BLASTX nr result
ID: Coptis23_contig00001469
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00001469 (2371 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI35079.3| unnamed protein product [Vitis vinifera] 869 0.0 emb|CBI35093.3| unnamed protein product [Vitis vinifera] 869 0.0 ref|XP_002264619.2| PREDICTED: THO complex subunit 1-like [Vitis... 868 0.0 ref|XP_002263874.1| PREDICTED: THO complex subunit 1-like [Vitis... 868 0.0 ref|XP_002529986.1| nuclear matrix protein, putative [Ricinus co... 849 0.0 >emb|CBI35079.3| unnamed protein product [Vitis vinifera] Length = 613 Score = 869 bits (2246), Expect = 0.0 Identities = 437/606 (72%), Positives = 490/606 (80%) Frame = -1 Query: 2200 VIDIFKTAILKSDSPENFALQTVQDAIKPQRQTVLVQDENQSLEXXXXXXXXXXXXXXXX 2021 +++IFK A+LK PE+FALQ VQ+AIKPQ+QT L QDENQ LE Sbjct: 12 LVEIFKQALLKPGPPESFALQVVQEAIKPQKQTKLAQDENQLLENI-------------- 57 Query: 2020 XXXXXXXXXXXXXXXXXXXXXALRTLLQELVSSAVQSGEQIMQYGRSIDDTESTHGQIPR 1841 LR LLQELVS AVQSGE+IMQYG+SIDD E+ QIPR Sbjct: 58 ----------------------LRKLLQELVSCAVQSGEKIMQYGQSIDDEEAIQSQIPR 95 Query: 1840 LLDIVLYLCEKGHVEGGMIFQLLEDLTEMSTMRDCKEVFGYIESKQDILGKQELFGRGKL 1661 LLDIVLYLCEK HVEGGMIFQLLEDLTEMSTMR+CK++F YIESKQDILGKQELF RGKL Sbjct: 96 LLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKDIFAYIESKQDILGKQELFARGKL 155 Query: 1660 VMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNISNETKYEKDSP 1481 VMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFN SNETKYEKD+P Sbjct: 156 VMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDAP 215 Query: 1480 AGISIDFNFYKTFWSLQEHFRNPATTTVATTKWHKFSSNLTVILDTFEAQPLSDDDGKAN 1301 GISIDFNFYKTFWSLQEHF NPA+ ++A TKW KF+SNL V+L+TFEAQPLSD++G AN Sbjct: 216 EGISIDFNFYKTFWSLQEHFCNPASISLAPTKWQKFTSNLMVVLNTFEAQPLSDEEGNAN 275 Query: 1300 NLEEEESAAFNIKYLTSSKLMGLELKDPSFRRDILVQCLILFDYLKAPGKNEKDGPSESM 1121 NLEEE +A F+IKYLTSSKLMGLELKDPSFRR ILVQCLILFDYLKAPGKN+KD PS+SM Sbjct: 276 NLEEE-AATFSIKYLTSSKLMGLELKDPSFRRHILVQCLILFDYLKAPGKNDKDLPSDSM 334 Query: 1120 KEEIKSCEERVKKLLELIPPNGKDFLHSIEHILERERNWVWWKRDGCPPFEKQPAEKKTG 941 KEEIKSCEERVKKLLE+ PP GK+FLH+IEHILERE+NWVWWKRDGCPPFE+QP EKK Sbjct: 335 KEEIKSCEERVKKLLEMTPPKGKEFLHNIEHILEREKNWVWWKRDGCPPFERQPIEKKAV 394 Query: 940 PDNVRKRKPRWRLGNKELHQLWKWADQHPNALTDPQRVRTPSITDYWKPLAEDMDDSAGI 761 D +KR+PRWR+GNKEL QLWKWADQ+PNALTDPQR RTP++++YWKPLAEDMD SAGI Sbjct: 395 QDGAKKRRPRWRMGNKELSQLWKWADQNPNALTDPQRARTPAVSEYWKPLAEDMDLSAGI 454 Query: 760 EAEYHHKNNKVYCWKGLRFSSRQDLEGFSRFADHGIEGXXXXXXXXXXVRSKYHNKPSDK 