALGDLT 138

Query: 181  GIKKHFFRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFITHR 360
            GIKKHF RKHGE           YAVQSDWKAHSKTCGTREY+CDCGTLFSRRDSFITHR
Sbjct: 139  GIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHR 198

Query: 361  AFCDALAEESARAVTVNP-LISTQS----GNSAPH----MNLQAQ---FSIHDFQGVQIK 504
            AFCDALAEESARA+T NP L+S+Q+     +S PH    M+LQ Q    S HDF   Q+K
Sbjct: 199  AFCDALAEESARAITGNPVLLSSQAAAGPSSSTPHSHSQMSLQQQQQFNSNHDFHAFQMK 258

Query: 505  RXXXXXXXXXXXXXXWLASAPTLGGGPGPPHIDLSQTIFQRFEHEFSQNQQTSSTHE--- 675
            +              WL+S+ +L                 R +H+F+Q  Q  + H+   
Sbjct: 259  KEQQSFSIRSEVVPPWLSSSSSL--------------FPTRLDHDFTQTTQDLALHDIQN 304

Query: 676  --XXXXXXXXXXXXXXXXXXHMSATALLQKAAQMGSTMSHPSTG------MLIRPQNSHM 831
                                HMSATALLQKAAQMG+TMS  + G       +IRP  +H+
Sbjct: 305  PNPNPSLGPTLPPYHPTLSPHMSATALLQKAAQMGATMSKTTGGSGASPPAMIRPHQAHV 364

Query: 832  SANTGNPTAATACGFGLGLSSHEELESGLMHTLTAFGNKTSTIPSGLMGHLT-----GAS 996
            SA   + +     GFGL LSS EE+  G +  L  FGNK + +PS            G +
Sbjct: 365  SA---DHSCNNTTGFGLNLSSREEMGGGFVQGLAPFGNKAAAVPSAAAAAAAATGPGGGA 421

Query: 997  TSPRASLLQEMSCLTSDSGFDGSSFEEAFGGMLNTKSERNPTQNSKTTERTTKLPCRNXX 1176
             SP   L   M+ L+S +GFD SSFE+AFGGMLN++   N    +  ++ TT     +  
Sbjct: 422  PSPSLLLQDMMTSLSSATGFDSSSFEDAFGGMLNSRKNGNNLHQTLPSKSTTTTATTHHS 481

Query: 1177 XXXXXXXXLTRDFLGLRAFPRRDFLNIAGLDQRIGSAVPYEQQNQNQKPWQG 1332
                    LTRDFLGLRA    D L+IAGL   + ++ P++ QNQ QKPWQG
Sbjct: 482  SGGAGNDGLTRDFLGLRALSHSDILSIAGLGTCMNTS-PHDHQNQTQKPWQG 532


>ref|XP_003529728.1| PREDICTED: zinc finger protein NUTCRACKER-like [Glycine max]
          Length = 498

 Score =  347 bits (889), Expect = 7e-93
 Identities = 215/455 (47%), Positives = 256/455 (56%), Gaps = 11/455 (2%)
 Frame = +1

Query: 1    CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKRVYVCPEPSCVHHDPSRALGDLT 180
            CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RK+VYVCPEPSCVHHDPSRALGDLT
Sbjct: 89   CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVCPEPSCVHHDPSRALGDLT 148

Query: 181  GIKKHFFRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFITHR 360
            GIKKHF RKHGE           YAVQSDWKAHSKTCGTREY+CDCGTLFSRRDSFITHR
Sbjct: 149  GIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHR 208

Query: 361  AFCDALAEESARAVTVNPLI-STQSGNSAPHMN-LQAQFSIHDFQGVQIKRXXXXXXXXX 534
            AFCDALAEESARA+  NPL+   Q  +S+ HM+ LQ QF+  +     +K+         
Sbjct: 209  AFCDALAEESARAI-ANPLLPPQQQQSSSSHMSTLQTQFNPQNLHAFPLKK--------- 258

Query: 535  XXXXXWLASAPTLGGGPGPPHIDLSQTIFQRFEHEFSQNQQTSSTHEXXXXXXXXXXXXX 714
                 WL    T+       H+  S +I     H+ + N     T               
Sbjct: 259  -EMPPWLGPPATV---VVDHHLSSSSSIMFSPPHQENPNPSLGPT----------LAAYQ 304

Query: 715  XXXXXHMSATALLQKAAQMGSTMSHPSTGMLIRPQNSHMSANTGNPTAATACGFGLGLSS 894
                 HMSATALLQKAAQMG+TMS          ++    A TG    A    FGL LSS
Sbjct: 305  TVPNPHMSATALLQKAAQMGATMS----------RSGSTPAMTGPHHHAHVSHFGLNLSS 354

