BLASTX nr result

ID: Coptis23_contig00001415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001415
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic ...   132   4e-29
ref|XP_003609972.1| 20 kDa chaperonin [Medicago truncatula] gi|3...   129   2e-28
gb|ACJ84537.1| unknown [Medicago truncatula] gi|388500526|gb|AFK...   129   2e-28
ref|XP_003609971.1| 20 kDa chaperonin [Medicago truncatula] gi|3...   129   2e-28
ref|XP_002324138.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28

>ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera]
           gi|50660327|gb|AAT80888.1| chloroplast chaperonin 21
           [Vitis vinifera] gi|297738526|emb|CBI27771.3| unnamed
           protein product [Vitis vinifera]
          Length = 251

 Score =  132 bits (331), Expect = 4e-29
 Identities = 72/112 (64%), Positives = 81/112 (72%)
 Frame = -2

Query: 336 KTLRKNKLEISVKVIS*PFPML*TVCLCIVVNIVFSLVV*TGAQIVYSKYAGTELEFDGS 157
           KT+ KNKL+I VK                           TGAQ+VYSKYAGTE+EF+GS
Sbjct: 104 KTIGKNKLDICVK---------------------------TGAQVVYSKYAGTEVEFNGS 136

Query: 156 THLLLKEDDIVGILETDEVKDLKPLNDRVLIKVAEAEQKTAGGLFLTEASKD 1
            HL+LKEDDIVGILETD+VKDLKPLNDRVLIKVAEAE+KTAGGL LTEASK+
Sbjct: 137 NHLILKEDDIVGILETDDVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEASKE 188


>ref|XP_003609972.1| 20 kDa chaperonin [Medicago truncatula] gi|355511027|gb|AES92169.1|
           20 kDa chaperonin [Medicago truncatula]
          Length = 207

 Score =  129 bits (324), Expect = 2e-28
 Identities = 70/112 (62%), Positives = 81/112 (72%)
 Frame = -2

Query: 336 KTLRKNKLEISVKVIS*PFPML*TVCLCIVVNIVFSLVV*TGAQIVYSKYAGTELEFDGS 157
           KT+ KNK++ISVK                            GAQ+VYSKYAGTE+EFDGS
Sbjct: 60  KTVGKNKVDISVKA---------------------------GAQVVYSKYAGTEVEFDGS 92

Query: 156 THLLLKEDDIVGILETDEVKDLKPLNDRVLIKVAEAEQKTAGGLFLTEASKD 1
            HL+LK++DIVGILET+EVKDLKPLNDRVLIKVAEAE+KTAGGL LTEA+KD
Sbjct: 93  KHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKD 144


>gb|ACJ84537.1| unknown [Medicago truncatula] gi|388500526|gb|AFK38329.1| unknown
           [Medicago truncatula]
          Length = 253

 Score =  129 bits (324), Expect = 2e-28
 Identities = 70/112 (62%), Positives = 81/112 (72%)
 Frame = -2

Query: 336 KTLRKNKLEISVKVIS*PFPML*TVCLCIVVNIVFSLVV*TGAQIVYSKYAGTELEFDGS 157
           KT+ KNK++ISVK                            GAQ+VYSKYAGTE+EFDGS
Sbjct: 106 KTVGKNKVDISVKA---------------------------GAQVVYSKYAGTEVEFDGS 138

Query: 156 THLLLKEDDIVGILETDEVKDLKPLNDRVLIKVAEAEQKTAGGLFLTEASKD 1
            HL+LK++DIVGILET+EVKDLKPLNDRVLIKVAEAE+KTAGGL LTEA+KD
Sbjct: 139 KHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKD 190


>ref|XP_003609971.1| 20 kDa chaperonin [Medicago truncatula] gi|355511026|gb|AES92168.1|
           20 kDa chaperonin [Medicago truncatula]
          Length = 253

 Score =  129 bits (324), Expect = 2e-28
 Identities = 70/112 (62%), Positives = 81/112 (72%)
 Frame = -2

Query: 336 KTLRKNKLEISVKVIS*PFPML*TVCLCIVVNIVFSLVV*TGAQIVYSKYAGTELEFDGS 157
           KT+ KNK++ISVK                            GAQ+VYSKYAGTE+EFDGS
Sbjct: 106 KTVGKNKVDISVKA---------------------------GAQVVYSKYAGTEVEFDGS 138

Query: 156 THLLLKEDDIVGILETDEVKDLKPLNDRVLIKVAEAEQKTAGGLFLTEASKD 1
            HL+LK++DIVGILET+EVKDLKPLNDRVLIKVAEAE+KTAGGL LTEA+KD
Sbjct: 139 KHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKD 190


>ref|XP_002324138.1| predicted protein [Populus trichocarpa] gi|222865572|gb|EEF02703.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  128 bits (322), Expect = 4e-28
 Identities = 69/112 (61%), Positives = 80/112 (71%)
 Frame = -2

Query: 336 KTLRKNKLEISVKVIS*PFPML*TVCLCIVVNIVFSLVV*TGAQIVYSKYAGTELEFDGS 157
           KT+ K KL+ISVK                           TG Q+VYSKYAGTE+EFDGS
Sbjct: 111 KTIGKAKLDISVK---------------------------TGTQVVYSKYAGTEVEFDGS 143

Query: 156 THLLLKEDDIVGILETDEVKDLKPLNDRVLIKVAEAEQKTAGGLFLTEASKD 1
           +HL+LKEDDIVGILETD++KDLKPLNDRV IKVAEAE+KTAGGL LTEA+K+
Sbjct: 144 SHLILKEDDIVGILETDDIKDLKPLNDRVFIKVAEAEEKTAGGLLLTEATKE 195


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