581 EAEYHHKNN+VYCWKGLRF++RQDL+GFSRF ++GIEG VRSKY KPSD+ Sbjct: 455 EAEYHHKNNRVYCWKGLRFAARQDLDGFSRFTEYGIEGVVPMELLPSDVRSKYQAKPSDR 514 Query: 580 SKRAKKEEETKESISHAEDNQITTSVTENDAGGISTELEDSTVPMDTEVNISESGDPTPE 401 SKRAKK EETK + AE+NQI T +E D G +LE S PMDT+V + PT + Sbjct: 515 SKRAKK-EETKGAAQQAEENQIATPASEIDGEGTRVDLEASAAPMDTDVTAT---TPTAD 570 Query: 400 ENQKLS 383 ENQK S Sbjct: 571 ENQKQS 576 >emb|CBI35093.3| unnamed protein product [Vitis vinifera] Length = 613 Score = 869 bits (2245), Expect = 0.0 Identities = 437/605 (72%), Positives = 488/605 (80%) Frame = -1 Query: 2197 IDIFKTAILKSDSPENFALQTVQDAIKPQRQTVLVQDENQSLEXXXXXXXXXXXXXXXXX 2018 ++IFK A+LK PE+FALQ VQ+AIKPQ+QT L QDENQ LE Sbjct: 13 VEIFKQALLKPGPPESFALQVVQEAIKPQKQTKLAQDENQLLENI--------------- 57 Query: 2017 XXXXXXXXXXXXXXXXXXXXALRTLLQELVSSAVQSGEQIMQYGRSIDDTESTHGQIPRL 1838 LR LLQELVS AVQSGE+IM YG+SIDD E+ QIPRL Sbjct: 58 ---------------------LRKLLQELVSCAVQSGEKIMHYGQSIDDEEAIQSQIPRL 96 Query: 1837 LDIVLYLCEKGHVEGGMIFQLLEDLTEMSTMRDCKEVFGYIESKQDILGKQELFGRGKLV 1658 LDIVLYLCEK HVEGGMIFQLLEDLTEMSTMR+CK++F YIESKQDILGKQELF RGKLV Sbjct: 97 LDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKDIFAYIESKQDILGKQELFARGKLV 156 Query: 1657 MLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNISNETKYEKDSPA 1478 MLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFN SNETKYEKD+P Sbjct: 157 MLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDAPE 216 Query: 1477 GISIDFNFYKTFWSLQEHFRNPATTTVATTKWHKFSSNLTVILDTFEAQPLSDDDGKANN 1298 GISIDFNFYKTFWSLQEHF NPA+ ++A TKW KF+SNL V+L+TFEAQPLSD++G ANN Sbjct: 217 GISIDFNFYKTFWSLQEHFCNPASISLAPTKWQKFTSNLMVVLNTFEAQPLSDEEGNANN 276 Query: 1297 LEEEESAAFNIKYLTSSKLMGLELKDPSFRRDILVQCLILFDYLKAPGKNEKDGPSESMK 1118 LEEE +A F+IKYLTSSKLMGLELKDPSFRR ILVQCLILFDYLKAPGKN+KD PS+SMK Sbjct: 277 LEEE-AATFSIKYLTSSKLMGLELKDPSFRRHILVQCLILFDYLKAPGKNDKDLPSDSMK 335 Query: 1117 EEIKSCEERVKKLLELIPPNGKDFLHSIEHILERERNWVWWKRDGCPPFEKQPAEKKTGP 938 EEIKSCEERVKKLLE PP GK+FLH+IEHILERE+NWVWWKRDGCPPFE+QP EKK Sbjct: 336 EEIKSCEERVKKLLETTPPKGKEFLHNIEHILEREKNWVWWKRDGCPPFERQPIEKKAVQ 395 Query: 937 DNVRKRKPRWRLGNKELHQLWKWADQHPNALTDPQRVRTPSITDYWKPLAEDMDDSAGIE 758 D +KR+PRWR+GNKEL QLWKWADQ+PNALTDPQRVRTP++++YWKPLAEDMD SAGIE Sbjct: 396 DGAKKRRPRWRMGNKELSQLWKWADQNPNALTDPQRVRTPAVSEYWKPLAEDMDSSAGIE 455 Query: 757 AEYHHKNNKVYCWKGLRFSSRQDLEGFSRFADHGIEGXXXXXXXXXXVRSKYHNKPSDKS 578 AEYHHKNN+VYCWKGLRF++RQDL+GFSRF ++GIEG VRSKY KPSD+S Sbjct: 456 AEYHHKNNRVYCWKGLRFAARQDLDGFSRFTEYGIEGVVPMELLPSDVRSKYQAKPSDRS 