BLASTX nr result

ID: Coptis23_contig00001501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001501
         (2235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513833.1| Mitogen-activated protein kinase kinase kina...   397   e-108
ref|XP_002276855.1| PREDICTED: clathrin heavy chain 2 [Vitis vin...   361   4e-97
sp|Q2QYW2.1|CLH2_ORYSJ RecName: Full=Clathrin heavy chain 2 gi|7...   357   8e-96
sp|Q2RBN7.1|CLH1_ORYSJ RecName: Full=Clathrin heavy chain 1 gi|7...   357   8e-96
tpg|DAA59151.1| TPA: hypothetical protein ZEAMMB73_931450, parti...   357   8e-96

>ref|XP_002513833.1| Mitogen-activated protein kinase kinase kinase, putative [Ricinus
            communis] gi|223546919|gb|EEF48416.1| Mitogen-activated
            protein kinase kinase kinase, putative [Ricinus communis]
          Length = 555

 Score =  397 bits (1021), Expect = e-108
 Identities = 246/511 (48%), Positives = 296/511 (57%), Gaps = 19/511 (3%)
 Frame = -3

Query: 2125 RRKPKLDRRNAIKNIDYEAPXXXXXXXXXSNDVGSLRTRSLDISPYAKTQTSFRIEGTEG 1946
            R +P+L+RRNA K+I+Y+A          S    SL TRSLD+       TSFRIEGT+G
Sbjct: 7    RSRPRLERRNAAKHIEYDATSSFSSLDASSCS-SSLVTRSLDLPE----GTSFRIEGTDG 61

Query: 1945 EIDRICYSLGLSGPDDLSIPTSLWESTRKSRSSELYFPKNEVGVEKDCFLSRFGSGE--- 1775
            E DRIC S+GL+GP+D  IPT+ WE+ +   +S+L  P++ + V     ++     E   
Sbjct: 62   EFDRICRSIGLTGPEDFEIPTAAWEAMKVRSASDL-LPRSRLYVSDSPRIAEAKHKEQEQ 120

Query: 1774 -------RVLDSGGS--------EKGVNLLPLNAGNGERGIXXXXXXXXXXXXXXXXXXL 1640
                   RVLD+  +        EK V  + LN   G  GI                  +
Sbjct: 121  EKSELCARVLDTVRTDDSTELTQEKQVQPVKLNVSGG--GIKGVRPPLLKPPPSMTLPVI 178

Query: 1639 DNLGSSWDILKSFAPDYDSKGGSY-SYRCLSXXXXXXXXXXXXXXVRMDGMIIEEDGGVR 1463
            D   S+WDIL+ FAP+ D +     +   LS                 +    ++D   R
Sbjct: 179  DKCCSTWDILRDFAPENDRRSSMLIAEGGLSSDDEEEVAAAINKGEEEEEEEDDDDNLSR 238

Query: 1462 FGETTLLSEXXXXXXXXXXXXXXXXXDPMYIISPNARFKRDIKSWTKGSLLGSGSFGTVY 1283
              E  +LSE                 + M  ISP+ RF+R I  W KG LLG GSFG+VY
Sbjct: 239  IREIGVLSESCSFTTSNDDDSSSTTTELMSNISPHERFRRMISDWEKGDLLGRGSFGSVY 298

Query: 1282 EGLSDDGFFFAVKEVSLLDQGSQAKQSIVQLEQEISLLSQFEHENIVQYLGTDKDEEKLY 1103
            EG++ DGFFFA+KEVSLLDQGSQ KQSI QLEQEI+LLSQFEHENIV+Y GTDKD+  LY
Sbjct: 299  EGIAHDGFFFAIKEVSLLDQGSQGKQSIYQLEQEIALLSQFEHENIVRYYGTDKDDSNLY 358

Query: 1102 IFLELVTKGSLAQLYQKYHLQDSQVSAYTRQILHGLTYLHDRNVLHRDIKCANILVDASG 923
            IFLELVT+GSL  LYQ+YHL+DSQVSAYTRQILHGL YLHDRNV+HRDIKCANILVDASG
Sbjct: 359  IFLELVTQGSLMNLYQRYHLRDSQVSAYTRQILHGLKYLHDRNVVHRDIKCANILVDASG 418

