BLASTX nr result

ID: Coptis23_contig00001512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001512
         (3392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]   204   1e-49
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]   202   4e-49
emb|CAN75944.1| hypothetical protein VITISV_040742 [Vitis vinifera]   202   5e-49
emb|CAN78985.1| hypothetical protein VITISV_038307 [Vitis vinifera]   202   7e-49
emb|CAN78776.1| hypothetical protein VITISV_029750 [Vitis vinifera]   202   7e-49

>emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]
          Length = 843

 Score =  204 bits (520), Expect = 1e-49
 Identities = 108/291 (37%), Positives = 155/291 (53%), Gaps = 1/291 (0%)
 Frame = -1

Query: 3392 GGLGLRDMSSFNQALLGKWLWRFGEERQSLWRRVIVSRFGETHFGWDSGSVRISYGCGVW 3213
            GGLGLR +  FN ALLGKWLWRF  ER+S WR+VIV +FGE   GW +  VR SYG  +W
Sbjct: 490  GGLGLRHLKEFNHALLGKWLWRFSLERESFWRKVIVGKFGEGEGGWTTREVRESYGMSLW 549

Query: 3212 RGILNVFPMFLKGVRYKLGLGDKILFWEDSWLEGGSLANGYPLLFGLSSFKGKPVTDCMV 3033
            + I   +  F       +G G    FW D W     L   +PLLFG++S     V D   
Sbjct: 550  KDIRKGWEEFFLKTSICIGNGRCTRFWWDYWAGESKLKELFPLLFGIASHNSALVADLWG 609

Query: 3032 RT-EVGISWNLGLRRALNDWEIDALASLMARLDALPSVTQNCDKRVWYPSKKGIFSVKSF 2856
            R  + G  W +  RR  +DWE+  ++  ++ + A+  V +  D  +W   +KG FSVKS+
Sbjct: 610  RQGDGGGGWEVHFRRPFHDWELGEVSRFLSHISAI-KVQEGEDSLIWKIERKGKFSVKSY 668

Query: 2855 YFSIPTWSNSHNRCAPIPSFPSLVIWGAKVSTKISFFAWTVSLERILTIDNLRKRKKIIV 2676
            Y S+   +N        P FP+  +WG++   +  FFAW     +I T+D L +R   +V
Sbjct: 669  YRSLKVENN--------PLFPAKEVWGSRAPLRTRFFAWEAMWGKISTVDMLMRRGWSMV 720

Query: 2675 NYCQLCRKDGESVNHVLLECSFSWNIWSSFHLESCFYWVSPGRVVDLLKGW 2523
            N C LC+++ ES +H+L+ C  +  +W+         WV P  V +LL  W
Sbjct: 721  NRCVLCKENEESTDHILIHCGKTRELWTVVLSSFGVVWVFPNSVRNLLLEW 771


>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
          Length = 1201

 Score =  202 bits (515), Expect = 4e-49
 Identities = 111/291 (38%), Positives = 154/291 (52%), Gaps = 1/291 (0%)
 Frame = -1

Query: 3392 GGLGLRDMSSFNQALLGKWLWRFGEERQSLWRRVIVSRFGETHFGWDSGSVRISYGCGVW 3213
            GGLGLR +  FN ALLGKWLWRF  ER+SLWRRVIV +FGE   GW +  VR SYG G+W
Sbjct: 840  GGLGLRYLKDFNHALLGKWLWRFPIERESLWRRVIVGKFGEVQGGWTTREVRESYGTGLW 899

Query: 3212 RGILNVFPMFLKGVRYKLGLGDKILFWEDSWLEGGSLANGYPLLFGLSSFKGKPVTDCMV 3033
            + I   +  F    R  +G G +  FW D W+    L + +PLLF +++     V D   
Sbjct: 900  KDIRKGWEEFFLRTRIHIGNGRRTRFWWDMWVGDSKLKDLFPLLFRIAANNSAIVADLWG 959

Query: 3032 RTE-VGISWNLGLRRALNDWEIDALASLMARLDALPSVTQNCDKRVWYPSKKGIFSVKSF 2856
            R E  G  W +  RR   DWE++ +   +  + A+  V +  D  VW   +KG F V S+
Sbjct: 960  RQEGGGGGWEVHFRRPFQDWELEEVNRFLGYISAV-RVQEGEDFLVWKIERKGTFKVNSY 1018