515 Query: 577 KRAKKEEETKESISHAEDNQITTSVTENDAGGISTELEDSTVPMDTEVNISESGDPTPEE 398 KRAKK EETK + AE+NQI T +E D G +LE S PMDT+V + PT +E Sbjct: 516 KRAKK-EETKGAAQQAEENQIATPASEIDGEGTRVDLEASAAPMDTDVTAT---TPTADE 571 Query: 397 NQKLS 383 NQK S Sbjct: 572 NQKQS 576 >ref|XP_002264619.2| PREDICTED: THO complex subunit 1-like [Vitis vinifera] Length = 601 Score = 868 bits (2243), Expect = 0.0 Identities = 437/605 (72%), Positives = 489/605 (80%) Frame = -1 Query: 2197 IDIFKTAILKSDSPENFALQTVQDAIKPQRQTVLVQDENQSLEXXXXXXXXXXXXXXXXX 2018 ++IFK A+LK PE+FALQ VQ+AIKPQ+QT L QDENQ LE Sbjct: 1 MEIFKQALLKPGPPESFALQVVQEAIKPQKQTKLAQDENQLLENI--------------- 45 Query: 2017 XXXXXXXXXXXXXXXXXXXXALRTLLQELVSSAVQSGEQIMQYGRSIDDTESTHGQIPRL 1838 LR LLQELVS AVQSGE+IMQYG+SIDD E+ QIPRL Sbjct: 46 ---------------------LRKLLQELVSCAVQSGEKIMQYGQSIDDEEAIQSQIPRL 84 Query: 1837 LDIVLYLCEKGHVEGGMIFQLLEDLTEMSTMRDCKEVFGYIESKQDILGKQELFGRGKLV 1658 LDIVLYLCEK HVEGGMIFQLLEDLTEMSTMR+CK++F YIESKQDILGKQELF RGKLV Sbjct: 85 LDIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKDIFAYIESKQDILGKQELFARGKLV 144 Query: 1657 MLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNISNETKYEKDSPA 1478 MLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFN SNETKYEKD+P Sbjct: 145 MLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDAPE 204 Query: 1477 GISIDFNFYKTFWSLQEHFRNPATTTVATTKWHKFSSNLTVILDTFEAQPLSDDDGKANN 1298 GISIDFNFYKTFWSLQEHF NPA+ ++A TKW KF+SNL V+L+TFEAQPLSD++G ANN Sbjct: 205 GISIDFNFYKTFWSLQEHFCNPASISLAPTKWQKFTSNLMVVLNTFEAQPLSDEEGNANN 264 Query: 1297 LEEEESAAFNIKYLTSSKLMGLELKDPSFRRDILVQCLILFDYLKAPGKNEKDGPSESMK 1118 LEEE +A F+IKYLTSSKLMGLELKDPSFRR ILVQCLILFDYLKAPGKN+KD PS+SMK Sbjct: 265 LEEE-AATFSIKYLTSSKLMGLELKDPSFRRHILVQCLILFDYLKAPGKNDKDLPSDSMK 323 Query: 1117 EEIKSCEERVKKLLELIPPNGKDFLHSIEHILERERNWVWWKRDGCPPFEKQPAEKKTGP 938 EEIKSCEERVKKLLE+ PP GK+FLH+IEHILERE+NWVWWKRDGCPPFE+QP EKK Sbjct: 324 EEIKSCEERVKKLLEMTPPKGKEFLHNIEHILEREKNWVWWKRDGCPPFERQPIEKKAVQ 383 Query: 937 DNVRKRKPRWRLGNKELHQLWKWADQHPNALTDPQRVRTPSITDYWKPLAEDMDDSAGIE 758 D +KR+PRWR+GNKEL QLWKWADQ+PNALTDPQR RTP++++YWKPLAEDMD SAGIE Sbjct: 384 DGAKKRRPRWRMGNKELSQLWKWADQNPNALTDPQRARTPAVSEYWKPLAEDMDLSAGIE 443 Query: 757 AEYHHKNNKVYCWKGLRFSSRQDLEGFSRFADHGIEGXXXXXXXXXXVRSKYHNKPSDKS 578 AEYHHKNN+VYCWKGLRF++RQDL+GFSRF ++GIEG VRSKY KPSD+S Sbjct: 444 AEYHHKNNRVYCWKGLRFAARQDLDGFSRFTEYGIEGVVPMELLPSDVRSKYQAKPSDRS 503 Query: 577 KRAKKEEETKESISHAEDNQITTSVTENDAGGISTELEDSTVPMDTEVNISESGDPTPEE 398 KRAKK EETK + AE+NQI T +E D G +LE