Query: 922  SVKLADFGLAKATKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKSHGYG 743
            SVKLADFGLAKATK                                       RK+HGYG
Sbjct: 419  SVKLADFGLAKATKL-------------------NDVKSCKGTAFWMAPEVVNRKTHGYG 459

Query: 742  LAADIWSLGCTVLEMLTRQVPYSHLESINFL 650
            L ADIWSLGCTVLEMLTRQVPYSHLE +  L
Sbjct: 460  LPADIWSLGCTVLEMLTRQVPYSHLECMQAL 490


>ref|XP_002276855.1| PREDICTED: clathrin heavy chain 2 [Vitis vinifera]
           gi|297745873|emb|CBI15929.3| unnamed protein product
           [Vitis vinifera]
          Length = 1705

 Score =  361 bits (927), Expect = 4e-97
 Identities = 176/231 (76%), Positives = 202/231 (87%)
 Frame = -2

Query: 698 VNSSSSLLSFGIYQLPGTTCDYLKIFDIEMDTEMRSHQMPKQIVFWQWITPKMLGLVTQT 519
           +N +S +L+    QLPGTT D+L+IF+IEM  +M+SHQMP+Q+VFW+WITPKMLGLVTQT
Sbjct: 73  MNPNSRILALKA-QLPGTTQDHLQIFNIEMKAKMKSHQMPEQVVFWKWITPKMLGLVTQT 131

Query: 518 SVYHWSIQGDSQPVKMFDRTANLTNNQIISYRCDPAEKWLVLIGIAPGTPERPQLIRGNM 339
           SV+HWSI+GDS+PVKMF+RTANL NNQII+YRCDP+EKWLVLIGIAPG+PERPQL++GNM
Sbjct: 132 SVFHWSIEGDSEPVKMFERTANLVNNQIINYRCDPSEKWLVLIGIAPGSPERPQLVKGNM 191

Query: 338 QLFSVDQQRSQALEAHGAAFASFKVPGNENPSTLICFASKTSNAGQLTSKLHVIELGAQP 159
           QLFSVDQQRSQALEAH A+FASFKV GNENPSTLICFASKT+NAGQ+TSKLHVIELGAQP
Sbjct: 192 QLFSVDQQRSQALEAHAASFASFKVLGNENPSTLICFASKTTNAGQITSKLHVIELGAQP 251

Query: 158 GKPAFTKKQXXXXXXXXXXXXXXXAMQISHKYGLIYVITKLGLLFVYDLET 6
           GKP FTKKQ               +MQ+S KYGLIYVITKLGLLFVYDLET
Sbjct: 252 GKPGFTKKQADLFFPPDFADDFPVSMQVSQKYGLIYVITKLGLLFVYDLET 302


>sp|Q2QYW2.1|CLH2_ORYSJ RecName: Full=Clathrin heavy chain 2 gi|77552802|gb|ABA95598.1|
           Clathrin heavy chain, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 1708

 Score =  357 bits (916), Expect = 8e-96
 Identities = 172/218 (78%), Positives = 193/218 (88%)
 Frame = -2

Query: 659 QLPGTTCDYLKIFDIEMDTEMRSHQMPKQIVFWQWITPKMLGLVTQTSVYHWSIQGDSQP 480
           Q+PGTT D+L+IF+IE  T+++SHQMP+Q+VFW+WITPK+LGLVTQTSVYHWSI+GDS+P
Sbjct: 85  QIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWITPKLLGLVTQTSVYHWSIEGDSEP 144

Query: 479 VKMFDRTANLTNNQIISYRCDPAEKWLVLIGIAPGTPERPQLIRGNMQLFSVDQQRSQAL 300
            KMFDRTANL NNQII+YRCDP+EKWLVLIGIAPG PERPQL++GNMQLFSVDQQRSQAL
Sbjct: 145 AKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGAPERPQLVKGNMQLFSVDQQRSQAL 204

Query: 299 EAHGAAFASFKVPGNENPSTLICFASKTSNAGQLTSKLHVIELGAQPGKPAFTKKQXXXX 120
           EAH A+FASFKV GNENPSTLICFASKT+NAGQ+TSKLHVIELGAQPGKP F+KKQ    
Sbjct: 205 EAHAASFASFKVVGNENPSTLICFASKTTNAGQITSKLHVIELGAQPGKPGFSKKQADLF 264