Query: 2855 YFSIPTWSNSHNRCAPIPSFPSLVIWGAKVSTKISFFAWTVSLERILTIDNLRKRKKIIV 2676
            Y S+    NS       P FP   +WG+    +  FFAW     +I TID L +R   + 
Sbjct: 1019 YRSLKE-DNS-------PLFPXKEVWGSYAPLRTRFFAWEAVWGKISTIDMLMRRGWSMA 1070

Query: 2675 NYCQLCRKDGESVNHVLLECSFSWNIWSSFHLESCFYWVSPGRVVDLLKGW 2523
            N C LC+++ E+ NH+L+ C  + ++W+         WV P  V +LL  W
Sbjct: 1071 NRCNLCKENEETANHILIHCGKTRDLWNLLFSSFGVVWVLPDSVRNLLLEW 1121


>emb|CAN75944.1| hypothetical protein VITISV_040742 [Vitis vinifera]
          Length = 464

 Score =  202 bits (514), Expect = 5e-49
 Identities = 101/290 (34%), Positives = 162/290 (55%)
 Frame = -1

Query: 3392 GGLGLRDMSSFNQALLGKWLWRFGEERQSLWRRVIVSRFGETHFGWDSGSVRISYGCGVW 3213
            GGLGLR ++  N+ALLGKW+WRF   ++ LW++V+ +++G+   GW +     ++G GVW
Sbjct: 108  GGLGLRKITLLNKALLGKWIWRFACAKEELWKKVLEAKYGKEELGWRTRKANGAFGVGVW 167

Query: 3212 RGILNVFPMFLKGVRYKLGLGDKILFWEDSWLEGGSLANGYPLLFGLSSFKGKPVTDCMV 3033
            + IL       + + +K+G G++I FW D W     L+ G+P LF +++ +   V +C  
Sbjct: 168  KEILKESTWCWENMGFKVGKGNRIRFWTDLWCGNMVLSQGFPNLFSMAAHRNVTVEECWD 227

Query: 3032 RTEVGISWNLGLRRALNDWEIDALASLMARLDALPSVTQNCDKRVWYPSKKGIFSVKSFY 2853
            +      WNLGL R LNDWE+  + +L+A L    SV    D   W   + G+F VK  Y
Sbjct: 228  QNTGQGGWNLGLLRDLNDWEVGLVGNLLAVLRDY-SVNVEDDLVCWKKGEDGLFKVKYAY 286

Query: 2852 FSIPTWSNSHNRCAPIPSFPSLVIWGAKVSTKISFFAWTVSLERILTIDNLRKRKKIIVN 2673
              +   +NS       P FP   +W  K+ TKI+FFAW  +  ++LT+D L++R   ++N
Sbjct: 287  NVL---ANSQG-----PDFPHNNVWVGKIPTKIAFFAWEATWGKVLTLDRLQRRGWHLLN 338

Query: 2672 YCQLCRKDGESVNHVLLECSFSWNIWSSFHLESCFYWVSPGRVVDLLKGW 2523
             C LC  + E++NH+L+ C+ +  +W+         WV P  V ++L  W
Sbjct: 339  RCFLCGCEEETINHILIHCTVAKGLWNIILALCGVQWVFPNSVEEVLSSW 388


>emb|CAN78985.1| hypothetical protein VITISV_038307 [Vitis vinifera]
          Length = 489

 Score =  202 bits (513), Expect = 7e-49
 Identities = 109/291 (37%), Positives = 156/291 (53%), Gaps = 1/291 (0%)
 Frame = -1

Query: 3392 GGLGLRDMSSFNQALLGKWLWRFGEERQSLWRRVIVSRFGETHFGWDSGSVRISYGCGVW 3213
            GGLGLR +  FN ALLGKWLWRF  ER+S WRRVIV +FGE   GW +  VR SYG G+W
Sbjct: 22   GGLGLRYLKDFNHALLGKWLWRFPIERESFWRRVIVGKFGEVQGGWTTREVRESYGTGLW 81

Query: 3212 RGILNVFPMFLKGVRYKLGLGDKILFWEDSWLEGGSLANGYPLLFGLSSFKGKPVTDCMV 3033
            + I   +  F    R ++G G +  FW D W+    L + +PLLF +++     V D   
Sbjct: 82   KDIRKGWEEFFLRTRIRIGNGTRTRFWWDIWVGDSKLKDLFPLLFRIAANNSAVVADLWG 141

Query: 3032 RTE-VGISWNLGLRRALNDWEIDALASLMARLDALPSVTQNCDKRVWYPSKKGIFSVKSF 2856
            R E  G  W +  RR   DWE++ +   +  + A+  V +  D  VW   +KG F +KS+
Sbjct: 142  RQEGGGGGWEVHFRRPFQDWELEEVNRFLGYISAV-KVQEGEDFLVWKIERKGTFKIKSY 200

