BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001446
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526450.1| 60S ribosomal protein L3, putative [Ricinus ...   533   e-149
ref|XP_002331138.1| predicted protein [Populus trichocarpa] gi|2...   532   e-149
gb|ABK94156.1| unknown [Populus trichocarpa]                          531   e-149
ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis v...   531   e-149
ref|NP_176352.1| 60S ribosomal protein L3-2 [Arabidopsis thalian...   530   e-148

>ref|XP_002526450.1| 60S ribosomal protein L3, putative [Ricinus communis]
           gi|223534230|gb|EEF35945.1| 60S ribosomal protein L3,
           putative [Ricinus communis]
          Length = 389

 Score =  533 bits (1373), Expect = e-149
 Identities = 257/295 (87%), Positives = 268/295 (90%)
 Frame = +1

Query: 67  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPTKPCRLTAFLGYKAGMTHIVRDV 246
           MSHRKFEHPRHGSLGFLPRKRASR RGKVKAFP+DDP KPCRLTAFLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRQRGKVKAFPKDDPKKPCRLTAFLGYKAGMTHIVRDV 60

Query: 247 EKPGSKLHKKEACEAVTIVEAPPMIVVGVVGYVKTPRGLRSLCTVWAQHLNNEVRRRFYK 426
           EKPGSKLHKKE CEAVTI+E PPM+VVGVVGYVKTPRGLRSL TVWAQHL+ +V+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLNTVWAQHLSEDVKRRFYK 120

Query: 427 HWCXXXXXXXXXXXXXXETDEGKKDIQSQLEKMKKYCTVIRVLAHTQITKMKGLKQKKAH 606
           +WC              E++EGKKD Q QLEKMKKYCTVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKFESEEGKKDTQVQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180

Query: 607 LMEIQVNGGDTAKKVDFAYSFFEKPVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 786
           LMEIQVNGGD A+KVDFAYSFFEK VP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 787 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKADQES 951
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA  ES
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGHES 295


>ref|XP_002331138.1| predicted protein [Populus trichocarpa] gi|222872866|gb|EEF09997.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  532 bits (1370), Expect = e-149
 Identities = 252/295 (85%), Positives = 268/295 (90%)
 Frame = +1

Query: 67  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPTKPCRLTAFLGYKAGMTHIVRDV 246
           MSHRKFEHPRHGSLGFLPRKRASRHRGK K+FP+DDPTKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKAKSFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 247 EKPGSKLHKKEACEAVTIVEAPPMIVVGVVGYVKTPRGLRSLCTVWAQHLNNEVRRRFYK 426
           EKPGSKLHKKE CEAVTI+E PPM+VVGVVGYV TP GLRSL TVWAQHL+ EVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVNTPGGLRSLSTVWAQHLSEEVRRRFYK 120

Query: 427 HWCXXXXXXXXXXXXXXETDEGKKDIQSQLEKMKKYCTVIRVLAHTQITKMKGLKQKKAH 606
           +WC              E+++GKKDIQ+QLEK+KKYCTVIRVL HTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYCKKYESEDGKKDIQAQLEKLKKYCTVIRVLVHTQIRKMKGLKQKKAH 180

Query: 607 LMEIQVNGGDTAKKVDFAYSFFEKPVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 786
           LMEIQVNGGD AKKVDFAYSFFEK +P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDFAYSFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 787 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKADQES 951
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGK  QES
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKCGQES 295


>gb|ABK94156.1| unknown [Populus trichocarpa]
          Length = 389

 Score =  531 bits (1369), Expect = e-149
 Identities = 252/295 (85%), Positives = 269/295 (91%)
 Frame = +1

Query: 67  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPTKPCRLTAFLGYKAGMTHIVRDV 246
           MSHRKFEHPRHGSLGFLPRKRASRHRGK K+FP+DDPTKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKAKSFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60

