BLASTX nr result

ID: Coptis23_contig00001424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001424
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272569.1| PREDICTED: probable membrane-associated kina...   204   5e-50
emb|CBI34403.3| unnamed protein product [Vitis vinifera]              197   5e-48
ref|XP_002304523.1| predicted protein [Populus trichocarpa] gi|2...   197   5e-48
ref|XP_002298006.1| predicted protein [Populus trichocarpa] gi|2...   194   7e-47
ref|XP_002509875.1| conserved hypothetical protein [Ricinus comm...   175   3e-41

>ref|XP_002272569.1| PREDICTED: probable membrane-associated kinase regulator 2-like
            [Vitis vinifera]
          Length = 452

 Score =  204 bits (519), Expect = 5e-50
 Identities = 145/332 (43%), Positives = 169/332 (50%), Gaps = 44/332 (13%)
 Frame = +1

Query: 451  FTVDSSGSTGNRTDPNLTLSPSDDLFFKGRFVPXXXXXXXXXXXXXXXAHSNNNKLQFPG 630
            FT+ SSGS+G+RTDPNL+LSPSDDLFFKGR VP               +  N+   QFP 
Sbjct: 121  FTLSSSGSSGDRTDPNLSLSPSDDLFFKGRLVPIEPSSLVFNS-----SEPNSKGNQFPV 175

Query: 631  SFLKPATKLRVLMLGFKNKPKSEKIEPTK------------------------------- 717
            S LK ATK RV MLG K K KS  +E T+                               
Sbjct: 176  SLLKSATKFRVFMLGLK-KSKSSTVEKTESNGSASATPKQDKQESQGQPQPQPQSQSQPQ 234

Query: 718  -------KSFTVKFKVEEVPIVSLFTRDXXXXXXXXXXXXXXXXXXXXXXXXXX--RDSL 870
                   K FTVKFKVEEVPI+SLFTRD                            +D +
Sbjct: 235  QQKQQESKFFTVKFKVEEVPIMSLFTRDNSSRSSTGTTKAQKQNSDETASDEKRFSKDVM 294

Query: 871  HKYLKMVKQLNFRVSK---EKLGFSGQL-MSNLSSPTPLASPSKKADGEMKEGEVITSNV 1038
             KYLKMVK L  RVS+   EKL FSGQL + + + P P  +P+        + +      
Sbjct: 295  QKYLKMVKPLYVRVSRRYGEKLRFSGQLSLGSGAKPGPATAPAANQKTSPTKSKT----- 349

Query: 1039 VNAKNQKEGNLTAGLRNVRKHLGKXXXXXXXXXXXXXXXXXTQSRRHDDSLLQQQDGIQS 1218
               +  ++GN+ AGLR V KHLGK                  QSRR DDSLLQQQDGIQS
Sbjct: 350  ---EPDQDGNIPAGLRVVCKHLGKSRSASSAVAAVPSAPC--QSRRRDDSLLQQQDGIQS 404

Query: 1219 AILHCKRSFTASRESDSSALSRCASDPSHEKS 1314
            AILHCKRSF ASR+ DSS LSR  SDPSHEKS
Sbjct: 405  AILHCKRSFNASRDLDSSLLSRSVSDPSHEKS 436


>emb|CBI34403.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  197 bits (502), Expect = 5e-48
 Identities = 136/298 (45%), Positives = 163/298 (54%), Gaps = 10/298 (3%)
 Frame = +1

Query: 451  FTVDSSGSTGNRTDPNLTLSPSDDLFFKGRFVPXXXXXXXXXXXXXXXAHSNNNKLQFPG 630
            FT+ SSGS+G+RTDPNL+LSPSDDLFFKGR VP               +  N+   QFP 
Sbjct: 41   FTLSSSGSSGDRTDPNLSLSPSDDLFFKGRLVPIEPSSLVFNS-----SEPNSKGNQFPV 95

Query: 631  SFLKPATKLRVLMLGFKNKPKSEKIEPTKKSFTVKFKVEEVPIVSLFTRDXXXXXXXXXX 810
            S LK ATK RV MLG K K KS  +E T +S     K  +                    
Sbjct: 96   SLLKSATKFRVFMLGLK-KSKSSTVEKTDRSSRSNKKNSD-------------------- 134

Query: 811  XXXXXXXXXXXXXXXXRDSLHKYLKMVKQLNFRVSK---EKLGFSGQL-MSNLSSPTPLA 978
                            +D + KYLKMVK L  RVS+   EKL FSGQL + + + P P  
Sbjct: 135  ------ETASDEKRFSKDVMQKYLKMVKPLYVRVSRRYGEKLRFSGQLSLGSGAKPGPAT 188

