BLASTX nr result
ID: Coptis23_contig00001473
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001473
(1505 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004155800.1| PREDICTED: cyclin-D-binding Myb-like transcr... 280 5e-73
ref|XP_004134338.1| PREDICTED: cyclin-D-binding Myb-like transcr... 273 7e-71
ref|XP_002322249.1| predicted protein [Populus trichocarpa] gi|2... 273 9e-71
ref|XP_002303776.1| predicted protein [Populus trichocarpa] gi|2... 269 2e-69
ref|XP_002282624.1| PREDICTED: uncharacterized protein LOC100260... 268 4e-69
>ref|XP_004155800.1| PREDICTED: cyclin-D-binding Myb-like transcription factor 1-like
[Cucumis sativus]
Length = 530
Score = 280 bits (717), Expect = 5e-73
Identities = 129/203 (63%), Positives = 160/203 (78%)
Frame = -2
Query: 778 EDLETIKKHHAKNGPDWRPLADELGKYRIHVKDAWRRMCLPNMKKGCWSQDEYQQLFDLV 599
E+ E ++K H +G DW+ LAD LGK+R HVKD WRR+ LPNMKKG W+QDEYQ+LFDLV
Sbjct: 328 EEYELVRKFHDTHGSDWKGLADVLGKHRFHVKDTWRRIKLPNMKKGQWTQDEYQKLFDLV 387
Query: 598 NMDLRMKISEEKKSKHGMLRDNIAWGAISSKLSTRSFAACCRKWYEQLESRLVREDKWAS 419
N DLR+K EEK+SKHGMLRDNI WGAIS LSTRS A CC+KWY QL S +V E++WA
Sbjct: 388 NKDLRLKAYEEKRSKHGMLRDNICWGAISDVLSTRSTALCCQKWYRQLTSPMVAENEWAD 447
Query: 418 SDDIRLLDALLAMDFSSLEEVDWDSLLDHRPGDLCRKRWCGMVNHLGKHGNKSFADQVEV 239
DD RL+DAL ++D S+E+V+WD LL+HR GD+CRKRW MV H+G +GNKSF++QVE+
Sbjct: 448 VDDYRLVDALSSLDACSIEDVEWDQLLEHRDGDVCRKRWSQMVKHIGDNGNKSFSEQVEI 507
Query: 238 LSKRYCGDVLEARAAYEERTPVD 170
LS+RY DVL+AR AY+ VD
Sbjct: 508 LSQRYSIDVLDAREAYDNAPVVD 530
Score = 91.3 bits (225), Expect = 6e-16
Identities = 43/97 (44%), Positives = 66/97 (68%)
Frame = -3
Query: 1215 KNINKGETRRKKKTGSADGAENTETRKSSKRVKFSEKVEVFPLLDVTDIEKENKEKGLVR 1036
+ + +G ++ + E + SSK+V+FSE VE+FPL+D + K ++ GL+R
Sbjct: 189 EKVQEGGAGLRENEEISSSPERQSPKGSSKKVRFSEDVEIFPLVDDQNSGKTKEDDGLIR 248
Query: 1035 GKRFSLEEDVIVKDAVFKFIKEHDLGDDGIEMVLRCK 925
GKRFS EED IVK AVF++I++H LGD+G++MVL C+
Sbjct: 249 GKRFSKEEDEIVKKAVFEYIEKHALGDEGLKMVLHCR 285
>ref|XP_004134338.1| PREDICTED: cyclin-D-binding Myb-like transcription factor 1-like
[Cucumis sativus]
Length = 537
Score = 273 bits (699), Expect = 7e-71
Identities = 125/193 (64%), Positives = 155/193 (80%)
Frame = -2
Query: 778 EDLETIKKHHAKNGPDWRPLADELGKYRIHVKDAWRRMCLPNMKKGCWSQDEYQQLFDLV 599
E+ E ++K H +G DW+ LAD LGK+R HVKD WRR+ LPNMKKG W+QDEYQ+LFDLV
Sbjct: 325 EEYELVRKFHDTHGSDWKGLADVLGKHRFHVKDTWRRIKLPNMKKGQWTQDEYQKLFDLV 384
Query: 598 NMDLRMKISEEKKSKHGMLRDNIAWGAISSKLSTRSFAACCRKWYEQLESRLVREDKWAS 419
N DLR+K EEK+SKHGMLRDNI WGAIS LSTRS A CC+KWY QL S +V E++WA