Query: 2855 YFSIPTWSNSHNRCAPIPSFPSLVIWGAKVSTKISFFAWTVSLERILTIDNLRKRKKIIV 2676
            Y S+    NS       P FP+  +WG+    +  FFAW     +I T+D L +R   +V
Sbjct: 201  YRSLKE-DNS-------PLFPAKEVWGSYAPLRTRFFAWEAVWGKISTVDMLMRRGWSMV 252

Query: 2675 NYCQLCRKDGESVNHVLLECSFSWNIWSSFHLESCFYWVSPGRVVDLLKGW 2523
            N C LC+++ E+ NH+L+ C  + ++W+         WV    V +LL  W
Sbjct: 253  NRCNLCKENEETANHILIHCGKTRDLWNLLFSLFGVVWVLSESVRNLLLEW 303


>emb|CAN78776.1| hypothetical protein VITISV_029750 [Vitis vinifera]
          Length = 763

 Score =  202 bits (513), Expect = 7e-49
 Identities = 108/295 (36%), Positives = 159/295 (53%)
 Frame = -1

Query: 3392 GGLGLRDMSSFNQALLGKWLWRFGEERQSLWRRVIVSRFGETHFGWDSGSVRISYGCGVW 3213
            GGLG+R +   N+ALLGKW+WRF  E    WR+V+  ++G+  FGW +   R ++G GVW
Sbjct: 407  GGLGIRKIDLLNKALLGKWIWRFAFEEDMFWRKVVGVKYGQLGFGWRTKEARGTFGVGVW 466

Query: 3212 RGILNVFPMFLKGVRYKLGLGDKILFWEDSWLEGGSLANGYPLLFGLSSFKGKPVTDCMV 3033
            R IL       + +++K+G G K+ FW D W     L+  +P LF L++ +   V +   
Sbjct: 467  REILKESSWCWENIKFKVGKGTKVSFWTDHWCGNEVLSQAFPQLFTLAAHRSASVNEMWD 526

Query: 3032 RTEVGISWNLGLRRALNDWEIDALASLMARLDALPSVTQNCDKRVWYPSKKGIFSVKSFY 2853
             +     WN+ L R  NDWE+DAL  L+  L  L  ++   D  +W     G F ++  Y
Sbjct: 527  SSLGQGGWNIRLSRNSNDWELDALGELLHMLRDL-RISLEEDAVIWKGEGHGRFQIRDAY 585

Query: 2852 FSIPTWSNSHNRCAPIPSFPSLVIWGAKVSTKISFFAWTVSLERILTIDNLRKRKKIIVN 2673
              + T SN       + +FP   IW  KV TK++FFAW  S E++LT+D L++R   + N
Sbjct: 586  -KLLTGSN-------VTTFPERSIWVDKVPTKVAFFAWEASWEKLLTLDKLQRRGWQLPN 637

Query: 2672 YCQLCRKDGESVNHVLLECSFSWNIWSSFHLESCFYWVSPGRVVDLLKGWGHGPF 2508
             C LC  D E+VNH+LL C+    +W          WV P +V ++L  W  GPF
Sbjct: 638  RCFLCGCDEENVNHILLHCTVVRPLWEIVLALFGANWVFPEKVKEMLVSW-RGPF 691



 Score =  100 bits (249), Expect = 3e-18
 Identities = 47/138 (34%), Positives = 79/138 (57%)
 Frame = -1

Query: 3392 GGLGLRDMSSFNQALLGKWLWRFGEERQSLWRRVIVSRFGETHFGWDSGSVRISYGCGVW 3213
            GGLGLR +   N+ALLGKW+WRF  E+++LW++V+++++G+   GW +  V  ++G GVW
Sbjct: 55   GGLGLRKLVPLNKALLGKWIWRFACEKENLWKQVLLAKYGQEGLGWRTKKVNGAFGIGVW 114

Query: 3212 RGILNVFPMFLKGVRYKLGLGDKILFWEDSWLEGGSLANGYPLLFGLSSFKGKPVTDCMV 3033
            + IL       + + + +G G KI FW D W     L+  +P L+ +++ +   V +   
Sbjct: 115  KEILKENDWCWENMEFTVGNGTKIRFWIDLWRGCIVLSQRFPHLYVMAAHRNATVEEMWD 174

Query: 3032 RTEVGISWNLGLRRALND 2979
            +      W+L   R  ND
Sbjct: 175  QNVGQRGWDLRFMRDFND 192


Top