BLASTX nr result
ID: Coptis23_contig00001510
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001510
(2366 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 783 0.0
gb|ABK92556.1| unknown [Populus trichocarpa] 782 0.0
ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putativ... 781 0.0
ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 777 0.0
ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 777 0.0
>ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 16, partial [Vitis
vinifera]
Length = 545
Score = 783 bits (2023), Expect = 0.0
Identities = 400/505 (79%), Positives = 440/505 (87%), Gaps = 1/505 (0%)
Frame = -2
Query: 1900 EGKDVVARAKTGSGKTYAYLLPLLQKLFSDSSSTLKTAPSVFVLVPTRELSQQVYSEVLS 1721
EGKDVVARAKTGSGKT+AYLLPLLQKLFS+S S K APS FVLVPTREL QQVYSEVLS
Sbjct: 3 EGKDVVARAKTGSGKTFAYLLPLLQKLFSESESRNKLAPSAFVLVPTRELCQQVYSEVLS 62
Query: 1720 LIESCRVQLKVVQLTGGMPASDLRATLAGRPDILVSTPACISTCMSTNALSTKSIQDSLS 1541
LIE CR QLKVVQLT M SDLR LAG PDILVSTP CI C+S L SI +SL
Sbjct: 63 LIELCRGQLKVVQLTSSMSPSDLRVALAGPPDILVSTPGCIPKCLSAGVLQAASINESLE 122
Query: 1540 ILVLDEADLLLSYGYEDDLKSLIPHVPRGCQCLLMSATSSADVDKLKTLVLHNPITLTLP 1361
ILVLDEADLLLSYGYEDDLK+L HVPR CQCLLMSATSSADV+KLK L+LHNP LTLP
Sbjct: 123 ILVLDEADLLLSYGYEDDLKALTAHVPRRCQCLLMSATSSADVEKLKKLILHNPFILTLP 182
Query: 1360 EIGDSKDEIIPKNVQQFWISCSSRDKLLYILALLKFELVQKKVLVFVNAIGMGFRLRLFL 1181
E+GD KDEIIPKNVQQFWISCS+RDKLLYILALLK ELVQKK+L+F N+I M FRL+LFL
Sbjct: 183 EVGDGKDEIIPKNVQQFWISCSARDKLLYILALLKLELVQKKILIFTNSIDMAFRLKLFL 242
Query: 1180 EQFGMRSVVLNAELPQNSRLHILEEFNAGLFDYLIATDDNQTKD-EQVNKDTDVASTKSK 1004
E+FG++S VLNAELPQNSRLHILEEFNAGLFDYLIATD +Q K+ EQ ++ + + KS+
Sbjct: 243 EKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDGSQPKEKEQADEGSQIEPRKSR 302
Query: 1003 RQRRQKLDSEFGVVRGIDFKNVYTVINFDMPQTAAAYVHRIGRTGRAYNTGASVSLVSSD 824
+ +QKLDSEFGVVRGIDFKNV+TVINF+MPQ A YVHRIGRTGRAYNTGASVSLVS D
Sbjct: 303 KHSKQKLDSEFGVVRGIDFKNVHTVINFEMPQNAPGYVHRIGRTGRAYNTGASVSLVSPD 362
Query: 823 EMEVFEEIKSTLGDNENSSSNFIAPFPLLSKNAVESLRYRAEDVAKSVTKVAVRESRAQD 644
EME+ EEIKS LGD+EN SNFIAPFPLL+KNAVESLRYRAEDV+KSVTK+AVRESRAQD
Sbjct: 363 EMEILEEIKSILGDDENKESNFIAPFPLLTKNAVESLRYRAEDVSKSVTKLAVRESRAQD 422
Query: 643 LRNEIINSEKLKAHFEHNPRDLDLLKHDKVLSKKPPPGHLRAIPEYLLDPTTQEASKILK 464