Sbjct: 385 NKDLRLKAYEEKRSKHGMLRDNICWGAISDVLSTRSTALCCQKWYRQLTSPMVAENEWAD 444
Query: 418 SDDIRLLDALLAMDFSSLEEVDWDSLLDHRPGDLCRKRWCGMVNHLGKHGNKSFADQVEV 239
DD RL+DAL ++D S+E+V+WD LL+HR GD+CRKRW MV H+G +GNKSF++QVE+
Sbjct: 445 VDDYRLVDALSSLDACSIEDVEWDQLLEHRDGDVCRKRWSQMVKHIGDNGNKSFSEQVEI 504
Query: 238 LSKRYCGDVLEAR 200
LS+RY DVL+AR
Sbjct: 505 LSQRYSIDVLDAR 517
Score = 91.3 bits (225), Expect = 6e-16
Identities = 43/97 (44%), Positives = 66/97 (68%)
Frame = -3
Query: 1215 KNINKGETRRKKKTGSADGAENTETRKSSKRVKFSEKVEVFPLLDVTDIEKENKEKGLVR 1036
+ + +G ++ + E + SSK+V+FSE VE+FPL+D + K ++ GL+R
Sbjct: 186 EKVQEGGAGLRENEEISSSPERQSPKGSSKKVRFSEDVEIFPLVDDQNSGKTKEDDGLIR 245
Query: 1035 GKRFSLEEDVIVKDAVFKFIKEHDLGDDGIEMVLRCK 925
GKRFS EED IVK AVF++I++H LGD+G++MVL C+
Sbjct: 246 GKRFSKEEDEIVKKAVFEYIEKHALGDEGLKMVLHCR 282
>ref|XP_002322249.1| predicted protein [Populus trichocarpa] gi|222869245|gb|EEF06376.1|
predicted protein [Populus trichocarpa]
Length = 538
Score = 273 bits (698), Expect = 9e-71
Identities = 128/202 (63%), Positives = 153/202 (75%)
Frame = -2
Query: 778 EDLETIKKHHAKNGPDWRPLADELGKYRIHVKDAWRRMCLPNMKKGCWSQDEYQQLFDLV 599
E+ E I+K H K+G DW+ LA+ LGK+R HVKD WRR+ L NMKKG WSQDEYQ LFD V
Sbjct: 336 EEYELIRKFHEKHGSDWKTLAEALGKHRFHVKDTWRRIKLINMKKGKWSQDEYQSLFDFV 395
Query: 598 NMDLRMKISEEKKSKHGMLRDNIAWGAISSKLSTRSFAACCRKWYEQLESRLVREDKWAS 419
N+DLR+K E+K+KHGMLRDNI+W AIS +L TR+ A CC+KWY+QL S +V E KW
Sbjct: 396 NLDLRLKAFVERKTKHGMLRDNISWTAISERLETRTDALCCQKWYDQLTSPMVAEGKWLD 455
Query: 418 SDDIRLLDALLAMDFSSLEEVDWDSLLDHRPGDLCRKRWCGMVNHLGKHGNKSFADQVEV 239
+DD RLL L +D +E+VDWD+LL+HR GDLCRKRW MV HLG H NKSFADQV+V
Sbjct: 456 TDDYRLLMELYDLDACCMEDVDWDNLLEHRSGDLCRKRWNQMVKHLGDHRNKSFADQVDV 515
Query: 238 LSKRYCGDVLEARAAYEERTPV 173
L KRYC DVLEAR AY + V
Sbjct: 516 LIKRYCPDVLEAREAYNSKPAV 537
Score = 84.0 bits (206), Expect = 1e-13
Identities = 45/94 (47%), Positives = 59/94 (62%)
Frame = -3
Query: 1206 NKGETRRKKKTGSADGAENTETRKSSKRVKFSEKVEVFPLLDVTDIEKENKEKGLVRGKR 1027
+K T+ +K + +E + ++ +SKRV F E VEVFP D EK E GLVRGKR
Sbjct: 200 SKRVTQMEKDVETTGPSEKSSSKATSKRVSFCEDVEVFPSSDGPSDEKAVGEDGLVRGKR 259
Query: 1026 FSLEEDVIVKDAVFKFIKEHDLGDDGIEMVLRCK 925
FS EED +VK+AV +I H LG +G+ MVL CK
Sbjct: 260 FSHEEDEMVKEAVLNYIDVHGLGAEGLNMVLNCK 293
>ref|XP_002303776.1| predicted protein [Populus trichocarpa] gi|222841208|gb|EEE78755.1|
predicted protein [Populus trichocarpa]
Length = 697
Score = 269 bits (687), Expect = 2e-69
Identities = 126/202 (62%), Positives = 152/202 (75%)
Frame = -2