Query: 119 XXXXXXXXXXXAMQISHKYGLIYVITKLGLLFVYDLET 6
                      AMQIS KYGLIYVITKLGLLFVYDLET
Sbjct: 265 FPPDFQDDFPVAMQISQKYGLIYVITKLGLLFVYDLET 302


>sp|Q2RBN7.1|CLH1_ORYSJ RecName: Full=Clathrin heavy chain 1 gi|77548264|gb|ABA91061.1|
           Clathrin heavy chain, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 1708

 Score =  357 bits (916), Expect = 8e-96
 Identities = 172/218 (78%), Positives = 193/218 (88%)
 Frame = -2

Query: 659 QLPGTTCDYLKIFDIEMDTEMRSHQMPKQIVFWQWITPKMLGLVTQTSVYHWSIQGDSQP 480
           Q+PGTT D+L+IF+IE  T+++SHQMP+Q+VFW+WITPK+LGLVTQTSVYHWSI+GDS+P
Sbjct: 85  QIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWITPKLLGLVTQTSVYHWSIEGDSEP 144

Query: 479 VKMFDRTANLTNNQIISYRCDPAEKWLVLIGIAPGTPERPQLIRGNMQLFSVDQQRSQAL 300
            KMFDRTANL NNQII+YRCDP+EKWLVLIGIAPG PERPQL++GNMQLFSVDQQRSQAL
Sbjct: 145 AKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGAPERPQLVKGNMQLFSVDQQRSQAL 204

Query: 299 EAHGAAFASFKVPGNENPSTLICFASKTSNAGQLTSKLHVIELGAQPGKPAFTKKQXXXX 120
           EAH A+FASFKV GNENPSTLICFASKT+NAGQ+TSKLHVIELGAQPGKP F+KKQ    
Sbjct: 205 EAHAASFASFKVVGNENPSTLICFASKTTNAGQITSKLHVIELGAQPGKPGFSKKQADLF 264

Query: 119 XXXXXXXXXXXAMQISHKYGLIYVITKLGLLFVYDLET 6
                      AMQIS KYGLIYVITKLGLLFVYDLET
Sbjct: 265 FPPDFQDDFPVAMQISQKYGLIYVITKLGLLFVYDLET 302


>tpg|DAA59151.1| TPA: hypothetical protein ZEAMMB73_931450, partial [Zea mays]
          Length = 347

 Score =  357 bits (916), Expect = 8e-96
 Identities = 171/218 (78%), Positives = 194/218 (88%)
 Frame = -2

Query: 659 QLPGTTCDYLKIFDIEMDTEMRSHQMPKQIVFWQWITPKMLGLVTQTSVYHWSIQGDSQP 480
           Q+PGTT D+L+IF+IE  T+++SHQMP+Q+VFW+WITPK+LGLVTQTSVYHWSI+GDS+P
Sbjct: 85  QIPGTTQDHLQIFNIEAKTKVKSHQMPEQVVFWKWITPKLLGLVTQTSVYHWSIEGDSEP 144

Query: 479 VKMFDRTANLTNNQIISYRCDPAEKWLVLIGIAPGTPERPQLIRGNMQLFSVDQQRSQAL 300
           +KMFDRTANL NNQII+YRCDPAEKWLVLIGIAPG PERPQL++GNMQLFSVDQQRSQAL
Sbjct: 145 LKMFDRTANLANNQIINYRCDPAEKWLVLIGIAPGAPERPQLVKGNMQLFSVDQQRSQAL 204

Query: 299 EAHGAAFASFKVPGNENPSTLICFASKTSNAGQLTSKLHVIELGAQPGKPAFTKKQXXXX 120
           EAH A+FA+FKV GNENPSTLICFASKT+NAGQ+TSKLHVIELGAQPGKP F+KKQ    
Sbjct: 205 EAHAASFATFKVVGNENPSTLICFASKTTNAGQITSKLHVIELGAQPGKPGFSKKQADLF 264

Query: 119 XXXXXXXXXXXAMQISHKYGLIYVITKLGLLFVYDLET 6
                      AMQ+S KYGLIYVITKLGLLFVYDLET
Sbjct: 265 FPPDFQDDFPVAMQVSQKYGLIYVITKLGLLFVYDLET 302


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