LRNEI+NSEKLKAHFE N RDLDLLKHDKVLSKKP P HLR +P+YLLDPTTQEASKI+K
Sbjct: 423 LRNEIVNSEKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIVK 482
Query: 463 LARAAMGNNNSSRRQGSKRRFKKIR 389
LARAAMGN N +RRQGS+R+F+K R
Sbjct: 483 LARAAMGNTNPARRQGSRRKFRKSR 507
>gb|ABK92556.1| unknown [Populus trichocarpa]
Length = 619
Score = 782 bits (2020), Expect = 0.0
Identities = 402/537 (74%), Positives = 460/537 (85%), Gaps = 4/537 (0%)
Frame = -2
Query: 1993 LGLDPRLIRSLTKKDIS--KPTPIQCVAIPLILEGKDVVARAKTGSGKTYAYLLPLLQKL 1820
LGLDPRLIR+L KK+IS +PTPIQ AIPLIL+GKDVVARAKTGSGKT AYLLPLLQKL
Sbjct: 43 LGLDPRLIRALNKKEISIAEPTPIQRAAIPLILQGKDVVARAKTGSGKTLAYLLPLLQKL 102
Query: 1819 FSDSSSTLKT-APSVFVLVPTRELSQQVYSEVLSLIESCRVQLKVVQLTGGMPASDLRAT 1643
S + S K +PS F+LVP+ EL QQVY EV SLI+SC+ QLKVVQLT MPASDLR
Sbjct: 103 LSTADSNRKKLSPSAFILVPSGELCQQVYKEVSSLIDSCKAQLKVVQLTSNMPASDLRNA 162
Query: 1642 LAGRPDILVSTPACISTCMSTNALSTKSIQDSLSILVLDEADLLLSYGYEDDLKSLIPHV 1463
LAG PDILVSTP+C++ +S L ++SI DSL ILVLDEADLLLS+GYE+DLK+L V
Sbjct: 163 LAGPPDILVSTPSCVAKSLSVGVLKSESINDSLEILVLDEADLLLSFGYEEDLKALTALV 222
Query: 1462 PRGCQCLLMSATSSADVDKLKTLVLHNPITLTLPEIGDSKDEIIPKNVQQFWISCSSRDK 1283
PR CQCLLMSATSSADVDKLK LVLHNP LTLPE+ KDE+IPKNVQQFW+SC RDK
Sbjct: 223 PRRCQCLLMSATSSADVDKLKKLVLHNPYVLTLPEVEGVKDEVIPKNVQQFWVSCGDRDK 282
Query: 1282 LLYILALLKFELVQKKVLVFVNAIGMGFRLRLFLEQFGMRSVVLNAELPQNSRLHILEEF 1103
L++ILALLK +LVQKKVL+F NAI M FRL+LFLE+FG++S VLNAELPQNSRLHILEEF
Sbjct: 283 LVHILALLKLDLVQKKVLIFTNAIDMSFRLKLFLEKFGIKSAVLNAELPQNSRLHILEEF 342
Query: 1102 NAGLFDYLIATDDNQTKDEQVNKDTDVAST-KSKRQRRQKLDSEFGVVRGIDFKNVYTVI 926
NAGLFDYLIATDD +TK+++ + +A T KSK+ +QKLDSEFGVVRGIDFKNV+TVI
Sbjct: 343 NAGLFDYLIATDDRETKEKEKANEGSLAETRKSKKHAKQKLDSEFGVVRGIDFKNVHTVI 402
Query: 925 NFDMPQTAAAYVHRIGRTGRAYNTGASVSLVSSDEMEVFEEIKSTLGDNENSSSNFIAPF 746
N+DMP +A YVHRIGRTGRAY+TG+SVSLVS DEME+ EEIKS LGD+EN+ SN I+P+
Sbjct: 403 NYDMPLSATGYVHRIGRTGRAYSTGSSVSLVSPDEMEILEEIKSFLGDDENNESNVISPY 462
Query: 745 PLLSKNAVESLRYRAEDVAKSVTKVAVRESRAQDLRNEIINSEKLKAHFEHNPRDLDLLK 566
PLL+KNAVESLRYRAED AKSVTK+AVRE+RAQDLRNEI+NSEKLKAHFE NPRDLDLLK
Sbjct: 463 PLLTKNAVESLRYRAEDTAKSVTKIAVREARAQDLRNEILNSEKLKAHFEVNPRDLDLLK 522
Query: 565 HDKVLSKKPPPGHLRAIPEYLLDPTTQEASKILKLARAAMGNNNSSRRQGSKRRFKK 395