S PMDT+V + PT +E Sbjct: 504 KRAKK-EETKGAAQQAEENQIATPASEIDGEGTRVDLEASAAPMDTDVTAT---TPTADE 559 Query: 397 NQKLS 383 NQK S Sbjct: 560 NQKQS 564 >ref|XP_002263874.1| PREDICTED: THO complex subunit 1-like [Vitis vinifera] Length = 607 Score = 868 bits (2242), Expect = 0.0 Identities = 437/604 (72%), Positives = 487/604 (80%) Frame = -1 Query: 2194 DIFKTAILKSDSPENFALQTVQDAIKPQRQTVLVQDENQSLEXXXXXXXXXXXXXXXXXX 2015 +IFK A+LK PE+FALQ VQ+AIKPQ+QT L QDENQ LE Sbjct: 8 EIFKQALLKPGPPESFALQVVQEAIKPQKQTKLAQDENQLLENI---------------- 51 Query: 2014 XXXXXXXXXXXXXXXXXXXALRTLLQELVSSAVQSGEQIMQYGRSIDDTESTHGQIPRLL 1835 LR LLQELVS AVQSGE+IM YG+SIDD E+ QIPRLL Sbjct: 52 --------------------LRKLLQELVSCAVQSGEKIMHYGQSIDDEEAIQSQIPRLL 91 Query: 1834 DIVLYLCEKGHVEGGMIFQLLEDLTEMSTMRDCKEVFGYIESKQDILGKQELFGRGKLVM 1655 DIVLYLCEK HVEGGMIFQLLEDLTEMSTMR+CK++F YIESKQDILGKQELF RGKLVM Sbjct: 92 DIVLYLCEKEHVEGGMIFQLLEDLTEMSTMRNCKDIFAYIESKQDILGKQELFARGKLVM 151 Query: 1654 LRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNISNETKYEKDSPAG 1475 LRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFN SNETKYEKD+P G Sbjct: 152 LRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDAPEG 211 Query: 1474 ISIDFNFYKTFWSLQEHFRNPATTTVATTKWHKFSSNLTVILDTFEAQPLSDDDGKANNL 1295 ISIDFNFYKTFWSLQEHF NPA+ ++A TKW KF+SNL V+L+TFEAQPLSD++G ANNL Sbjct: 212 ISIDFNFYKTFWSLQEHFCNPASISLAPTKWQKFTSNLMVVLNTFEAQPLSDEEGNANNL 271 Query: 1294 EEEESAAFNIKYLTSSKLMGLELKDPSFRRDILVQCLILFDYLKAPGKNEKDGPSESMKE 1115 EEE +A F+IKYLTSSKLMGLELKDPSFRR ILVQCLILFDYLKAPGKN+KD PS+SMKE Sbjct: 272 EEE-AATFSIKYLTSSKLMGLELKDPSFRRHILVQCLILFDYLKAPGKNDKDLPSDSMKE 330 Query: 1114 EIKSCEERVKKLLELIPPNGKDFLHSIEHILERERNWVWWKRDGCPPFEKQPAEKKTGPD 935 EIKSCEERVKKLLE PP GK+FLH+IEHILERE+NWVWWKRDGCPPFE+QP EKK D Sbjct: 331 EIKSCEERVKKLLETTPPKGKEFLHNIEHILEREKNWVWWKRDGCPPFERQPIEKKAVQD 390 Query: 934 NVRKRKPRWRLGNKELHQLWKWADQHPNALTDPQRVRTPSITDYWKPLAEDMDDSAGIEA 755 +KR+PRWR+GNKEL QLWKWADQ+PNALTDPQRVRTP++++YWKPLAEDMD SAGIEA Sbjct: 391 GAKKRRPRWRMGNKELSQLWKWADQNPNALTDPQRVRTPAVSEYWKPLAEDMDSSAGIEA 450 Query: 754 EYHHKNNKVYCWKGLRFSSRQDLEGFSRFADHGIEGXXXXXXXXXXVRSKYHNKPSDKSK 575 EYHHKNN+VYCWKGLRF++RQDL+GFSRF ++GIEG VRSKY KPSD+SK Sbjct: 451 EYHHKNNRVYCWKGLRFAARQDLDGFSRFTEYGIEGVVPMELLPSDVRSKYQAKPSDRSK 510 Query: 574 RAKKEEETKESISHAEDNQITTSVTENDAGGISTELEDSTVPMDTEVNISESGDPTPEEN 395 RAKK EETK + AE+NQI T +E D G +LE S PMDT+V + PT +EN Sbjct: 511 RAKK-EETKGAAQQAEENQIATPASEIDGEGTRVDLEASAAPMDTDVTAT---TPTADEN 566 Query: 394 QKLS 383 QK S Sbjct: 567 QKQS 