BLASTX nr result

ID: Coptis23_contig00001459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001459
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520165.1| conserved hypothetical protein [Ricinus comm...   211   2e-52
ref|XP_002311871.1| predicted protein [Populus trichocarpa] gi|2...   208   9e-52
gb|EEC75976.1| hypothetical protein OsI_13087 [Oryza sativa Indi...   205   8e-51
ref|XP_002274190.1| PREDICTED: tetratricopeptide repeat protein ...   205   8e-51
gb|AAT81727.1| expressed protein, having alternative splicing pr...   205   8e-51

>ref|XP_002520165.1| conserved hypothetical protein [Ricinus communis]
           gi|223540657|gb|EEF42220.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 453

 Score =  211 bits (536), Expect = 2e-52
 Identities = 100/181 (55%), Positives = 133/181 (73%)
 Frame = +2

Query: 2   RGQMDYFEDRLNIVADCVKNKSTWHLEWHLDLLILWALTNTNKLTIAEDLLEAMRLRICX 181
           +G+ D F+DRL I+AD VK+++ W+LEW LD+LILWAL  T +L+ AEDLL  ++ RI  
Sbjct: 272 QGEFDAFKDRLKILADRVKDEANWYLEWLLDVLILWALAKTGELSKAEDLLNGLKSRISK 331

Query: 182 XXXXXXXXXXXGIMLAEALYEYGKGSYEHAFGLLGPDFDANYCKVIGASDEQIDVFNEVW 361
                      G+ LAEALYEYG+G+ + A  +LGPDF+A  CK+IGASDEQ+DVFNEVW
Sbjct: 332 MNKKKQQLMQRGVQLAEALYEYGRGNNKQALDVLGPDFNAYDCKMIGASDEQLDVFNEVW 391

Query: 362 YSILLNTGRNLKAIEEIQKRLNKTEGLPFLWRLLERAYVLAGREDASDISEKARALEATY 541
           YS+LLNTG+  KAIE I++++ K EG PF+WRLLE+ Y + GR +A    EKA+ALE+ Y
Sbjct: 392 YSMLLNTGQATKAIEAIEEQIKKREGAPFMWRLLEKGYAMTGRHEAKVAGEKAKALESAY 451

Query: 542 F 544
           F
Sbjct: 452 F 452


>ref|XP_002311871.1| predicted protein [Populus trichocarpa] gi|222851691|gb|EEE89238.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  208 bits (530), Expect = 9e-52
 Identities = 99/181 (54%), Positives = 132/181 (72%)
 Frame = +2

Query: 2   RGQMDYFEDRLNIVADCVKNKSTWHLEWHLDLLILWALTNTNKLTIAEDLLEAMRLRICX 181
           RG++D F+DRLN +A C+ +++ W+LEWHLD+LILWAL  T + + AEDLLE ++ RI  
Sbjct: 288 RGELDIFDDRLNTLASCITDQANWYLEWHLDVLILWALAKTGEPSKAEDLLEGLKSRIQK 347

Query: 182 XXXXXXXXXXXGIMLAEALYEYGKGSYEHAFGLLGPDFDANYCKVIGASDEQIDVFNEVW 361
                       I LAEAL+EYG+G+ + A  LL  DFDAN CK++GASDEQ+DVFNEVW
Sbjct: 348 MSKKKQQRMQKVIRLAEALFEYGRGNDKQALDLLDSDFDANDCKMLGASDEQLDVFNEVW 407

Query: 362 YSILLNTGRNLKAIEEIQKRLNKTEGLPFLWRLLERAYVLAGREDASDISEKARALEATY 541
           YS+LLNTG+  KAI  ++K++ K EG PF+WRLLER Y + G ++A+   EKARALEA +
Sbjct: 408 YSMLLNTGQAAKAIGVMEKQIKKREGTPFMWRLLERGYAMTGSQEATVAGEKARALEAAH 467

Query: 542 F 544
           F
Sbjct: 468 F 468


>gb|EEC75976.1| hypothetical protein OsI_13087 [Oryza sativa Indica Group]
           gi|222625597|gb|EEE59729.1| hypothetical protein
           OsJ_12169 [Oryza sativa Japonica Group]
          Length = 454

 Score =  205 bits (522), Expect = 8e-51
 Identities = 99/181 (54%), Positives = 132/181 (72%), Gaps = 1/181 (0%)
 Frame = +2

Query: 2   RGQMDYFEDRLNIVADCVKNKSTWHLEWHLDLLILWALTNTNKLTIAEDLLEAMRLRICX 181
           RGQ+D  +DRL  + D + N+  WH+EW LDLL+LWAL++  ++T A++LLE++R R+  
Sbjct: 272 RGQVDLAKDRLAALLDALTNEKIWHVEWLLDLLVLWALSSMGEITRADNLLESLRSRVSS 331

