BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001483
         (1071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95986.1| unknown [Populus trichocarpa]                          315   9e-84
ref|XP_002321945.1| predicted protein [Populus trichocarpa] gi|2...   313   4e-83
ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloropl...   311   2e-82
ref|XP_002317839.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82
ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, ch...   310   3e-82

>gb|ABK95986.1| unknown [Populus trichocarpa]
          Length = 306

 Score =  315 bits (808), Expect = 9e-84
 Identities = 167/234 (71%), Positives = 192/234 (82%), Gaps = 7/234 (2%)
 Frame = +3

Query: 369  VKMSWDGPGLSSVKLIIQGKHLTLSDTVKKYVEDKVGKAVQKHTHLVREVDVRLSVRGDE 548
            ++MSWDGP LSSVKLIIQGKHL LSDTVKK+VEDKVGKAVQK +HLVR VDVRLSVRG E
Sbjct: 74   IRMSWDGP-LSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGE 132

Query: 549  L-KGQKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHM 725
            L KG ++RRCEVTLFTK+HGVVRAEEDAE+++ SIDLVSSIIQRKLRKIK+K+SDHGRHM
Sbjct: 133  LGKGPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHM 192

Query: 726  KGFNRLKVR----XXXXXXXXXXXXXXXXFDY--QLVRTKSFEMPPLTVAEALEQLELVH 887
            KGFNRLKVR                     DY  ++VRTK F+MPPLTV+EA+EQLE VH
Sbjct: 193  KGFNRLKVREPMHQVVVEDDADEVSQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVH 252

Query: 888  HDFYGFRNEETGEINIVYKRNHGGYGLIVPKGGGKSEKIEDLVVEQST*PSPLE 1049
            HDFYGFR+EETGEINI+YKR  GGYGLI+PKG G++E++E LVVE +  PS  E
Sbjct: 253  HDFYGFRDEETGEINIIYKRKAGGYGLIIPKGNGEAERLEPLVVEPAREPSLAE 306


>ref|XP_002321945.1| predicted protein [Populus trichocarpa] gi|222868941|gb|EEF06072.1|
            predicted protein [Populus trichocarpa]
          Length = 231

 Score =  313 bits (803), Expect = 4e-83
 Identities = 167/232 (71%), Positives = 190/232 (81%), Gaps = 7/232 (3%)
 Frame = +3

Query: 375  MSWDGPGLSSVKLIIQGKHLTLSDTVKKYVEDKVGKAVQKHTHLVREVDVRLSVRGDEL- 551
            MSWDGP LSSVKLIIQGKHL LSDTVKK+VEDKVGKAVQK +HLVR VDVRLSVRG EL 
Sbjct: 1    MSWDGP-LSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELG 59

Query: 552  KGQKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKG 731
            KG ++RRCEVTLFTK+HGVVRAEEDAE+++ SIDLVSSIIQRKLRKIK+K+SDHGRHMKG
Sbjct: 60   KGPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKG 119

Query: 732  FNRLKVR----XXXXXXXXXXXXXXXXFDY--QLVRTKSFEMPPLTVAEALEQLELVHHD 893
            FNRLKVR                     DY  ++VRTK F+MPPLTV+EA+EQLE VHHD
Sbjct: 120  FNRLKVREPMHQVVVEDDADEVSQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHD 179

Query: 894  FYGFRNEETGEINIVYKRNHGGYGLIVPKGGGKSEKIEDLVVEQST*PSPLE 1049
            FYGFR+EETGEINI+YKR  GGYGLI+PKG G++E++E LVVE +  PS  E
Sbjct: 180  FYGFRDEETGEINIIYKRKAGGYGLIIPKGNGEAERLEPLVVEPAREPSLAE 231


>ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Vitis
            vinifera]
          Length = 298

 Score =  311 bits (797), Expect = 2e-82
 Identities = 164/236 (69%), Positives = 189/236 (80%), Gaps = 6/236 (2%)
 Frame = +3

Query: 360  PQVVKMSWDGPGLSSVKLIIQGKHLTLSDTVKKYVEDKVGKAVQKHTHLVREVDVRLSVR 539
            P  V+MSWDGP LSSVKLI+QGK+L L+DTV+ +VE+KVGKAVQKH+HLVREVDVRLS+R
Sbjct: 64   PLAVRMSWDGP-LSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIR 122

Query: 540  GDEL-KGQKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHG 716
            G EL KG K+RRCEVTLFTKKHGVVRAEE AE+LYGSID+VSSIIQRKLRKIKEKDSDHG
Sbjct: 123  GGELGKGPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHG 182