570 >ref|XP_002529986.1| nuclear matrix protein, putative [Ricinus communis] gi|223530509|gb|EEF32391.1| nuclear matrix protein, putative [Ricinus communis] Length = 608 Score = 849 bits (2194), Expect = 0.0 Identities = 429/608 (70%), Positives = 484/608 (79%), Gaps = 5/608 (0%) Frame = -1 Query: 2188 FKTAILKSDSPENFALQTVQDAIKPQRQTVLVQDENQSLEXXXXXXXXXXXXXXXXXXXX 2009 FK AIL+ PENFALQTVQ+ IKPQRQT L QDENQ LE Sbjct: 4 FKNAILQPGPPENFALQTVQEFIKPQRQTKLAQDENQLLENM------------------ 45 Query: 2008 XXXXXXXXXXXXXXXXXALRTLLQELVSSAVQSGEQIMQYGRSIDDTESTHGQIPRLLDI 1829 LRTLLQELV+SAV SGEQIM YG+S+D+ E + GQIPRLLD+ Sbjct: 46 ------------------LRTLLQELVASAVHSGEQIMLYGQSVDEGEKSQGQIPRLLDV 87 Query: 1828 VLYLCEKGHVEGGMIFQLLEDLTEMSTMRDCKEVFGYIESKQDILGKQELFGRGKLVMLR 1649 VL+LCE+ HVEGGMIFQLLEDLTEMSTM++C+++FGYIESKQDILGKQELF RGKLVMLR Sbjct: 88 VLHLCEREHVEGGMIFQLLEDLTEMSTMKNCQDIFGYIESKQDILGKQELFARGKLVMLR 147 Query: 1648 TCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNISNETKYEKDSPAGIS 1469 TCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFN SNETKYEKD PAGIS Sbjct: 148 TCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVNIKGVFNTSNETKYEKDPPAGIS 207 Query: 1468 IDFNFYKTFWSLQEHFRNPATTTVATTKWHKFSSNLTVILDTFEAQPLSDDDGKANNLEE 1289 +DFNFYKT WSLQE+F NPA T+A TKWHKF+S+L V+L+TFEAQPLS+++G ANNLEE Sbjct: 208 VDFNFYKTLWSLQENFCNPAPLTLAPTKWHKFTSSLMVVLNTFEAQPLSEEEGDANNLEE 267 Query: 1288 EESAAFNIKYLTSSKLMGLELKDPSFRRDILVQCLILFDYLKAPGKNEKDGPSESMKEEI 1109 E +A FNIKYLTSSKLMGLELKDPSFRR ILVQCLILFDYLKAPGKN+KD SESMKE+I Sbjct: 268 E-AATFNIKYLTSSKLMGLELKDPSFRRHILVQCLILFDYLKAPGKNDKDSTSESMKEDI 326 Query: 1108 KSCEERVKKLLELIPPNGKDFLHSIEHILERERNWVWWKRDGCPPFEKQPAEKKTGPDNV 929 ++CEERVKKLLE+ PP GKDFL IEH+LERE+NWV WKRDGC PFEKQP E KT + Sbjct: 327 RTCEERVKKLLEMTPPKGKDFLQKIEHVLEREKNWVCWKRDGCQPFEKQPIENKTIQEGS 386 Query: 928 RKRKPRWRLGNKELHQLWKWADQHPNALTDPQRVRTPSITDYWKPLAEDMDDSAGIEAEY 749 +KRKPRWRLGNKEL QLWKWADQ+PNALTDPQRVRTP+IT+YWKPLAEDMD SAGIEAEY Sbjct: 387 KKRKPRWRLGNKELSQLWKWADQNPNALTDPQRVRTPAITEYWKPLAEDMDPSAGIEAEY 446 Query: 748 HHKNNKVYCWKGLRFSSRQDLEGFSRFADHGIEGXXXXXXXXXXVRSKYHNKPSDKSKRA 569 HHKNN+VYCWKGLRFS+RQDL+GFSRF DHGIEG VRSKY KP+D+SKRA Sbjct: 447 HHKNNRVYCWKGLRFSARQDLDGFSRFTDHGIEGVVPLELLPPDVRSKYQAKPNDRSKRA 506 Query: 568 KKEEETKESISHAEDNQITTSVTENDAGGISTELEDSTVPMDTEV-----NISESGDPTP 404 KK ++ K + E+NQI T +E D GI + E + PMDT+ + S+ G PTP Sbjct: 507 KK-DDIKGGSNQTEENQIATPASEIDGEGIRAD-EAAAAPMDTDAMATAGSTSQGGTPTP 564 Query: 403 EENQKLSP 380 +E Q+ SP Sbjct: 565 DERQRQSP 572