Query: 182 XXXXXXXXXXXGIMLAEALYEYGKGSYEHAFGLLGPDFDANYCKVIGASDEQIDVFNEVW 361
                       I LAEA+YEYGKG ++  F +LGPDFDA  CK+IGASDEQ+DVFNEVW
Sbjct: 332 MDTKKQQVMQKAIQLAEAVYEYGKGEHKKVFDILGPDFDALSCKMIGASDEQVDVFNEVW 391

Query: 362 YSILLNTGRNLKAIEEIQKRLNKTEGLPFLWRLLERAYVLAGR-EDASDISEKARALEAT 538
           Y++L+NTG + +AIE ++K++ K EG PFLWRLLE+AY L GR  DAS  SEKA AL+A 
Sbjct: 392 YTVLINTGESSRAIEVLEKQIRKREGAPFLWRLLEKAYSLHGRAADASVASEKANALQAA 451

Query: 539 Y 541
           Y
Sbjct: 452 Y 452


>ref|XP_002274190.1| PREDICTED: tetratricopeptide repeat protein 38 [Vitis vinifera]
           gi|296086448|emb|CBI32037.3| unnamed protein product
           [Vitis vinifera]
          Length = 468

 Score =  205 bits (522), Expect = 8e-51
 Identities = 97/182 (53%), Positives = 131/182 (71%)
 Frame = +2

Query: 2   RGQMDYFEDRLNIVADCVKNKSTWHLEWHLDLLILWALTNTNKLTIAEDLLEAMRLRICX 181
           RG    FEDRL  +   + ++STW++EWHLDLL +WAL +T +L   E LL+ ++ R+  
Sbjct: 287 RGHAVVFEDRLKTLVSRLTDQSTWYIEWHLDLLTIWALASTGELVKTEALLQGLKSRLSR 346

Query: 182 XXXXXXXXXXXGIMLAEALYEYGKGSYEHAFGLLGPDFDANYCKVIGASDEQIDVFNEVW 361
                      GI+LAEALYEYG+G++  A  LLGPDF+AN+CK+IGASDEQ+DVFNE+W
Sbjct: 347 MSKKKQQTMQRGILLAEALYEYGRGNHIRALELLGPDFNANHCKMIGASDEQLDVFNELW 406

Query: 362 YSILLNTGRNLKAIEEIQKRLNKTEGLPFLWRLLERAYVLAGREDASDISEKARALEATY 541
           YS+LL+TG+  KAIE I+K++   EG+PFLWRLLER Y + G+++A    EKA ALE +Y
Sbjct: 407 YSMLLSTGQATKAIEVIEKQVKNREGVPFLWRLLERGYSMTGKQEARVAGEKAMALETSY 466

Query: 542 FK 547
           FK
Sbjct: 467 FK 468


>gb|AAT81727.1| expressed protein, having alternative splicing products [Oryza
           sativa Japonica Group]
          Length = 424

 Score =  205 bits (522), Expect = 8e-51
 Identities = 99/181 (54%), Positives = 132/181 (72%), Gaps = 1/181 (0%)
 Frame = +2

Query: 2   RGQMDYFEDRLNIVADCVKNKSTWHLEWHLDLLILWALTNTNKLTIAEDLLEAMRLRICX 181
           RGQ+D  +DRL  + D + N+  WH+EW LDLL+LWAL++  ++T A++LLE++R R+  
Sbjct: 242 RGQVDLAKDRLAALLDALTNEKIWHVEWLLDLLVLWALSSMGEITRADNLLESLRSRVSS 301

Query: 182 XXXXXXXXXXXGIMLAEALYEYGKGSYEHAFGLLGPDFDANYCKVIGASDEQIDVFNEVW 361
                       I LAEA+YEYGKG ++  F +LGPDFDA  CK+IGASDEQ+DVFNEVW
Sbjct: 302 MDTKKQQVMQKAIQLAEAVYEYGKGEHKKVFDILGPDFDALSCKMIGASDEQVDVFNEVW 361

Query: 362 YSILLNTGRNLKAIEEIQKRLNKTEGLPFLWRLLERAYVLAGR-EDASDISEKARALEAT 538
           Y++L+NTG + +AIE ++K++ K EG PFLWRLLE+AY L GR  DAS  SEKA AL+A 
Sbjct: 362 YTVLINTGESSRAIEVLEKQIRKREGAPFLWRLLEKAYSLHGRAADASVASEKANALQAA 421

Query: 539 Y 541
           Y
Sbjct: 422 Y 422


Top