Query: 717  RHMKGFNRLKVRXXXXXXXXXXXXXXXXFD-----YQLVRTKSFEMPPLTVAEALEQLEL 881
            RHMKGFNRLKVR                 +      ++VRTK F+MPPLTV EA+EQLE 
Sbjct: 183  RHMKGFNRLKVRDPETPLVEEEADVVPQKEDGDLINEIVRTKYFDMPPLTVPEAVEQLEN 242

Query: 882  VHHDFYGFRNEETGEINIVYKRNHGGYGLIVPKGGGKSEKIEDLVVEQST*PSPLE 1049
            V HDF+GFRNEETGEINI+YKR  GGYGLI+PK  GK+E++E +VV+    PS  E
Sbjct: 243  VDHDFFGFRNEETGEINILYKRKAGGYGLIIPKENGKTEELEPVVVKSDREPSLAE 298


>ref|XP_002317839.1| predicted protein [Populus trichocarpa] gi|222858512|gb|EEE96059.1|
            predicted protein [Populus trichocarpa]
          Length = 306

 Score =  311 bits (796), Expect = 2e-82
 Identities = 163/224 (72%), Positives = 185/224 (82%), Gaps = 6/224 (2%)
 Frame = +3

Query: 369  VKMSWDGPGLSSVKLIIQGKHLTLSDTVKKYVEDKVGKAVQKHTHLVREVDVRLSVRGDE 548
            VKMSWDGP L SVKLIIQGK+L L+DTVK++VEDKVGKAVQKH+HLVREVDVRLSVRG E
Sbjct: 75   VKMSWDGP-LHSVKLIIQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGGE 133

Query: 549  L-KGQKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHM 725
            L KG ++RRCEVTLFT +HGVVRAEEDAE++Y SIDLVSSIIQRKLRKIKEK+SDHGRHM
Sbjct: 134  LGKGPRIRRCEVTLFTNRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHM 193

Query: 726  KGFNRLKVRXXXXXXXXXXXXXXXXFDY-----QLVRTKSFEMPPLTVAEALEQLELVHH 890
            KGFNRLKVR                 +      ++VRTK F+MPPLTV+EA+EQLE V H
Sbjct: 194  KGFNRLKVREPVPQVVEGDADEVSQQEVEDSIEEVVRTKFFDMPPLTVSEAIEQLENVDH 253

Query: 891  DFYGFRNEETGEINIVYKRNHGGYGLIVPKGGGKSEKIEDLVVE 1022
            DFYGFRNEETGEINIVYKR  GGYGLI+PKG  ++E++E LVVE
Sbjct: 254  DFYGFRNEETGEINIVYKRKAGGYGLIIPKGNDEAERLEPLVVE 297


>ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, chloroplast precursor,
            putative [Ricinus communis] gi|223536311|gb|EEF37962.1|
            Plastid-specific 30S ribosomal protein 1, chloroplast
            precursor, putative [Ricinus communis]
          Length = 311

 Score =  310 bits (795), Expect = 3e-82
 Identities = 165/236 (69%), Positives = 189/236 (80%), Gaps = 9/236 (3%)
 Frame = +3

Query: 369  VKMSWDGPGLSSVKLIIQGKHLTLSDTVKKYVEDKVGKAVQKHTHLVREVDVRLSVRGDE 548
            V+MSW+GP LSSVKLI QGK+L L+DTVKK+VEDKVGKAVQKH+HLVREVDVRLSVRG E
Sbjct: 77   VRMSWEGP-LSSVKLITQGKNLELTDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGGE 135

Query: 549  L-KGQKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHM 725
              KG K+RRCEVTLFTKKHGV+RAEEDAE++Y SIDLVSSIIQRKLRKIKEK SDHGRHM
Sbjct: 136  FGKGPKIRRCEVTLFTKKHGVIRAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHM 195

Query: 726  KGFNRLKVRXXXXXXXXXXXXXXXXF------DY--QLVRTKSFEMPPLTVAEALEQLEL 881
            KGFNRLKVR                       DY  ++VRTK F+MPPLTV+EA+EQL+ 
Sbjct: 196  KGFNRLKVREPVAEPVKDDTDEVDGVLGDEDEDYIDEVVRTKYFDMPPLTVSEAIEQLKN 255

Query: 882  VHHDFYGFRNEETGEINIVYKRNHGGYGLIVPKGGGKSEKIEDLVVEQST*PSPLE 1049
            V HDFYGFRNEETGEINI+YKR  GGYG+I+PK  GK+EK+E +V+E +  PS  E
Sbjct: 256  VDHDFYGFRNEETGEINIIYKRKAGGYGIIIPKENGKAEKLEPVVIEPAREPSIAE 311