Query: 979  SPS---KKADGEMK---EGEVITSNVVNAKNQKEGNLTAGLRNVRKHLGKXXXXXXXXXX 1140
            +P+   K +  + K   + +V  +  +NAK+QK+GN+ AGLR V KHLGK          
Sbjct: 189  APAANQKTSPTKSKTEPDQDVTETPAINAKSQKQGNIPAGLRVVCKHLGKSRSASSAVAA 248

Query: 1141 XXXXXXXTQSRRHDDSLLQQQDGIQSAILHCKRSFTASRESDSSALSRCASDPSHEKS 1314
                    QSRR DDSLLQQQDGIQSAILHCKRSF ASR+ DSS LSR  SDPSHEKS
Sbjct: 249  VPSAPC--QSRRRDDSLLQQQDGIQSAILHCKRSFNASRDLDSSLLSRSVSDPSHEKS 304


>ref|XP_002304523.1| predicted protein [Populus trichocarpa] gi|222841955|gb|EEE79502.1|
            predicted protein [Populus trichocarpa]
          Length = 357

 Score =  197 bits (502), Expect = 5e-48
 Identities = 151/337 (44%), Positives = 167/337 (49%), Gaps = 48/337 (14%)
 Frame = +1

Query: 448  DFTVDSSGSTGNRTDPNLTLSPSDDLFFKGRFVPXXXXXXXXXXXXXXXAHSNNNKLQFP 627
            +FT+ SS S+ +R D NL LSPSDDLFFKGR VP                  N+   QF 
Sbjct: 8    NFTL-SSASSNDRRDQNLALSPSDDLFFKGRLVPIESSSLEL----------NSKSSQFS 56

Query: 628  GSFLKPATKLRVLMLGFKNKP-------KSEKIEPT-------------------KKSFT 729
             S LK ATK RV M GFK KP       K+E   PT                    K FT
Sbjct: 57   VSLLKSATKFRVFMSGFKRKPNTTTTNEKTEANVPTLASAAPKQQGEKDEENGKQSKFFT 116

Query: 730  VKFKVEEVPIVSLFTRDXXXXXXXXXXXXXXXXXXXXXXXXXX---------RDSLHKYL 882
            VKFKVEEVPI+SLFTR+                                   +D + KYL
Sbjct: 117  VKFKVEEVPIMSLFTRENSKSIKSSQQKQSSAEESTASAAGAAFSDDKQKFSKDVMQKYL 176

Query: 883  KMVKQLNFRVSK---EKLGFSGQLM-------SNLSSPTPLASPSKKADGEMKE---GEV 1023
            K VK L  RVSK   EKL FSGQL        S   SP+ +A     AD   KE    E 
Sbjct: 177  KKVKPLYIRVSKRYGEKLKFSGQLSFGSGPKTSAPPSPSTVAQKPITADNGGKEKESAEA 236

Query: 1024 ITSNVVNAKNQKEGNLTAGLRNVRKHLGKXXXXXXXXXXXXXXXXXTQSRRHDDSLLQQQ 1203
             T  V + K  K+GNL AGLR V KHLGK                   +RR DDSLLQQQ
Sbjct: 237  PTVAVSSMKGPKQGNLPAGLRVVCKHLGKSRSASSAAVAAAPPVPVLSNRR-DDSLLQQQ 295

Query: 1204 DGIQSAILHCKRSFTASRESDSSALSRCASDPSHEKS 1314
            DGIQSAILHCKRSF ASR+SDSS LSR ASDPSHEKS
Sbjct: 296  DGIQSAILHCKRSFNASRDSDSSVLSRSASDPSHEKS 332


>ref|XP_002298006.1| predicted protein [Populus trichocarpa] gi|222845264|gb|EEE82811.1|
            predicted protein [Populus trichocarpa]
          Length = 470

 Score =  194 bits (492), Expect = 7e-47
 Identities = 143/338 (42%), Positives = 164/338 (48%), Gaps = 48/338 (14%)
 Frame = +1

Query: 445  MDFTVDSSGSTGNRTDPNLTLSPSDDLFFKGRFVPXXXXXXXXXXXXXXXAHSNNNKLQF 624
            ++FT+ SS S+ +R+D NL LSPSDDLFFKGR VP                  N+   QF
Sbjct: 118  INFTL-SSASSNDRSDLNLALSPSDDLFFKGRLVP----------IEPSSLEPNSKSSQF 166

