BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001466
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263938.1| PREDICTED: 40S ribosomal protein S29-like [V...   120   1e-25
ref|XP_002271801.1| PREDICTED: 40S ribosomal protein S29-like [V...   120   1e-25
ref|XP_002298768.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002302413.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
gb|ABK93425.1| unknown [Populus trichocarpa]                          117   7e-25

>ref|XP_002263938.1| PREDICTED: 40S ribosomal protein S29-like [Vitis vinifera]
          Length = 56

 Score =  120 bits (301), Expect = 1e-25
 Identities = 51/52 (98%), Positives = 52/52 (100%)
 Frame = -2

Query: 367 NVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 212
           NVWNSHPK+YGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 5   NVWNSHPKSYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56


>ref|XP_002271801.1| PREDICTED: 40S ribosomal protein S29-like [Vitis vinifera]
           gi|225444692|ref|XP_002277856.1| PREDICTED: 40S
           ribosomal protein S29-like isoform 1 [Vitis vinifera]
           gi|255538096|ref|XP_002510113.1| 40S ribosomal protein
           S29, putative [Ricinus communis]
           gi|356497504|ref|XP_003517600.1| PREDICTED: 40S
           ribosomal protein S29-like [Glycine max]
           gi|356536119|ref|XP_003536587.1| PREDICTED: 40S
           ribosomal protein S29 [Glycine max]
           gi|356538933|ref|XP_003537955.1| PREDICTED: 40S
           ribosomal protein S29-like isoform 1 [Glycine max]
           gi|356575720|ref|XP_003555985.1| PREDICTED: 40S
           ribosomal protein S29-like [Glycine max]
           gi|449438331|ref|XP_004136942.1| PREDICTED: 40S
           ribosomal protein S29-like [Cucumis sativus]
           gi|449447053|ref|XP_004141284.1| PREDICTED: 40S
           ribosomal protein S29-like [Cucumis sativus]
           gi|449469128|ref|XP_004152273.1| PREDICTED: 40S
           ribosomal protein S29-like [Cucumis sativus]
           gi|449484349|ref|XP_004156858.1| PREDICTED: 40S
           ribosomal protein S29-like [Cucumis sativus]
           gi|449508184|ref|XP_004163243.1| PREDICTED: 40S
           ribosomal protein S29-like [Cucumis sativus]
           gi|449520128|ref|XP_004167086.1| PREDICTED: 40S
           ribosomal protein S29-like [Cucumis sativus]
           gi|223550814|gb|EEF52300.1| 40S ribosomal protein S29,
           putative [Ricinus communis]
          Length = 56

 Score =  120 bits (300), Expect = 1e-25
 Identities = 51/52 (98%), Positives = 51/52 (98%)
 Frame = -2

Query: 367 NVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 212
           NVWNSHPK YGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 5   NVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56


>ref|XP_002298768.1| predicted protein [Populus trichocarpa] gi|222846026|gb|EEE83573.1|
           predicted protein [Populus trichocarpa]
          Length = 56

 Score =  119 bits (298), Expect = 3e-25
 Identities = 50/52 (96%), Positives = 51/52 (98%)
 Frame = -2

Query: 367 NVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 212
           NVWNSHPK YGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 5   NVWNSHPKNYGPGSRTCRVCGNPHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 56


>ref|XP_002302413.1| predicted protein [Populus trichocarpa]
           gi|224129898|ref|XP_002320698.1| predicted protein
           [Populus trichocarpa] gi|118482417|gb|ABK93131.1|
           unknown [Populus trichocarpa]
           gi|222844139|gb|EEE81686.1| predicted protein [Populus
           trichocarpa] gi|222861471|gb|EEE99013.1| predicted
           protein [Populus trichocarpa]
          Length = 56

 Score =  119 bits (297), Expect = 3e-25
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -2

Query: 367 NVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 212
           N+WNSHPK YGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 5   NIWNSHPKNYGPGSRTCRVCGNPHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 56


>gb|ABK93425.1| unknown [Populus trichocarpa]
          Length = 56

 Score =  117 bits (294), Expect = 7e-25
 Identities = 48/52 (92%), Positives = 51/52 (98%)
 Frame = -2

Query: 367 NVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 212
           N+WNSHP+ YGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 5   NIWNSHPRNYGPGSRTCRVCGNPHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 56