BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001486
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...   426   e-117
ref|XP_003593177.1| Chloroplast chlorophyll a/b-binding protein ...   426   e-117
ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein C...   425   e-117
ref|XP_004140973.1| PREDICTED: chlorophyll a-b binding protein C...   419   e-115
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C...   419   e-115

>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score =  426 bits (1094), Expect = e-117
 Identities = 203/243 (83%), Positives = 226/243 (93%), Gaps = 4/243 (1%)
 Frame = -1

Query: 861 FLSGKKGTKCLLASSITGGRVGV-LSPRKFVI---SAQKKSWLPGVKAGGNLVDPEWLDG 694
           FLSG   ++ LLA+SI GG+VGV +SPR+ ++   +A KKSW+PGV+ GGNLVDPEWLDG
Sbjct: 17  FLSGGSRSQTLLATSI-GGKVGVAVSPRRLIVVAAAAPKKSWIPGVRGGGNLVDPEWLDG 75

Query: 693 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMTAVLGIFVGQAYSGIPWFEAGADPG 514
           SLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAM AVLGIFVGQA+SG+PWFEAGADP 
Sbjct: 76  SLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPN 135

Query: 513 AIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRTSENFANATGEQGYP 334
           AIAPFSFGSLLGTQLILMGWVESKRWVDFFNP+SQSVEWATPWS+T+ENFANATGEQGYP
Sbjct: 136 AIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFANATGEQGYP 195

Query: 333 GGKFFDPLSFAGTIQNGVYIPDEEKLERLKLAEIKHSRLAMVAMLIFYFEAGQGKTPLGV 154
           GGKFFDPL FAGT+++GVYIPD EKLERLKLAEIKH+R+AM+AMLIFYFEAGQGKTPLG 
Sbjct: 196 GGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGA 255

Query: 153 LGL 145
           LGL
Sbjct: 256 LGL 258


>ref|XP_003593177.1| Chloroplast chlorophyll a/b-binding protein CP24 [Medicago
           truncatula] gi|355482225|gb|AES63428.1| Chloroplast
           chlorophyll a/b-binding protein CP24 [Medicago
           truncatula]
          Length = 261

 Score =  426 bits (1094), Expect = e-117
 Identities = 202/245 (82%), Positives = 224/245 (91%), Gaps = 6/245 (2%)
 Frame = -1

Query: 861 FLSGKKGTKCLLASSITGGRVGVL--SPRKFVI----SAQKKSWLPGVKAGGNLVDPEWL 700
           FLSG K ++ LLA++  G +VGV   SP++ ++    SA KKSW+PGV+ GGNLVDPEWL
Sbjct: 17  FLSGGKRSQTLLATTAIGAKVGVAAGSPKRLIVAAAASAPKKSWIPGVRFGGNLVDPEWL 76

Query: 699 DGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMTAVLGIFVGQAYSGIPWFEAGAD 520
           DGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAM AVLGIFVGQA+SG+PWFEAGAD
Sbjct: 77  DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGAD 136

Query: 519 PGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRTSENFANATGEQG 340
           P AIAPFSFG+LLGTQLILMGWVESKRWVDFFNP+SQS+EWATPWS+T+ENFANATGEQG
Sbjct: 137 PNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSIEWATPWSKTAENFANATGEQG 196

Query: 339 YPGGKFFDPLSFAGTIQNGVYIPDEEKLERLKLAEIKHSRLAMVAMLIFYFEAGQGKTPL 160
           YPGGKFFDPLS AGTI+NGVYIPD EKLERLKLAEIKH+RLAM+AMLIFYFEAGQGKTPL
Sbjct: 197 YPGGKFFDPLSLAGTIENGVYIPDTEKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPL 256

Query: 159 GVLGL 145
           G LGL
Sbjct: 257 GALGL 261


>ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
           [Glycine max]
          Length = 261

 Score =  425 bits (1093), Expect = e-117
 Identities = 205/246 (83%), Positives = 225/246 (91%), Gaps = 7/246 (2%)
 Frame = -1

Query: 861 FLSGKKGTKCLLASSITGGRVGV----LSPRKFVI---SAQKKSWLPGVKAGGNLVDPEW 703
           FLSG   ++ LLA++I GG+VG     +SPR+ ++   +A KKSWLPGV+ GGNLVDPEW
Sbjct: 17  FLSGGNRSQTLLATAI-GGKVGAAAVTVSPRRLIVVAAAAPKKSWLPGVRGGGNLVDPEW 75

