BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001426
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...   174   2e-41
emb|CBI27406.3| unnamed protein product [Vitis vinifera]              174   2e-41
ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   170   3e-40
ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat...   170   3e-40
ref|XP_002514579.1| pentatricopeptide repeat-containing protein,...   164   1e-38

>ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  174 bits (441), Expect = 2e-41
 Identities = 93/191 (48%), Positives = 123/191 (64%)
 Frame = -2

Query: 574 KTLISSLNPTQVDSIIHHFKNTKQDNSALLLFQXXXXXXXXXXXXXXSHFYISHILAGKY 395
           +TL S LN  QVD I+   +    D SAL LF                 F +SH++A K 
Sbjct: 72  QTLASVLNTHQVDQILLSLRVDNSD-SALFLFDLLRNEYGFRHSRVSW-FIVSHVVARKG 129

Query: 394 NLKDLHAILHSLLDNEGPGSAQLLCELLWREFKDCEYSGMVWNMLAKEYLKLEMVHDALF 215
             K+L  +L+ +++ EG GSA  LCELL   F+D + + +VW+MLA  Y + EMVHDALF
Sbjct: 130 QSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALF 189

Query: 214 VIGKMKDLKYQVSNTTYNSLLYNFRHTEMMWGIYNEMKVNGVVKSEYSNSIFIDGLCKQS 35
           V+ KMK L  QVS  TYNSLLYN RHT++MW +YNE+K +GV ++EY+N I IDGLC+QS
Sbjct: 190 VLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQS 249

Query: 34  RLKEAVEFFWE 2
           RL++AV F  E
Sbjct: 250 RLQDAVTFLRE 260


>emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  174 bits (441), Expect = 2e-41
 Identities = 93/191 (48%), Positives = 123/191 (64%)
 Frame = -2

Query: 574 KTLISSLNPTQVDSIIHHFKNTKQDNSALLLFQXXXXXXXXXXXXXXSHFYISHILAGKY 395
           +TL S LN  QVD I+   +    D SAL LF                 F +SH++A K 
Sbjct: 72  QTLASVLNTHQVDQILLSLRVDNSD-SALFLFDLLRNEYGFRHSRVSW-FIVSHVVARKG 129

Query: 394 NLKDLHAILHSLLDNEGPGSAQLLCELLWREFKDCEYSGMVWNMLAKEYLKLEMVHDALF 215
             K+L  +L+ +++ EG GSA  LCELL   F+D + + +VW+MLA  Y + EMVHDALF
Sbjct: 130 QSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYSRAEMVHDALF 189

Query: 214 VIGKMKDLKYQVSNTTYNSLLYNFRHTEMMWGIYNEMKVNGVVKSEYSNSIFIDGLCKQS 35
           V+ KMK L  QVS  TYNSLLYN RHT++MW +YNE+K +GV ++EY+N I IDGLC+QS
Sbjct: 190 VLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQS 249

Query: 34  RLKEAVEFFWE 2
           RL++AV F  E
Sbjct: 250 RLQDAVTFLRE 260


>ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  170 bits (431), Expect = 3e-40
 Identities = 83/188 (44%), Positives = 127/188 (67%)
 Frame = -2

Query: 574 KTLISSLNPTQVDSIIHHFKNTKQDNSALLLFQXXXXXXXXXXXXXXSHFYISHILAGKY 395
           +T++S+L+ T VD ++   +  K D    + F               S F +SHILAGK 
Sbjct: 74  RTVVSTLSETVVDGVLDRLRTLKPD--VAVAFFYFLINEYGFRHSIFSQFVVSHILAGKG 131

Query: 394 NLKDLHAILHSLLDNEGPGSAQLLCELLWREFKDCEYSGMVWNMLAKEYLKLEMVHDALF 215
             K+L +++ +L+ ++G GSA ++C+LL  +F++ + +G+VW+MLA  Y + EM+HDALF
Sbjct: 132 RFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALF 191

Query: 214 VIGKMKDLKYQVSNTTYNSLLYNFRHTEMMWGIYNEMKVNGVVKSEYSNSIFIDGLCKQS 35
           VI KMKDL +Q S  TYNSLL+N RHT++MW +YNE+KV+G  +SE + SI I GLC+QS
Sbjct: 192 VIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQS 251

Query: 34  RLKEAVEF 11
           +L++A+ F
Sbjct: 252 KLEDAISF 259


>ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  170 bits (431), Expect = 3e-40
 Identities = 83/188 (44%), Positives = 127/188 (67%)
 Frame = -2

Query: 574 KTLISSLNPTQVDSIIHHFKNTKQDNSALLLFQXXXXXXXXXXXXXXSHFYISHILAGKY 395
           +T++S+L+ T VD ++   +  K D    + F               S F +SHILAGK 
Sbjct: 74  RTVVSTLSETVVDGVLDRLRTLKPD--VAVAFFYFLINEYGFRHSIFSQFVVSHILAGKG 131

Query: 394 NLKDLHAILHSLLDNEGPGSAQLLCELLWREFKDCEYSGMVWNMLAKEYLKLEMVHDALF 215
             K+L +++ +L+ ++G GSA ++C+LL  +F++ + +G+VW+MLA  Y + EM+HDALF
Sbjct: 132 RFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALF 191

Query: 214 VIGKMKDLKYQVSNTTYNSLLYNFRHTEMMWGIYNEMKVNGVVKSEYSNSIFIDGLCKQS 35
           VI KMKDL +Q S  TYNSLL+N RHT++MW +YNE+KV+G  +SE + SI I GLC+QS
Sbjct: 192 VIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQS 251

Query: 34  RLKEAVEF 11
           +L++A+ F
Sbjct: 252 KLEDAISF 259


>ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546183|gb|EEF47685.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 840

 Score =  164 bits (416), Expect = 1e-38
 Identities = 89/189 (47%), Positives = 118/189 (62%)
 Frame = -2

Query: 574 KTLISSLNPTQVDSIIHHFKNTKQDNSALLLFQXXXXXXXXXXXXXXSHFYISHILAGKY 395
           K  I  LN +QVD II H     +D  + + F               S   +SH+LA K 
Sbjct: 83  KEKIFMLNHSQVDQIIEHLN--VEDADSAVDFYYLLSNEFGFQHSRFSRLVVSHVLARKK 140

Query: 394 NLKDLHAILHSLLDNEGPGSAQLLCELLWREFKDCEYSGMVWNMLAKEYLKLEMVHDALF 215
            L +L  +L  +L +EG GSA  LCELL   F+  + S +VW+MLA  Y +  MVHDALF
Sbjct: 141 RLNELRLVLDQMLLHEGSGSAPSLCELLLGSFRSWDSSNVVWDMLACAYSRSAMVHDALF 200

Query: 214 VIGKMKDLKYQVSNTTYNSLLYNFRHTEMMWGIYNEMKVNGVVKSEYSNSIFIDGLCKQS 35
           V+ KMKDL + VS  TYNSLLYN RH+ +MW +YNE+KV+G  +SEY++SI +DGLC+QS
Sbjct: 201 VLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQS 260

Query: 34  RLKEAVEFF 8
           R ++AV FF
Sbjct: 261 RFQDAVLFF 269