Query: 247 EKPGSKLHKKEACEAVTIVEAPPMIVVGVVGYVKTPRGLRSLCTVWAQHLNNEVRRRFYK 426
           EKPGSKLHKKE CEAVTI+E PPM+VVGVVGYV TP GLRSL TVWAQHL+ EVRRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVNTPGGLRSLSTVWAQHLSEEVRRRFYK 120

Query: 427 HWCXXXXXXXXXXXXXXETDEGKKDIQSQLEKMKKYCTVIRVLAHTQITKMKGLKQKKAH 606
           +WC              E+++GKKDIQ+QLEK+KKYCTVIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYCKKYESEDGKKDIQAQLEKLKKYCTVIRVLAHTQIRKMKGLKQKKAH 180

Query: 607 LMEIQVNGGDTAKKVDFAYSFFEKPVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 786
           LMEIQVNGGD AKKVDFAYSFFEK +P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDFAYSFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 787 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKADQES 951
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE++KKIYKLGK  QES
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELSKKIYKLGKCGQES 295


>ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis vinifera]
           gi|297739519|emb|CBI29701.3| unnamed protein product
           [Vitis vinifera]
          Length = 389

 Score =  531 bits (1368), Expect = e-149
 Identities = 251/295 (85%), Positives = 269/295 (91%)
 Frame = +1

Query: 67  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPTKPCRLTAFLGYKAGMTHIVRDV 246
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DDPT PCRLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTNPCRLTAFLGYKAGMTHIVREV 60

Query: 247 EKPGSKLHKKEACEAVTIVEAPPMIVVGVVGYVKTPRGLRSLCTVWAQHLNNEVRRRFYK 426
           EKPGSKLHKKE CEAVTI+E PPM+VVGVVGY+KTPRGLRSL TVWAQHL+ EV+RRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 427 HWCXXXXXXXXXXXXXXETDEGKKDIQSQLEKMKKYCTVIRVLAHTQITKMKGLKQKKAH 606
           +WC              E+++GKKDIQ+QLEKMKKYC VIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180

Query: 607 LMEIQVNGGDTAKKVDFAYSFFEKPVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 786
           LMEIQVNGGD AKKVD+AY FFEK +P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 787 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKADQES 951
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK  QES
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQES 295


>ref|NP_176352.1| 60S ribosomal protein L3-2 [Arabidopsis thaliana]
           gi|21542436|sp|P22738.4|RL32_ARATH RecName: Full=60S
           ribosomal protein L3-2
           gi|4585874|gb|AAD25547.1|AC005850_4 60s ribosomal
           protein L3 [Arabidopsis thaliana]
           gi|28392966|gb|AAO41918.1| putative ribosomal protein
           [Arabidopsis thaliana] gi|28973595|gb|AAO64122.1|
           putative ribosomal protein [Arabidopsis thaliana]
           gi|332195738|gb|AEE33859.1| 60S ribosomal protein L3-2
           [Arabidopsis thaliana]
          Length = 390

 Score =  530 bits (1366), Expect = e-148
 Identities = 252/295 (85%), Positives = 269/295 (91%)
 Frame = +1

Query: 67  MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDPTKPCRLTAFLGYKAGMTHIVRDV 246
           MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DDPTKPCRLT+FLGYKAGMTHIVRDV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 247 EKPGSKLHKKEACEAVTIVEAPPMIVVGVVGYVKTPRGLRSLCTVWAQHLNNEVRRRFYK 426
           EKPGSKLHKKE CEAVTI+E PPM+VVGVVGYVKTPRGLRSLCTVWAQHL+ E+RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 427 HWCXXXXXXXXXXXXXXETDEGKKDIQSQLEKMKKYCTVIRVLAHTQITKMKGLKQKKAH 606
           +W               ET+EGKKDIQSQLEKMKKYC+VIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 607 LMEIQVNGGDTAKKVDFAYSFFEKPVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 786
           L EIQ+NGGD AKKVD+A S FEK VPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 787 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKADQES 951
           LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y++GK  QE+
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQET 295