Query: 625  PGSFLKPATKLRVLMLGFKNKP---------------------------KSEKIEPTKKS 723
              SFLK A K RV MLG K KP                           K E+     K 
Sbjct: 167  SVSFLKSAVKFRVFMLGLKKKPNTTTTNEKAEANVVPALASSTPELQGEKDEENGKQSKL 226

Query: 724  FTVKFKVEEVPIVSLFTRD--------XXXXXXXXXXXXXXXXXXXXXXXXXXRDSLHKY 879
            FTVKFKVEEVP++SLFTR+                                  +D + KY
Sbjct: 227  FTVKFKVEEVPVMSLFTRENSKSIKSSQKQNSTEESTASAVGVASSDEKLKFSKDVMQKY 286

Query: 880  LKMVKQLNFRVSK---EKLGFSGQLMSNLSSPTPLASP-------SKKADGEMKEGEVIT 1029
            L+ VK L  RVSK   EKL FSGQL       TP A P       +  AD   KE E + 
Sbjct: 287  LQKVKPLYIRVSKRYGEKLKFSGQLSLGSGQKTPTAPPLSTVTQKTTTADKVEKEKESVE 346

Query: 1030 S---NVVNAKNQKEGNLTAGLRNVRKHLGKXXXXXXXXXXXXXXXXXTQSRRHDDSLLQQ 1200
                 V + K +K+GNL +GLR V KHLGK                    RR DDSLLQQ
Sbjct: 347  DPAVAVTDHKGRKQGNLPSGLRVVCKHLGKRRSASAAAVAAAPPGPVLSERR-DDSLLQQ 405

Query: 1201 QDGIQSAILHCKRSFTASRESDSSALSRCASDPSHEKS 1314
             DGIQSAILHCKRSF ASR+SDSS LSR  SDPSHEKS
Sbjct: 406  HDGIQSAILHCKRSFNASRDSDSSVLSRSVSDPSHEKS 443


>ref|XP_002509875.1| conserved hypothetical protein [Ricinus communis]
            gi|223549774|gb|EEF51262.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 431

 Score =  175 bits (444), Expect = 3e-41
 Identities = 141/342 (41%), Positives = 166/342 (48%), Gaps = 54/342 (15%)
 Frame = +1

Query: 484  RTDPNLTLSPSDDLFFKGRFVPXXXXXXXXXXXXXXXAHSNNNKLQFPGSFLKPATKLRV 663
            R D ++++SPSDDLFFKGR VP               A   N+K QFP SFLK ATK RV
Sbjct: 100  RIDQDVSVSPSDDLFFKGRLVPIEPSSSSSCSSVIIDASEPNSKPQFPVSFLKSATKFRV 159

Query: 664  LMLGFK---------NKPKSE--------KIEPTKKS-----------------FTVKFK 741
             MLGFK         +KP SE           P K+S                 FTVKFK
Sbjct: 160  FMLGFKKSKLEKPVNDKPASEANNETAASSTSPNKQSQQQEDEKEEEATKQNRFFTVKFK 219

Query: 742  VEEVPIVSLFTRDXXXXXXXXXXXXXXXXXXXXXXXXXX------RDSLHKYLKM-VKQL 900
            VEEVPIVSLFTRD                                +D +  YLK  V+ L
Sbjct: 220  VEEVPIVSLFTRDNSKSANKSHKQTNIQETATAISAPSSDEKRFSKDVMQNYLKKKVRPL 279

Query: 901  NFRVSK---EKLGF---------SGQLMSNLSSPTPLASPSKKADGEMKEGEVITSNVVN 1044
              RVSK   +KL           S  + +  SSPT + +  K+ + E      IT+ V N
Sbjct: 280  YIRVSKRYADKLSSDSGPKQPPPSTAVTAQNSSPTTVIAEKKQPETE------ITAAVSN 333

Query: 1045 AKNQKEGNLTAGLRNVRKHLGKXXXXXXXXXXXXXXXXXTQSRRHDDSLLQQQDGIQSAI 1224
             K+ K+    AGLR V KHLGK                 + SRR DDSLLQQQDGIQSAI
Sbjct: 334  VKSLKQ----AGLRVVCKHLGKSRSASSAVAAAPS----SSSRRRDDSLLQQQDGIQSAI 385

Query: 1225 LHCKRSFTASRESDSSALSRCASDPSHEKS-KVANSSRTSLD 1347
            LHCKRSF ASR+ DSS LSR  SDPSHE S K +  ++ SLD
Sbjct: 386  LHCKRSFNASRDCDSSLLSRSVSDPSHELSRKSSGEAKVSLD 427


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