HDKVLSKKPP HL +P+YLLD TT+EASK++KLARAAMGNNNS RRQG KR F+K
Sbjct: 523 HDKVLSKKPPAPHLSDVPDYLLDATTKEASKMVKLARAAMGNNNSGRRQGPKRNFRK 579
>ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223529859|gb|EEF31791.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 616
Score = 781 bits (2018), Expect = 0.0
Identities = 397/536 (74%), Positives = 459/536 (85%), Gaps = 3/536 (0%)
Frame = -2
Query: 1993 LGLDPRLIRSLTKKDIS--KPTPIQCVAIPLILEGKDVVARAKTGSGKTYAYLLPLLQKL 1820
LGLDPRLIR+L KK+IS KPTPIQ VAIPLILEGKDVVARAKTGSGKT AYLLPLLQKL
Sbjct: 41 LGLDPRLIRALNKKEISIRKPTPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQKL 100
Query: 1819 FSDSSSTLKTAPSVFVLVPTRELSQQVYSEVLSLIESCRVQLKVVQLTGGMPASDLRATL 1640
FSDS S K APS F+LVP+ EL QQVY EV +LI+ C+VQLK VQLT M SDLR +
Sbjct: 101 FSDSGSKKKLAPSAFILVPSGELCQQVYKEVSALIDWCKVQLKAVQLTSKMSGSDLRTAI 160
Query: 1639 AGRPDILVSTPACISTCMSTNALSTKSIQDSLSILVLDEADLLLSYGYEDDLKSLIPHVP 1460
AG PDIL+S+PA ++ C+S L + SI DSL ILVLDEADLLLS+GYEDDL++L +P
Sbjct: 161 AGPPDILISSPASLAKCLSVGLLQSASINDSLEILVLDEADLLLSFGYEDDLRALTALIP 220
Query: 1459 RGCQCLLMSATSSADVDKLKTLVLHNPITLTLPEIGDSKDEIIPKNVQQFWISCSSRDKL 1280
R CQCLLMSATSS DVDKLK L+LHNP LTLPE+ +KDE IPKNVQQFWISCS RDKL
Sbjct: 221 RRCQCLLMSATSSDDVDKLKKLMLHNPYILTLPEVEGNKDEAIPKNVQQFWISCSGRDKL 280
Query: 1279 LYILALLKFELVQKKVLVFVNAIGMGFRLRLFLEQFGMRSVVLNAELPQNSRLHILEEFN 1100
++ILALLK +LVQKKVL+F N+I M FRLRLFLE+FG++S +LNAELPQNSRLHILEEFN
Sbjct: 281 VHILALLKLDLVQKKVLIFTNSIDMSFRLRLFLEKFGIKSAILNAELPQNSRLHILEEFN 340
Query: 1099 AGLFDYLIATDDNQTKD-EQVNKDTDVASTKSKRQRRQKLDSEFGVVRGIDFKNVYTVIN 923
AGLFDYLIATDD++TK+ EQ D ++A ++ ++ +QKLDSEFGVVRGIDFKNV+TV+N
Sbjct: 341 AGLFDYLIATDDSETKEKEQEQADRNLAQSRKSKKSKQKLDSEFGVVRGIDFKNVHTVVN 400
Query: 922 FDMPQTAAAYVHRIGRTGRAYNTGASVSLVSSDEMEVFEEIKSTLGDNENSSSNFIAPFP 743
+DMP AA YVHRIGRTGR YN+G+SVSLVS DEME+ E++KS LGD+EN SN IAPFP
Sbjct: 401 YDMPLNAAGYVHRIGRTGRGYNSGSSVSLVSPDEMEILEDVKSFLGDDENKDSNIIAPFP 460
Query: 742 LLSKNAVESLRYRAEDVAKSVTKVAVRESRAQDLRNEIINSEKLKAHFEHNPRDLDLLKH 563
LL+KNAVESLRYRAEDVAKSVTK+AV+E+RAQDLRNEI+NSEKLKAHFE NPRDLDLLKH
Sbjct: 461 LLTKNAVESLRYRAEDVAKSVTKIAVKEARAQDLRNEILNSEKLKAHFEANPRDLDLLKH 520
Query: 562 DKVLSKKPPPGHLRAIPEYLLDPTTQEASKILKLARAAMGNNNSSRRQGSKRRFKK 395
