BLASTX nr result

ID: Coptis23_contig00001519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001519
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus...   158   4e-37
gb|ADE77677.1| unknown [Picea sitchensis]                             156   1e-36
ref|XP_002317108.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
gb|ABR16195.1| unknown [Picea sitchensis]                             149   2e-34
ref|NP_001062056.1| Os08g0480000 [Oryza sativa Japonica Group] g...   149   3e-34

>ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223541763|gb|EEF43311.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 496

 Score =  158 bits (400), Expect = 4e-37
 Identities = 76/144 (52%), Positives = 102/144 (70%)
 Frame = -1

Query: 478 VGVMVSMSLVIETTFVVIILATRNKFPSLFTENKLVMEEASKLAIFLSMSIILCSVQPVL 299
           V V V  S ++   F  +ILAT+N+FP +FT    VM+EASKL  FL+ +I L S+QPVL
Sbjct: 339 VMVTVLTSTILGVLFTAVILATKNEFPKVFTGKPAVMQEASKLGYFLAATIFLNSIQPVL 398

Query: 298 SGVAVGAGWQATVAYVNIVSYYLVGLTTGAILGFKFHFGLQGLWSGVILGIALQTVILVV 119
            GVAVGAGWQ +VA +NI  YY+VGL  GA+LG+KF  G++G+WSG++ G  LQ VIL+ 
Sbjct: 399 HGVAVGAGWQLSVALINIACYYIVGLPIGAVLGYKFKLGVKGIWSGMLAGCVLQIVILIF 458

Query: 118 MTLRTDWEKEAALAKVRISTWESS 47
           + LRT+W KEA  ++ R+ TW  S
Sbjct: 459 IMLRTNWNKEAVQSEERMRTWGGS 482


>gb|ADE77677.1| unknown [Picea sitchensis]
          Length = 517

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/158 (47%), Positives = 106/158 (67%)
 Frame = -1

Query: 478 VGVMVSMSLVIETTFVVIILATRNKFPSLFTENKLVMEEASKLAIFLSMSIILCSVQPVL 299
           V ++  MS +I   F ++I+  RN     FTE   V +  ++L+ FL+ SIIL  VQPVL
Sbjct: 355 VKIVTLMSFIISVIFGIVIILLRNVMSYAFTEGTEVADAVAELSPFLAFSIILNGVQPVL 414

Query: 298 SGVAVGAGWQATVAYVNIVSYYLVGLTTGAILGFKFHFGLQGLWSGVILGIALQTVILVV 119
           SGVAVG GWQA VAY+N+  YY++G+  G +LGFKF FG++G+WSG++ G  LQT+IL++
Sbjct: 415 SGVAVGCGWQALVAYINVGCYYVIGIPLGCLLGFKFDFGVKGIWSGMLGGTCLQTIILLI 474

Query: 118 MTLRTDWEKEAALAKVRISTWESSTDKCLNGPADFTDK 5
           +T RT+W KE   A  R+STW++     L+G  D T K
Sbjct: 475 ITYRTNWNKEVEKASHRLSTWDNKAPPNLDGNPDGTPK 512


>ref|XP_002317108.1| predicted protein [Populus trichocarpa] gi|222860173|gb|EEE97720.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/140 (50%), Positives = 99/140 (70%)
 Frame = -1

Query: 472 VMVSMSLVIETTFVVIILATRNKFPSLFTENKLVMEEASKLAIFLSMSIILCSVQPVLSG 293
           V+ S S +I     +I+L  R+    +FTE ++V + AS L+ FL+ ++IL  +QPVLSG
Sbjct: 284 VVTSCSFIISVIAAIIVLIFRDSISYIFTEGEVVAKAASDLSPFLAATLILNGIQPVLSG 343

Query: 292 VAVGAGWQATVAYVNIVSYYLVGLTTGAILGFKFHFGLQGLWSGVILGIALQTVILVVMT 113
           VAVG GWQA VAYVN+  YYL+G+  G +LGF F  G +G+WSG++ G  LQT+ILV +T
Sbjct: 344 VAVGCGWQAFVAYVNVGCYYLIGVPVGVVLGFTFDLGAKGIWSGMLGGTVLQTIILVWVT 403

Query: 112 LRTDWEKEAALAKVRISTWE 53
           LRTDW+KE   AK R+S+W+
Sbjct: 404 LRTDWDKEVESAKNRLSSWD 423


>gb|ABR16195.1| unknown [Picea sitchensis]
          Length = 500

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/146 (50%), Positives = 103/146 (70%), Gaps = 6/146 (4%)
 Frame = -1

Query: 463 SMSLVIETTFVV------IILATRNKFPSLFTENKLVMEEASKLAIFLSMSIILCSVQPV 302
           S+ +V+ TTF+V      II  TRN+F   FT++K+VM   ++LA  L+ +++L SVQPV
Sbjct: 355 SVIVVVGTTFLVGVVLMAIIFITRNEFAVAFTDSKVVMSAVAQLAPLLAFTMLLNSVQPV 414

Query: 301 LSGVAVGAGWQATVAYVNIVSYYLVGLTTGAILGFKFHFGLQGLWSGVILGIALQTVILV 122
           LSGVA+GAGWQA VAY+N+  YYL G+  G +LG+ F  G++G+W+G+I G  LQT+IL 
Sbjct: 415 LSGVAIGAGWQALVAYINLACYYLFGVPLGCLLGYYFDLGVEGIWAGMISGTLLQTIILC 474

Query: 121 VMTLRTDWEKEAALAKVRISTWESST 44
           ++T RT W KEA  AK RI+ W  +T
Sbjct: 475 IITYRTKWNKEANQAKARITLWGGAT 500


>ref|NP_001062056.1| Os08g0480000 [Oryza sativa Japonica Group]
           gi|42408579|dbj|BAD09756.1| putative ripening regulated
           protein [Oryza sativa Japonica Group]
           gi|113624025|dbj|BAF23970.1| Os08g0480000 [Oryza sativa
           Japonica Group] gi|215695384|dbj|BAG90575.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 489

 Score =  149 bits (375), Expect = 3e-34
 Identities = 71/142 (50%), Positives = 102/142 (71%)
 Frame = -1

Query: 472 VMVSMSLVIETTFVVIILATRNKFPSLFTENKLVMEEASKLAIFLSMSIILCSVQPVLSG 293
           V V+ S+ I   F  +I+A  +K   LF+ +K+V++  S L++ L+ +++L SVQPVLSG
Sbjct: 347 VSVTTSVAIGLVFWCLIIAYNDKIALLFSSSKVVLDAVSDLSVLLAFTVLLNSVQPVLSG 406

Query: 292 VAVGAGWQATVAYVNIVSYYLVGLTTGAILGFKFHFGLQGLWSGVILGIALQTVILVVMT 113
           VA+G+GWQA VAYVN+ SYYLVG+  GAILG+  HFG+ G+WSG+I G A+QT+IL  +T
Sbjct: 407 VAIGSGWQALVAYVNVGSYYLVGVPIGAILGWPLHFGVGGIWSGLIGGTAVQTLILAYLT 466

Query: 112 LRTDWEKEAALAKVRISTWESS 47
           +  DW++EA  A  R+  W SS
Sbjct: 467 ISCDWDEEAKKASTRMEVWASS 488


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