Query: 702 LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMTAVLGIFVGQAYSGIPWFEAGA 523
           LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM AVLGIFVGQA+SG+PWFEAGA
Sbjct: 76  LDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGA 135

Query: 522 DPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRTSENFANATGEQ 343
           DP AIAPFSFG+LLGTQLILMGWVESKRWVDFFNP+SQSVEWATPWSRTSENFANATGEQ
Sbjct: 136 DPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSRTSENFANATGEQ 195

Query: 342 GYPGGKFFDPLSFAGTIQNGVYIPDEEKLERLKLAEIKHSRLAMVAMLIFYFEAGQGKTP 163
           GYPGGKFFDPLS AGTI++GVYIPD EKLERLKLAEIKH+R+AM+AMLIFYFEAGQGKTP
Sbjct: 196 GYPGGKFFDPLSLAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTP 255

Query: 162 LGVLGL 145
           LG LGL
Sbjct: 256 LGALGL 261


>ref|XP_004140973.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
           chloroplastic-like [Cucumis sativus]
           gi|449497079|ref|XP_004160305.1| PREDICTED: chlorophyll
           a-b binding protein CP24 10A, chloroplastic-like
           [Cucumis sativus]
          Length = 255

 Score =  419 bits (1076), Expect = e-115
 Identities = 203/242 (83%), Positives = 217/242 (89%), Gaps = 3/242 (1%)
 Frame = -1

Query: 861 FLSGKKGTKCLLASSITGGRVGVLSPRKFVISAQ---KKSWLPGVKAGGNLVDPEWLDGS 691
           FL G   T+ LLA +   G V V+S  K VI A    KKSWLPGV+ GGNLVDPEWLDGS
Sbjct: 16  FLRGSSRTRTLLAGA--RGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGS 73

Query: 690 LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMTAVLGIFVGQAYSGIPWFEAGADPGA 511
           LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIFVGQA+SGIPWFEAGADPGA
Sbjct: 74  LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGA 133

Query: 510 IAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRTSENFANATGEQGYPG 331
           IAPFSFGSLLGTQL+LMGWVESKRWVDFFNPESQSVEWATPWSRT+ENFANATGEQGYPG
Sbjct: 134 IAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPG 193

Query: 330 GKFFDPLSFAGTIQNGVYIPDEEKLERLKLAEIKHSRLAMVAMLIFYFEAGQGKTPLGVL 151
           GKFFDPL FAGT+++GVYI D EKLERLKLAEIKH+R+AM+AMLIFYFEAGQGKTPLG L
Sbjct: 194 GKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGAL 253

Query: 150 GL 145
           GL
Sbjct: 254 GL 255


>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
           [Vitis vinifera] gi|147804704|emb|CAN71620.1|
           hypothetical protein VITISV_015544 [Vitis vinifera]
          Length = 257

 Score =  419 bits (1076), Expect = e-115
 Identities = 199/242 (82%), Positives = 221/242 (91%), Gaps = 3/242 (1%)
 Frame = -1

Query: 861 FLSGKKGTKCLLASSITG-GRVGVLSPRKFVI--SAQKKSWLPGVKAGGNLVDPEWLDGS 691
           FL+G K ++ LL++ +       V +PR+ ++  +A KKSWLPGVKAGGNLVDPEWLDGS
Sbjct: 16  FLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGVKAGGNLVDPEWLDGS 75

Query: 690 LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMTAVLGIFVGQAYSGIPWFEAGADPGA 511
           LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIFVGQA+SGIPWFEAGA PGA
Sbjct: 76  LPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGAAPGA 135

Query: 510 IAPFSFGSLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRTSENFANATGEQGYPG 331
           +APFSFG+LLGTQL+LMGWVESKRWVDFFNPESQSVEWATPWSRT+ENFANATGEQGYPG
Sbjct: 136 VAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPG 195

Query: 330 GKFFDPLSFAGTIQNGVYIPDEEKLERLKLAEIKHSRLAMVAMLIFYFEAGQGKTPLGVL 151
           GKFFDPLS AGTI++GVYIPD EKLERLKLAEIKH+R+AM+AMLIFYFEAGQGKTPLG L
Sbjct: 196 GKFFDPLSLAGTIKDGVYIPDVEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGAL 255

Query: 150 GL 145
           GL
Sbjct: 256 GL 257