Query: 895  HEELESGLMHTLTAFGNKTSTIPSGLMGH--------LTGASTSPRASLLQE-MSCLTSD 1047
             E+  +    T T   N  +    GL+             A +S   SLL + ++  +S 
Sbjct: 355  REDTTTTTPSTTTTNANTATVFSHGLLSSSPLGNKAAAAAAVSSSAPSLLHDVINSFSSP 414

Query: 1048 SGFDGSSFEEAFGGMLNTKSERNPTQNSKTTERTTKLPCRNXXXXXXXXXXLTRDFLGLR 1227
            S F+G+ FE+AF        + +      T  +T+     N          LTRDFLGLR
Sbjct: 415  SAFEGTPFEDAFIQSSKKLDDDHNLYLHDTFSKTSGAAGNN------INEGLTRDFLGLR 468

Query: 1228 AFPRRDFLNIAGLDQRIGSAVPYEQQNQNQKPWQG 1332
                 D L IAG    IG+ + ++QQNQ+QKPWQG
Sbjct: 469  PLSHADILTIAG----IGNCI-HDQQNQSQKPWQG 498


>ref|XP_002527396.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223533206|gb|EEF34962.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 552

 Score =  347 bits (889), Expect = 7e-93
 Identities = 226/487 (46%), Positives = 272/487 (55%), Gaps = 43/487 (8%)
 Frame = +1

Query: 1    CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE-IRKRVYVCPEPSCVHHDPSRALGDL 177
            CEICNKGFQRDQNLQLHRRGHNLPWKLKQRT+KE IRK+VYVCPE SCVHHDPSRALGDL
Sbjct: 89   CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVIRKKVYVCPETSCVHHDPSRALGDL 148

Query: 178  TGIKKHFFRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFITH 357
            TGIKKHF RKHGE           YAVQSDWKAHSKTCGTREY+CDCGTLFSRRDSFITH
Sbjct: 149  TGIKKHFSRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITH 208

Query: 358  RAFCDALAEESARAVT--VNPLI--STQSGNSAPHMN------------LQAQFSIHDFQ 489
            RAFCDALAEESARA+T   NPL+  S QS  +A                + +  ++H F 
Sbjct: 209  RAFCDALAEESARAITDAPNPLLIPSNQSAAAASSATQNPISLHQVPQLMNSHQNLHAFS 268

Query: 490  GVQIKRXXXXXXXXXXXXXXWLASAPTL-----GGGPGPPHIDLSQTIFQRFEHEFSQNQ 654
              + ++              WLA  P +     G GPGPPH   +              Q
Sbjct: 269  LKKEQQTFSTTTALRPELPPWLACPPGVLGSGSGHGPGPPHHQQTPIEHHHLSSSILNFQ 328

Query: 655  QT--SSTHEXXXXXXXXXXXXXXXXXXHMSATALLQKAAQMGSTMSHPST--GMLIRP-- 816
            Q   SS                     HMSATALLQKAAQMG+TMS  +T  G+++RP  
Sbjct: 329  QDLGSSNPNPSLGPTLPHYQAAPPPSPHMSATALLQKAAQMGATMSSKTTTAGLMMRPHQ 388

Query: 817  -----QNSHMSANTGNPTAATACGFGLGLSSHEELESGLMHTLTAFGNKTSTIPSGLMGH 981
                 + +H++A++ N  A T  GF L LSS ++        L A G   S + S     
Sbjct: 389  HQHQHEQAHVTADSTNNNANTT-GFVLNLSSRDQ-------ELAASGGGGSFVHSLQAAG 440

Query: 982  LTGASTSPRASLLQEM--SCLTSDSGFDG------SSFEEAF-GGMLNTKSERNPTQNSK 1134
              G        LLQEM  S  ++ SGF+G      +SFE+AF  G+LN   +     +  
Sbjct: 441  ANGV-------LLQEMMNSLSSAASGFEGTATATATSFEDAFVSGVLNNSKKDGNFLDGS 493

Query: 1135 TTERTTKLPCRNXXXXXXXXXXLTRDFLGLRAFPRRDFLNI-AGLDQRIGSAVPYEQQNQ 1311
             ++ TT                LTRDFLGLRAF   D LN+ AGL   + ++   +QQNQ
Sbjct: 494  LSKATTN--------GNNGGEDLTRDFLGLRAFSHSDILNMAAGLGNCVNTSHEQQQQNQ 545

Query: 1312 NQKPWQG 1332
            +QK W+G
Sbjct: 546  SQKTWRG 552