DKVLSK PP HLR +P+YL+D TT+EASK++KLARAAMG NN SRRQGSK++F K
Sbjct: 521 DKVLSKNPPAPHLRDVPDYLMDATTKEASKMVKLARAAMGKNNPSRRQGSKKKFIK 576
>ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
sativus] gi|449508529|ref|XP_004163338.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
sativus]
Length = 596
Score = 777 bits (2007), Expect = 0.0
Identities = 388/530 (73%), Positives = 456/530 (86%)
Frame = -2
Query: 1993 LGLDPRLIRSLTKKDISKPTPIQCVAIPLILEGKDVVARAKTGSGKTYAYLLPLLQKLFS 1814
LGLDPRL+R+L KK+I KPTPIQ VAIPLILEGKDVVARAKTGSGKT+AYLLPLLQKLF+
Sbjct: 26 LGLDPRLVRALIKKEIQKPTPIQHVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFT 85
Query: 1813 DSSSTLKTAPSVFVLVPTRELSQQVYSEVLSLIESCRVQLKVVQLTGGMPASDLRATLAG 1634
SS+ K+ PS VLVPTRELSQQVY E+ SLIE+CRVQ+KV QLT M SDLR LAG
Sbjct: 86 GSSTKKKSGPSAVVLVPTRELSQQVYKEISSLIETCRVQVKVAQLTSSMSHSDLRTALAG 145
Query: 1633 RPDILVSTPACISTCMSTNALSTKSIQDSLSILVLDEADLLLSYGYEDDLKSLIPHVPRG 1454
PDI+V+TPACI C+S L SI +SL ILVLDEADLLLSYGYEDD+K+ HVPR
Sbjct: 146 PPDIIVATPACIPKCLSAGVLQPTSINESLEILVLDEADLLLSYGYEDDIKAFAAHVPRS 205
Query: 1453 CQCLLMSATSSADVDKLKTLVLHNPITLTLPEIGDSKDEIIPKNVQQFWISCSSRDKLLY 1274
CQCLLMSATSS DV+KLK L+LHNP LTLPE+GD KD++IPKNVQQF ISC +RDKLL+
Sbjct: 206 CQCLLMSATSSEDVEKLKKLILHNPFILTLPEVGDVKDDLIPKNVQQFSISCDARDKLLH 265
Query: 1273 ILALLKFELVQKKVLVFVNAIGMGFRLRLFLEQFGMRSVVLNAELPQNSRLHILEEFNAG 1094
IL+LLK +LVQKKVL+F N+I MGFRL+LFLE+FG++S +LNAELPQNSRLHILEEFNAG
Sbjct: 266 ILSLLKLDLVQKKVLIFTNSIDMGFRLKLFLEKFGIKSAILNAELPQNSRLHILEEFNAG 325
Query: 1093 LFDYLIATDDNQTKDEQVNKDTDVASTKSKRQRRQKLDSEFGVVRGIDFKNVYTVINFDM 914
LFDYLIATDD+QTK+++ N++ +V KS+++ +QK+DSEFGVVRGIDFKNVYTVINF++
Sbjct: 326 LFDYLIATDDSQTKEKEANEEGNVDKRKSRKRAKQKIDSEFGVVRGIDFKNVYTVINFEL 385
Query: 913 PQTAAAYVHRIGRTGRAYNTGASVSLVSSDEMEVFEEIKSTLGDNENSSSNFIAPFPLLS 734
P +A+ Y+HRIGRTGRAYNTGAS+SLVS DEM+ FEEI+S L + ++ I PFPLL+
Sbjct: 386 PPSASGYIHRIGRTGRAYNTGASISLVSPDEMDNFEEIQSFL--RADGDTDIIVPFPLLT 443
Query: 733 KNAVESLRYRAEDVAKSVTKVAVRESRAQDLRNEIINSEKLKAHFEHNPRDLDLLKHDKV 554
KNAVESLRYRAEDV+KSVTK+A+RESRA DLRNEI+NSEKLKAHFE NP+DLDLLKHDK+
Sbjct: 444 KNAVESLRYRAEDVSKSVTKLAIRESRALDLRNEILNSEKLKAHFESNPKDLDLLKHDKI 503
Query: 553 LSKKPPPGHLRAIPEYLLDPTTQEASKILKLARAAMGNNNSSRRQGSKRR 404