Query: 778 EDLETIKKHHAKNGPDWRPLADELGKYRIHVKDAWRRMCLPNMKKGCWSQDEYQQLFDLV 599
E+ + I+K H K+G DW+ LA+ LGK+R HVKD WRR+ L NMKKG WSQDEYQ LFD V
Sbjct: 495 EEYDLIRKFHEKHGSDWKTLAEALGKHRFHVKDTWRRIKLINMKKGKWSQDEYQSLFDSV 554
Query: 598 NMDLRMKISEEKKSKHGMLRDNIAWGAISSKLSTRSFAACCRKWYEQLESRLVREDKWAS 419
N+DLR+K E+K+KHGMLRDNI+W AIS KL TR+ A CC+KWY+QL S +V E KW
Sbjct: 555 NLDLRLKAFVERKTKHGMLRDNISWTAISEKLETRTDALCCQKWYDQLTSPMVAEGKWLD 614
Query: 418 SDDIRLLDALLAMDFSSLEEVDWDSLLDHRPGDLCRKRWCGMVNHLGKHGNKSFADQVEV 239
+DD RLL L +D +E+VDWD+LL+HR G+LCRKRW MV HLG H NKSFADQV+V
Sbjct: 615 TDDYRLLMELYDLDACCMEDVDWDNLLEHRSGELCRKRWNQMVKHLGDHRNKSFADQVDV 674
Query: 238 LSKRYCGDVLEARAAYEERTPV 173
L RYC DVLEAR AY + V
Sbjct: 675 LINRYCHDVLEAREAYNSKPAV 696
Score = 81.6 bits (200), Expect = 5e-13
Identities = 43/90 (47%), Positives = 56/90 (62%)
Frame = -3
Query: 1194 TRRKKKTGSADGAENTETRKSSKRVKFSEKVEVFPLLDVTDIEKENKEKGLVRGKRFSLE 1015
T ++ S +E + ++ +SKRV F E VE+FP D +K E G VRGKRFSLE
Sbjct: 363 TEMEEDAESTRPSEKSLSKVTSKRVSFCEDVEIFPSSDGPSDKKAVGEDGFVRGKRFSLE 422
Query: 1014 EDVIVKDAVFKFIKEHDLGDDGIEMVLRCK 925
ED +VK+AV +I H LG DG+ MVL CK
Sbjct: 423 EDEMVKEAVLNYINVHGLGADGLNMVLNCK 452
>ref|XP_002282624.1| PREDICTED: uncharacterized protein LOC100260316 [Vitis vinifera]
Length = 686
Score = 268 bits (684), Expect = 4e-69
Identities = 123/202 (60%), Positives = 154/202 (76%)
Frame = -2
Query: 778 EDLETIKKHHAKNGPDWRPLADELGKYRIHVKDAWRRMCLPNMKKGCWSQDEYQQLFDLV 599
E+ E +++ H ++G +WR LAD LGK+R VKD WRR+ LPN KKG W Q+EYQ LFDLV
Sbjct: 484 EEYELVRRFHEQHGSEWRMLADALGKHRFQVKDTWRRIKLPNAKKGQWHQEEYQTLFDLV 543
Query: 598 NMDLRMKISEEKKSKHGMLRDNIAWGAISSKLSTRSFAACCRKWYEQLESRLVREDKWAS 419
NMDLRMK E+KSKHGMLRDNI+W AIS KL TR + CC KWY QL S +V + WA
Sbjct: 544 NMDLRMKALGERKSKHGMLRDNISWEAISDKLRTRISSGCCLKWYGQLTSSMVVQGNWAD 603
Query: 418 SDDIRLLDALLAMDFSSLEEVDWDSLLDHRPGDLCRKRWCGMVNHLGKHGNKSFADQVEV 239
+DD RLL+AL +D +E+VDWD+LLDHR G+LCRKRW M+ H+G + NKSFA+QVE+
Sbjct: 604 ADDYRLLNALFNLDACCMEDVDWDNLLDHRSGELCRKRWNQMIRHIGHYKNKSFAEQVEL 663
Query: 238 LSKRYCGDVLEARAAYEERTPV 173
LS+RYC D+LEAR AY+ + PV
Sbjct: 664 LSQRYCPDLLEAREAYDAKVPV 685
Score = 75.1 bits (183), Expect = 5e-11
Identities = 39/87 (44%), Positives = 58/87 (66%)
Frame = -3
Query: 1185 KKKTGSADGAENTETRKSSKRVKFSEKVEVFPLLDVTDIEKENKEKGLVRGKRFSLEEDV 1006
K+ +AD +E ++ ++ KRV+FS VEVFP D ++GLV+GKRFS EED
Sbjct: 363 KENVETADLSEKSKPDETPKRVRFSGHVEVFPSSD--------GQEGLVQGKRFSPEEDE 414
Query: 1005 IVKDAVFKFIKEHDLGDDGIEMVLRCK 925
+V+ AV +I++H LG++GI M+L CK
Sbjct: 415 MVRKAVLSYIEDHGLGEEGINMILNCK 441