BLASTX nr result

ID: Coptis23_contig00001408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001408
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26223.3| unnamed protein product [Vitis vinifera]              437   e-120
ref|XP_002281606.1| PREDICTED: chloride channel protein CLC-d [V...   437   e-120
ref|XP_002517213.1| chloride channel clc, putative [Ricinus comm...   423   e-116
ref|XP_003517583.1| PREDICTED: chloride channel protein CLC-d-li...   422   e-116
ref|XP_002315783.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...   421   e-116

>emb|CBI26223.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score =  437 bits (1123), Expect = e-120
 Identities = 217/248 (87%), Positives = 222/248 (89%)
 Frame = -1

Query: 746 VGYYVGVKWFFALLIGIGTGLAAVFINIAVENFAGWKFAATFSIIQKSYLAGFIVYILIN 567
           VGYYVGVKWFFALLIGIGTGLAAVFINI+VENFAGWKF  TFSIIQKSY+AGF+VYIL N
Sbjct: 67  VGYYVGVKWFFALLIGIGTGLAAVFINISVENFAGWKFQLTFSIIQKSYVAGFLVYILFN 126

Query: 566 LALVFSSVFIVTQFAPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKIFGSIGSVGGGLA 387
           L LVFSSV+IVTQFAPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKIFGSIGSVGGGLA
Sbjct: 127 LLLVFSSVYIVTQFAPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKIFGSIGSVGGGLA 186

Query: 386 LGKEGPLVHTGACIASLLGQGGSTKYHLSLRWLQVFKSDRDRRDLXXXXXXXXXXXXXXX 207
           LGKEGPLVHTGACIASL GQGGSTKYHLS RWLQVFKSDRDRRDL               
Sbjct: 187 LGKEGPLVHTGACIASLFGQGGSTKYHLSSRWLQVFKSDRDRRDLVTCGCAAGVAAAFRA 246

Query: 206 XXXXVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGSGGFIIWDI 27
               VLFALEEVTSWWRSQLMWRVFFTSA+VAVVVRTAMGWCKSGKCGHFGSGGFIIWDI
Sbjct: 247 PVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMGWCKSGKCGHFGSGGFIIWDI 306

Query: 26  SGGQEDYS 3
           S GQEDYS
Sbjct: 307 SDGQEDYS 314


>ref|XP_002281606.1| PREDICTED: chloride channel protein CLC-d [Vitis vinifera]
           gi|301318138|gb|ADK66984.1| chloride channel ClC6 [Vitis
           vinifera]
          Length = 771

 Score =  437 bits (1123), Expect = e-120
 Identities = 217/248 (87%), Positives = 222/248 (89%)
 Frame = -1

Query: 746 VGYYVGVKWFFALLIGIGTGLAAVFINIAVENFAGWKFAATFSIIQKSYLAGFIVYILIN 567
           VGYYVGVKWFFALLIGIGTGLAAVFINI+VENFAGWKF  TFSIIQKSY+AGF+VYIL N
Sbjct: 67  VGYYVGVKWFFALLIGIGTGLAAVFINISVENFAGWKFQLTFSIIQKSYVAGFLVYILFN 126

Query: 566 LALVFSSVFIVTQFAPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKIFGSIGSVGGGLA 387
           L LVFSSV+IVTQFAPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKIFGSIGSVGGGLA
Sbjct: 127 LLLVFSSVYIVTQFAPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKIFGSIGSVGGGLA 186

Query: 386 LGKEGPLVHTGACIASLLGQGGSTKYHLSLRWLQVFKSDRDRRDLXXXXXXXXXXXXXXX 207
           LGKEGPLVHTGACIASL GQGGSTKYHLS RWLQVFKSDRDRRDL               
Sbjct: 187 LGKEGPLVHTGACIASLFGQGGSTKYHLSSRWLQVFKSDRDRRDLVTCGCAAGVAAAFRA 246

Query: 206 XXXXVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGSGGFIIWDI 27
               VLFALEEVTSWWRSQLMWRVFFTSA+VAVVVRTAMGWCKSGKCGHFGSGGFIIWDI
Sbjct: 247 PVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMGWCKSGKCGHFGSGGFIIWDI 306

Query: 26  SGGQEDYS 3
           S GQEDYS
Sbjct: 307 SDGQEDYS 314


>ref|XP_002517213.1| chloride channel clc, putative [Ricinus communis]
           gi|223543848|gb|EEF45376.1| chloride channel clc,
           putative [Ricinus communis]
          Length = 794

 Score =  423 bits (1088), Expect = e-116
 Identities = 206/248 (83%), Positives = 219/248 (88%)
 Frame = -1

Query: 746 VGYYVGVKWFFALLIGIGTGLAAVFINIAVENFAGWKFAATFSIIQKSYLAGFIVYILIN 567
           +GYYV VKW FALLIGIGTGLAAVFIN++VENFAGWKF+ TFSIIQKSY AGF++Y+L N
Sbjct: 63  IGYYVAVKWLFALLIGIGTGLAAVFINLSVENFAGWKFSLTFSIIQKSYFAGFVLYVLFN 122

Query: 566 LALVFSSVFIVTQFAPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKIFGSIGSVGGGLA 387
           LALV+SSV+I+TQFAPAAAGSGIPEIKGYLNG+D  GILLFRTL+GKIFGSIGSVGGGLA
Sbjct: 123 LALVYSSVYIITQFAPAAAGSGIPEIKGYLNGIDIPGILLFRTLVGKIFGSIGSVGGGLA 182

Query: 386 LGKEGPLVHTGACIASLLGQGGSTKYHLSLRWLQVFKSDRDRRDLXXXXXXXXXXXXXXX 207
           LGKEGPLVHTGACIASLLGQGGSTKYHLS RWLQVFKSDRDRRDL               
Sbjct: 183 LGKEGPLVHTGACIASLLGQGGSTKYHLSSRWLQVFKSDRDRRDLVTCGCAAGVAAAFRA 242

Query: 206 XXXXVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGSGGFIIWDI 27
               VLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSG CGHFGSGGF+IWDI
Sbjct: 243 PVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGNCGHFGSGGFVIWDI 302

Query: 26  SGGQEDYS 3
           S GQEDYS
Sbjct: 303 SDGQEDYS 310


>ref|XP_003517583.1| PREDICTED: chloride channel protein CLC-d-like [Glycine max]
          Length = 801

 Score =  422 bits (1086), Expect = e-116
 Identities = 209/248 (84%), Positives = 219/248 (88%)
 Frame = -1

Query: 746 VGYYVGVKWFFALLIGIGTGLAAVFINIAVENFAGWKFAATFSIIQKSYLAGFIVYILIN 567
           V Y + VKWFFALLIGI TGLAAVFINIAVENFAGWKF+ TF+IIQKSY+AGF+VY+LIN
Sbjct: 69  VSYLLVVKWFFALLIGICTGLAAVFINIAVENFAGWKFSVTFNIIQKSYIAGFVVYVLIN 128

Query: 566 LALVFSSVFIVTQFAPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKIFGSIGSVGGGLA 387
           LALVFSSV+I+TQFAPAAAGSGIPEIKGYLNGVD HGILLFRTLIGKIFGSIGSVGGGLA
Sbjct: 129 LALVFSSVYIITQFAPAAAGSGIPEIKGYLNGVDIHGILLFRTLIGKIFGSIGSVGGGLA 188

Query: 386 LGKEGPLVHTGACIASLLGQGGSTKYHLSLRWLQVFKSDRDRRDLXXXXXXXXXXXXXXX 207
           LGKEGPLVHTGACIASLLGQGGSTKYHL+ RW QVFKSDRDRRDL               
Sbjct: 189 LGKEGPLVHTGACIASLLGQGGSTKYHLNSRWFQVFKSDRDRRDLVTCGCAAGVAAAFRA 248

Query: 206 XXXXVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGSGGFIIWDI 27
               VLFALEEVTSWWRSQLMWRVFFTSA+VAVVVR AMGWCKSGKCGHFGSGGFIIWDI
Sbjct: 249 PVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRAAMGWCKSGKCGHFGSGGFIIWDI 308

Query: 26  SGGQEDYS 3
           S GQEDYS
Sbjct: 309 SDGQEDYS 316


>ref|XP_002315783.1| Cl-channel clc-7 [Populus trichocarpa] gi|222864823|gb|EEF01954.1|
           Cl-channel clc-7 [Populus trichocarpa]
          Length = 752

 Score =  421 bits (1083), Expect = e-116
 Identities = 209/248 (84%), Positives = 218/248 (87%)
 Frame = -1

Query: 746 VGYYVGVKWFFALLIGIGTGLAAVFINIAVENFAGWKFAATFSIIQKSYLAGFIVYILIN 567
           VGY V VKWF ALLIGIGTGLAAVFINI+VENFAGWKF+ TFSIIQ+SY AGF++Y+LIN
Sbjct: 67  VGYQVVVKWFLALLIGIGTGLAAVFINISVENFAGWKFSLTFSIIQRSYFAGFVIYVLIN 126

Query: 566 LALVFSSVFIVTQFAPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKIFGSIGSVGGGLA 387
           L LVFSSV+IVT FAPAAAGSGIPEIKGYLNG+D  GILLFRTLIGKIFGSIGSVGGGLA
Sbjct: 127 LVLVFSSVYIVTHFAPAAAGSGIPEIKGYLNGLDIPGILLFRTLIGKIFGSIGSVGGGLA 186

Query: 386 LGKEGPLVHTGACIASLLGQGGSTKYHLSLRWLQVFKSDRDRRDLXXXXXXXXXXXXXXX 207
           LGKEGPLVHTGACIASLLGQGGSTKYHLSLRWLQVFKSDRDRRDL               
Sbjct: 187 LGKEGPLVHTGACIASLLGQGGSTKYHLSLRWLQVFKSDRDRRDLVTCGCAAGVAAAFRA 246

Query: 206 XXXXVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGSGGFIIWDI 27
               VLFALEEVTSWWRSQLMWRVFFTSA+VAVVVRTAMGWCKSGKCGHFGSGGFIIWD 
Sbjct: 247 PVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMGWCKSGKCGHFGSGGFIIWDT 306

Query: 26  SGGQEDYS 3
           S GQEDYS
Sbjct: 307 SDGQEDYS 314


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