LSK PP HLR +P+YL+DP TQEASKI+KLARAAMGN S RR+G KR+
Sbjct: 504 LSKNPPAPHLRDVPDYLVDPVTQEASKIIKLARAAMGNVQSGRRRGFKRK 553
>ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Glycine max]
Length = 601
Score = 777 bits (2007), Expect = 0.0
Identities = 397/534 (74%), Positives = 456/534 (85%), Gaps = 1/534 (0%)
Frame = -2
Query: 1993 LGLDPRLIRSLTKKDISKPTPIQCVAIPLILEGKDVVARAKTGSGKTYAYLLPLLQKLFS 1814
LG+D RL+R+L KK I KPTPIQ VAIPLILEGKDVVARAKTGSGKT AYLLPLLQKLF+
Sbjct: 27 LGVDARLLRALIKKRIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQKLFT 86
Query: 1813 DSSSTLKTAPSVFVLVPTRELSQQVYSEVLSLIESCRVQLKVVQLTGGMPASDLRATLAG 1634
+S K AP+ FVLVPTRELSQQVY+EV SL+E CRVQLKVVQL M A+DLRA LAG
Sbjct: 87 ANSDRKKLAPNAFVLVPTRELSQQVYAEVKSLVELCRVQLKVVQLNSNMLANDLRAALAG 146
Query: 1633 RPDILVSTPACISTCMSTNALSTKSIQDSLSILVLDEADLLLSYGYEDDLKSLIPHVPRG 1454
PDIL+STPAC++ C+S L SI SL LVLDEADLLLSYGYE+D+K+L PHVPR
Sbjct: 147 PPDILISTPACVAKCLSCGVLQAASINASLETLVLDEADLLLSYGYENDIKALTPHVPRS 206
Query: 1453 CQCLLMSATSSADVDKLKTLVLHNPITLTLPEIGDSKDEIIPKNVQQFWISCSSRDKLLY 1274
CQCLLMSATSSADVDKLK L+LHNP LTLPE+G+ KDE+IPKNVQQFWISC + DKLLY
Sbjct: 207 CQCLLMSATSSADVDKLKKLILHNPFILTLPEVGNHKDEVIPKNVQQFWISCPASDKLLY 266
Query: 1273 ILALLKFELVQKKVLVFVNAIGMGFRLRLFLEQFGMRSVVLNAELPQNSRLHILEEFNAG 1094
ILA+LK LVQKKVL+F N I M FRL+LFLE+FG+RS VLN ELPQNSRLHILEEFNAG
Sbjct: 267 ILAVLKLGLVQKKVLIFTNTIDMSFRLKLFLEKFGIRSAVLNPELPQNSRLHILEEFNAG 326
Query: 1093 LFDYLIATDDNQTKD-EQVNKDTDVASTKSKRQRRQKLDSEFGVVRGIDFKNVYTVINFD 917
LFDYLIATD +Q+K+ ++V K++ V S KS++ + KLDSEFGVVRGIDFKNVYTVINF+
Sbjct: 327 LFDYLIATDLSQSKEKDEVPKESIVGSRKSRKHAKIKLDSEFGVVRGIDFKNVYTVINFE 386
Query: 916 MPQTAAAYVHRIGRTGRAYNTGASVSLVSSDEMEVFEEIKSTLGDNENSSSNFIAPFPLL 737
MPQ+ A YVHRIGRTGRAYN+GASVSLVS+DEM+ EEI+S +GD+EN +N IA FPLL
Sbjct: 387 MPQSVAGYVHRIGRTGRAYNSGASVSLVSTDEMDTLEEIRSFVGDDENKGTNSIAEFPLL 446
Query: 736 SKNAVESLRYRAEDVAKSVTKVAVRESRAQDLRNEIINSEKLKAHFEHNPRDLDLLKHDK 557
+KNAVESLRYRAEDVAKSVT++AVRESRAQDLRNEI+NSEKLK HFE NP+DLDLLKHDK
Sbjct: 447 TKNAVESLRYRAEDVAKSVTRIAVRESRAQDLRNEILNSEKLKTHFETNPKDLDLLKHDK 506
Query: 556 VLSKKPPPGHLRAIPEYLLDPTTQEASKILKLARAAMGNNNSSRRQGSKRRFKK 395
+LSK PP HLR +PEYLLD T+EA +++KLAR AMGNNN RR+GSKR+ +K
Sbjct: 507 ILSKNAPPPHLRDVPEYLLDKPTKEAREMVKLARDAMGNNN--RRKGSKRKLRK 558